Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->YAB1                                                                           --------->MYB52(2)                                                                           <---------MYB46(3)                                                                           ----------->GT1                               <---------AHL20(2)                        <---------MYB52(1)        <-           --------->ZAT14     --------->AHL20(2)                      <---------ANAC58            <- ->ZmHOX2a(2)                  <---------AHL20(1)                      <---------ANAC58          ---- ---AGP1<----------DOF2       --------->AHL20(2)                      <---------TOE2(3)    ========== ---ARR11(3)               ------>ZmHOX2a(1)     <---------MYB111(1) <-----------GT1       ------>ZmHOX2a(1)   tgttttccttctttgcagtccaaaaattcctattaaattttctcttatgcaactacttgattttcttctatttacgtttgttaattcatcatcctctatt  11019200           <---------ANAC58           <---------ANAC58         <-----------GT1    --------->ATHB12    <---------ICU4   <---------YAB1   --------->ICU4                                       <---------YAB1   <---------ATHB12                                    --------->KAN4(2)  <---------TOE2(3)                                   <---------ICU4 --------->YAB1                                      <---------YAB1                              ---- --------WOX13(1) <-------GAMYB                     --------->ARR11(3)          --------->YAB1   ---- --------YAB1    <---------MYB46(3)                 <---------ARR11(3)      <---------AHL20(2)   <--- ----->ATHB12    ------>ZmHOX2a(2)                 --------->YAB1          --------->AHL20(2)   ----- =======================HOX2a_HOX2a               <---------YAB1 <---------ANAC46               <----   gattaatgatttttcttgatcgttgttacattggattggattgtaagagactatgatcattcttatgcagtggattataaaatgaaaatgaataacaaat  11019300                                                                       ----------->GT1       <---------AHL20(2)                                            <---------ATHB12       <---------AHL20(1)                                            --------->MYB46(3)       --------->AHL20(1)                                           ------>MYB46(1)       --------->AHL20(2)                                           ------>MYB83      <---------AHL20(2)                                            -------->P      --------->AHL20(2)                                       <---------ARR14(2) ----->ATHB12                         <---------CCA1(2)        --------->ARR14(2) ----->YAB1              --------->YAB1                        ------->TEIL ------ICU4            --------->GLK1(2)                 <-----------GT1             --------->YAB1 ---->ICU4         <-----------GT1<----------DOF2       <---------AHL20(2)        <----------DOF2 -----ATHB12      <-----------GT1 <---------DAG2       --------->AHL20(2)   <---------ALFIN1   <-----   cattacaaataaattagtttttaacaatctgaactactttatatccaatggaaacaatttaaacgtatccaaccagtaacacctctttgatattgaagga  11019400                 <---------ANAC46               --------->ZAT14               <---------ZAT14             <---------ZAT14             --------->ZAT18          <---------ZAT14        <---------ZAT14                        --------->ARR14(2)        ----------->GT1        --------->ZAT14                    --------->ANAC58             --------->DAG2    --------->YAB1       --------->YAB1    --------->ANAC58            ---------->DOF2 -ZmHOX2a(1) --------->ZAT14             <-----------GT1        <-----------HVH21               -----   cacaaatcagagtactgtactgtgtaagcatatttcaaatttgttacccaatctccaaaaacaatatgtcaaataaagtaatacatctcagaactcacta  11019500                                              <---------YAB1                                            <---------ICU4                                            --------->YAB1          ------->MYC2                                         --------->YAB1             <-------MYC2              <---------WRKY12      <---------ATHB12                ------->MYC3    *TSS         <---           --------->ANAC46       --------->WOX13(1)                <-------MYC3  ------>ZmHOX2a(1) <           --------->ANAC58     ------------>CBF      --------->AHL20(2)        --------------->AtSPL8 ----->DOF2--------->ANAC58     <---------ATHB12    --------->TOE2(3)      ------>ZmHOX2a(1) <-------   aagaacataatacaagtcaactttcgaaactcaaatcaatcactcatcatcatacattaatttcattccatgtgctccttagtccttaccattttctttt  11019600                                             <-------TEIL                 --------->YAB1           <---------HSFC1(2)           --------->TOE2(3)           <-    <----------DOF2                       --------->HSFC1(2)     --------->YAB1                   --- --------GT1 <---------YAB1       --------->YAB1        <---------ANAC55(2)                      <--- ----------DOF2  --------->AHL20(2) <---------YAB1      --------->ANAC58                         <--- ---DOF2  ------>ZmHOX2a(1)      <---------YAB1         --------->ANAC58                 --------->YAB1   cactttcttttccttacaattaaaaaaaaaaactcattataagtagcttcgttgtattacgcacaaatcacaacatcaactaaaccatatatcaaaattt  11019700                                                        --------->AtMYB61                                                       <------NtERF2                                                      ----------->RAV1(1)                            --------->ANAC58        <---------ZAT18                            --------->ANAC58        --------->ZAT18                        --------->YAB1    <------ZmHOX2a(2)           <----------DOF2---------->DOF2<---------ARR14(2) --------MYB52(1)     --------->AtLEC2   --------->ARR14(2)                        <----------DOF2 ------>TOE2(3)    <-------TEIL          --------->ARR11(3)                   --------->SPL7 ------ANAC58  <---------AHL20(2)        <---------ARR11(3)         --------->At4g35610 ------ANAC58 --------->AHL20(2) --------->AtLEC2--------->MYB59 <---------At4g35610  ---------->DOF2   cgttagattagaacttttaaattcattcaaaagccatgaagaagatcgagttagggcaccatagcgaagcggctaaaccggactgcattaaagccctcat  11019800                                            ------>ZmHOX2a(2)                                           <---------At4g35610                                           --------->At4g35610                                           <---------GLK1(1)                                          --------->ARR14(2)                                    -----                      <----------DOF2     <---------ARR14(2)                      <---------HSFB2a(2)                <----------DOF2           <---------AGP1                          --------->HSFB2a(2)               <---------DAG2             --------->ARR11(3)                <---------------AGL15         --------->ZAT6             <-----------RAV1(1)   ----------->GT1   --------------->AGL15<---         <---------ICU4             --------->ALFIN1      --------->YAB1   <-----------------AGL2<---   tgtcgaattcatcactacctttctctttgtcttcgctggtgttggatctgccatggccactggtaatttctcaggcttctatttctagcaaaccaagtag  11019900                                                   <---------AHL20(2)                                              --------->AHL20(2)                                              <---------AHL20(1)                                              <---------AHL20(2)                                              --------->AHL20(1)                                 <---                                             --------->AHL20(2)         <---------ZAT14          <--- ---->At4g35610          ------->TEIL        <---------AHL20(2)--------------------->WRI1<---------MYB46(3) ------ANAC58          <---------ZAT18    <------------------------ANAC81       --------->ARR14(2) ------ANAC58 --------->ZAT6      <-----------GT1  --------->AHL20(2)   --------->ZAT14 <---------AtMYB61   cttaacttggttcttgacactacgatgcacttcaatttacaacttaattttattttattcattttcttagacagtttagtcggaaacacattggtgggac  11020000                                                                                    <------NtERF2                                                                                    <---------MYB52(1)                                                                                   <-----------TGA1                                                                                   ------>NtERF2                                                                                   <---------ATERF1(1)                                                                                   <-----------HVH21                                                                                  --------->RAP2.3(2)                                                                                  --------->RRTF1(2)                                                                                  --------->RAP2.6(2)                                                                                  --------->RAP2.3(3)                                                                                  <---------ATERF1(2)                                                                                  --------->ATERF1(2)                                                                                  --------->ANAC46                                                                                  --------->O2                                                                                  --------->DEAR3(1)                                                                                  --------->RRTF1(3)                                                        --------->ARR14(2)       --------->ERF1                                                        --------->ARR11(3)       --------->RAP2.3(1)                                                        <-----------ARR10        <------NtERF2                                                   <---------PCF2               <---------ATERF1(1)                                                  ------>NtERF2                 ------>NtERF2                                                <---------ANAC58                --------->LBD16                                               --------->At4g35610     --------->AtMYB61                                           <---------ARR11(3)          --------->TOE2(3)              <------NtERF2                <---------ARR14(2)         --------->bZIP60(2)             ------>NtERF2                 --------->ARR14(2)        ------>NtERF2--------->bZIP60(1)             <---------MYB46(3)            --------->ARR11(3)       <---------ALFIN1----------->HVH21            --------->ALFIN1              <---------GLK1(1)    <---------MYB52(1)--------->RRTF1(1)         <------NtERF2                    --------->GLK1(1) <---------LBD16    --------->ANAC46         <---------DEAR3(1)             --------->YAB1  <---------ARR14(2)   ------->GAMYB        <------NtERF2                  --------->ICU4   <---------ARR11(3) ==========================        <---------LBD16                <---------YAB1   <---------ARR11(1) -------->P<---------ALFIN1      --------->ATERF1(1)          --------->At5g28300 <---------CCA1(2)  <---------ALFIN1     <-----------HVH21             <------NtERF2<---------ANAC58  <------NtERF2--------->DEAR3(1)  <---------LBD16           <-----------RAV1(1)<---------LBD16--------->LBD16======================== ------DAG2--------->At5g28300   <---------ANAC46--------->LBD16 <---------ATERF1(1)--------->ATERF1(1) -------DOF2<---------DEAR3(1)--------->ALFIN1<-----------RAV1(1)------>NtERF2<---------LBD16  ------   ttttcgcggtcgcggtggctcatgcattcgttgtggcggtaatgatatctgcgggccatatctccggtggccacctcaaccccgccgtcaccctcggtct  11020100  Previous    Next  AGI:  At2g25810.1    Description:  TIP4;1 (tonoplast intrinsic protein 4;1); water channel. Identical to Aquaporin TIP4-1 (TIP4-1) [Arabidopsis Thaliana] (GB:O82316;GB:Q53XD1); similar to GAMMA-TIP (Tonoplast intrinsic protein (TIP) gamma), water channel [Arabidopsis thaliana] (TAIR:AT2G36830.1); similar to aquaglyceroporin; tonoplast intrinsic protein (TIPa) [Nicotiana tabacum] (GB:CAB40742.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 11019584    to: 11021248    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version