Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  ---------->DOF2                            --------->ANAC58                            --------->ANAC58                            --------->GLK1(2)                  --------->LBD16                                      <---------ARR11(3)                 <---------HSFB2a(2)           --------->ZAT14         --------->ARR11(3)      <---------ICU4 --------->GLK1(1)     <-----------GT1             <---------GLK1(2) <----------DOF2 --------->HSFB2a(2)   <---------DAG2     --------->At4g35610 <-----------GT1 --ICU4          <---------HSFC1(1)    <----------DOF2--------->YAB1  <---------RVE1(1)   tcgcttaatctttgctattccagaaatcaaacgaaaaatcgctttttagtatacactaatagctgcaaacagagattttgtaactgatcaaatccaaact  11058700                                                                                      --------->bZIP60(1)                                                                                      <---------bZIP60(2)                                                                                      <---------bZIP60(1)                                                                                      --------->O2                                                                                      <---------ANAC55(1)                                                                                      --------->ANAC55(2)                                                                                      <---------ANAC58                                                                                      <---------ANAC55(2)                                  --------->GLK1(2)                                   <---------ANAC46                               --------->ANAC58                                       --------->TGA1a                        --------->ANAC58                                              <---------O2                        --------->ANAC46                                              <---------ANAC58                        --------->ANAC58                                              <---------TGA1a                        --------->ANAC55(1)                                          <---------------                     --------->ARR14(2)                                              ----------->STF1           ----------------------->TaNAC69(2)                                      ----------->HVH21        --------->ARR11(3)     --------->ANAC58                         --------->YAB1===============        <---------ARR11(3) ----------->RAV1(1)              ----------->RAV1(1)    ----------->TGA1   --------->ANAC46  <---------ARR14(2)            ----------->GT1     <------ZmHOX2a(2)   catacacgaagaacttaagcatgtatacgccacaagaatcgagcgaaaatagatggctaaacccacattttcgatcagaaacgaagtgacgtgaacatct  11058800               --------->YAB1                 <---------AHL20(1)               --------->AHL20(2)             <---------AHL20(2)              <---------ATHB12   --------->ARR14(2)            --------->WOX13(1)   <---------ARR14(2)                                       --------->TOE2(3)          ------>ZmHOX2a(1)    ----------->GT1--------->AHL20(1)                    ----------->GT1         --------->TOE2(3)---------->DOF2    --------->AHL20(2)                 --------->ARR14(2) --------TaNAC69(2)  --------->ATHB12  --------->ANAC46 --------->GLK1(2)       <---------ARR14(2) ====================================bZIP_DOF--------->YAB1                 <-----------------AGL1   aatcggtttatcctcaatcaaattgattaaaagcggaaactacacaattatattggataatctgagggattttagtagatcgaatatggtaacatcaaaa  11058900                                                        ----------->GT1                                                        <------MYB83               --------->ANAC58     --------->YAB1      <------MYB46(1) --------->ANAC58               --------->ANAC58   --------->ARR11(3)--------->ZAT2 --------->YAB1               ------>ZmHOX2a(2)  <---------ARR11(3)<---------HSFC1(2)  --------->ANAC58        -----              <------ZmHOX2a(2) ----------->GT1     --------->HSFC1(2)---------->DOF2       ---------    <-----------ARR10       <---------TOE2(3)       <---------ZAT2<------ZmHOX2a(2)         ---------   acagcgaagctaagcgatcgcaatggaatgaaggaagataataactagtagcgaagcttggtgaaacgatcacaaagcaaattgagggatagagaagcaa  11059000                                               --------->At4g35610                                               <---------At4g35610                                               --------->ZAT2                                      <---------TGA1a                                      <---------O2                                      --------->TGA1a                                      --------->O2                                      <---------ANAC58                                      <---------ANAC58                                      <---------ANAC46                                      <---------ANAC55(2)                               --------->GLK1(2)                               ---------->DOF2                              --------->ARR14(2)                   ------>NtERF2                             <------ZmHOX2a(1) <---------ZAT2     --------->bZIP60(1)                        <---------HSFB2a(2)<---------ZAT2         --------->ANAC58           -------- ===============================================bZIP_DOF          <---------bZIP60(1)        <------- ---------->DOF2        --------->HSFB2a(2)<---------At4g35610    --------->ANAC46    --------->ANAC58 ---->MYB52(1)       --------->ARR14(2)    --------->At4g35610    --------->ANAC58    --------->ANAC58 >ANAC58             <---------ARR14(2)    --------->ZAT2       <---------ATERF1(1)<----------ID1 >ANAC58     ----------->HVH21<---------ARR14(2)        <---------HSFB2a(2)  <------ZmHOX2a(2)   acagaaagagaagaagggacctggttctggaggaatcgggacgtgagctagctgagttggagaagacgacgccatttcgatcaaagcgacgaaacagctc  11059100                                                          --------->ARR14(2)                                                          --------->GLK1(2)                                                          <---------ARR14(2)                                              <---------MYB46(3)                                              <---------ANAC58                                              --------->MYB52(2)                                    --------->MYB46(3)   <---------ARR14(2)                                   ------>MYB83          --------->ARR14(2)                                   ------>MYB46(1)    --------->ANAC58                                  --------->MYB52(1)  --------->ANAC55(1)                                 --------->AtMYB61    --------->ANAC58                                 --------->MYB46(3)   --------->ANAC46                             <-------TEIL----------------------->TaNAC69(2)                           <---------ARR14(2) <---------ANAC58     ----------->GT1    <----------DOF2        <---------GLK1(2)*TSS     --------->LBD16                             <--- ->At4g35610               --------->ARR14(2)<-------TEIL<---------GLK1(2)          --------->CCA1(2) --At4g35610    --------->ZAT18 --------->MYB46(3)   <---------LBD16           ---------->DOF2   <---   tcacaacttttatttgaggggactgtccagattcaccaacggatgggttcgttcccacggaatcgggtttagtaaaaaaaaaaaagagatggtatttggg  11059200                                   <---------DAG2                                   <---------------AGL15                                  <---------ATERF1(1)          <----------DOF2          --------------->AGL15                              <------MYB83   <------------CBF                <----------DOF2         ---------->DOF2            <------MYB46(1) ------ANAC58         <----------DOF2                --------->AHL20(2)              --------->MYB59 ------ANAC58         <---------DAG2          ----------->GT1                   <---------AHL20(2)   cttgggattgggctttttaagaaacttttttgtaaaactttttttagttagtaaaaaaaatgaaagtagctcatttccttcttaaatttggtcgtctcca  11059300                                 <xxxxxxxxxxxxxxxxsmallRNA(i)                                <xxxxxxxxxxxxxxxxsmallRNA(i)                              --------->MYB52(1)                          --------->LBD16                                                          --   --------->ICU4        --------->ANAC46                                                          <-   <---------YAB1        --------->HSFB2a(2)                                                --------- ------->TEIL            <---------HSFB2a(2)                                       <----------DOF2<-- <-----------GT1        <---------LBD16                  <-----------GT1---------->DOF2   <---------LBD16   atgtaactattgttttagtgtgtttatccggaaaacggtctatttctccatgagaagtattacatcataccagatagagcccattctttgattccggtct  11059400                                                                                                -----                                                                                                -----                                                                                                -----             ---------->DOF2                                                               --------->ANAC46        <---------AHL20(2)                                                          <---------At4g35610 ------->ARR11(3)                                                                   ----------->GT1 --------ARR11(3)                                                  --------->LBD16  --------->At4g35610 >LBD16--------->AHL20(2)                                        <------NtERF2  <---------HSFB2a(2) -------CCA1(2)           ------>ZmHOX2a(1)                     ------>NtERF2   --------->HSFB2a(2)--   atatctctataaaatcaaagttttattcctgtttcccctcgaatagaaagttttatagcttaatgcccccgtactaaatgttcgagagctaaaaccccac  11059500                                                                --------->ANAC46                                                       ------>MYB46(1)                                                       ------>MYB83      --------->ANAC58        <---------AHL20(2)                           --------->TOE2(3)   --------->ANAC58       --------->AHL20(2)                     ------>MYB46(1)  <---------LBD16 ---->ANAC46                                  ------>MYB83--------->YAB1------->TEIL             <--- ---->ANAC58                    ----------->GT1      <---------MYB59<---------KAN4(2)           <---- ---->ANAC58                 --------->MYB52(1)<---------MYB52(2)--------->LBD16        --------->WRKY12 ----->TEIL               --------->ANAC46 --------->MYB46(3)<-----------GT1     <-----------GT1-----   gaagctagatttaatcggtttactatatacaaaaccgataaacaaaccaactaaacctaattgtaaccggaatgaacccaattttacccattgacttatt  11059600  Previous    Next  AGI:  At2g25910.1    Description:  3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25920.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82846.1); contains InterPro domain Polynucleotidyl transferase, Ribonuclease H fold; (InterPro:IPR012337); contains InterPro domain K Homology; (InterPro:IPR004087); contains InterPro domain 3' (InterPro:IPR002562); contains InterPro domain K Homology, type 1; (InterPro:IPR004088) Range:  from: 11056133    to: 11059144    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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