Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       ------>MYB46(1)                                                                                     ------>MYB83                                                                                    --------->MYB55(1)                                                                                   <---------MYB111(2)                                                                                   <---------MYB46(2)                                                                                   <---------MYB111(1)                                                                                   <---------MYB59                                                                                  --------->ANAC55(2)                                                                                  --------->ANAC46               ------->TEIL     <-----------GT1                ------->GAMYB      <---------ANAC55(2)      --------->ANAC46------>ZmHOX2a(1)                       --------->MYB46(3)  --------->ANAC58 ---------->DOF2     --------->TOE2(3)                        <---------MYB52(2)  --------->ANAC58 ---->ZmHOX2a(1)<---------At4g35610                        --------->MYB46(3)     --------->ANAC55(1) >ZAT14     ------->GAMYB  --------->TOE2(3)--------------->AGL15               <---------ALFIN1    - -ZAT14  --------->MYB52(1)--------->YAB1   =========================================================   cctcaaagacacaactgcatcttcctcaatcttattacttccttcactactactagtatcaacaacaaacttcaacctctcaacacctaactccaaaaca  10979400                                                                   =========================HOX2a_HOX2a                                                                   ------>ZmHOX2a(1)             ----                                                            ------>ZmHOX2a(1)               ---------         --------->TOE2(3)         <-----------GT1          ================================HOX2a_HOX2a         --------->TOE1(3)     <---------GLK1(2)           --------->TOE2(3)                ---------      ------->GAMYB          --------->LBD16          <---------At4g35610             --------->YAB1     <---------ALFIN1----------------->AGL1           --------->At4g35610            <------ZmHOX2a(2) -------->AtLEC2     ----------------->AG ------>ZmHOX2a(1)--------->TOE1(3)       --------->WOX13(1) ======================================MADS_MADS   ------>ZmHOX2a(1)        --------->ZAT6 ----------   ccttgcaacacccttaaacaattccctaatccagaattttcatcctcactctcctcatcttccttaatcctctctgtaactctatcgatcaaaacctgaa  10979500                                                                            <---------GLK1(2)                                                                           <---------At4g35610                                                                     ------->TEIL                                                                    <---------GLK1(2)                                                                    <---------CCA1(2)      --------->ANAC58                                        <---------GLK1(1)      --------->ANAC58                                       --------->ARR14(2) ----->MYB46(3)  --------->ANAC58                            <---------GLK1(2)                <------ZmHOX2a(1) >TOE2(3)        --------->ANAC46         <---------ARR14(2) <---------ARR14(2)           <---------ANAC46 >TOE1(3)<---------GLK1(1)     --------->GLK1(2)             --------->ARR11(3)     <---------ATHB12 ->RAV1(2)       --------->ANAC58         --------->ARR14(2)<------ZmHOX2a(1) --------->At4g35610   ccatcaacaagaaatcggcacgcaaacttagagtttctgaatcaaatccccaaggagaagtaggattttcgaatctcagaagctcaatcgtggagaggaa  10979600                                                <---------HSFB2a(1)                                                --------->HSFC1(2)                                                <---------HSFC1(2)                                                --------->HSFB2a(1)                                               <-----------ARR10                                               <---------ARR14(2)                 <------ZmHOX2a(1)             --------->ARR14(2)                <----------ID1                 <---------ARR11(1)          <---------LBD16               --------->ICU4                               <---------ANAC58         <---------ANAC46           <------ZmHOX2a(1)                                <---------ANAC58       --------->CCA1(2)   ----------->HVH21   ------->TEIL                         <---------MYB46(3)      ----------->HVH21  <---------ANAC58     <---------ARR14(1)       <---------ANAC46    ----------->ARR10    <---------ANAC58     <---------CCA1(2)      <---------MYB46(3)      <-------   cgagagaagagacggggaaggacaagagcgtgaccagaggacattatcgaatcttccagcgttggagacgatggtttggagaatggtgagtgcgaggtca  10979700                                                                           ==========================                                                                     <------NtERF2                                                                     --------->LBD16                                                                    --------->DEAR3(1)                                                                   <---------LBD16   <---------GLK1(1)                                                                 <---------DEAR3(1)  <---------HSFB2a(1)                                                              <---------SPL7        --------->ARR14(2)                                                             <---------MYB46(3)     <---------ARR14(2)                                                             --------->MYB55(2)     --------->GLK1(2)                                                            --------->ALFIN1        <-----------ARR10                       --------->ANAC55(2)          --------->At4g35610    <---------TGA1a     <-----                       <---------ANAC55(2)          <---------At4g35610    <---------O2      --------      ------->TEIL   --------->MYB52(1)           <-----------RAV1(2)------>NtERF2 <---------GLK1(2) ----HVH21  ---------->DOF2           <---------ANAC46<---------REM1(1) ----------->HVH21  <---------CCA1(2)   gggttacgaaccctgagagcgagtaacgtagccttcaatggctcgaattgagccagatgaaggtggttcgccgcgagacgggagagaatctccgtctctt  10979800                                                                                           <---------ARR11(3)                                                                                           --------->AHL20(1)                                                                                           <---------                                                                                           --------->ARR11(3)         <------NtERF2                                                                    --------->CCA1(1)        <-----------TGA1                                                       >>>>>>>>>SPL1        <-----------HVH21                                                      --------->SPL7        ------>NtERF2                                                          ------------>CBF       <---------ATERF1(2)                                                     >>>>>>>>>SPL5       --------->ANAC46                                                        >>>>>>>>>SPL4       --------->DEAR3(1)                                                    --------->LBD16       --------->RAP2.6(2)                                                  <---------ANAC58       --------->RAP2.3(3)                                                  <---------ANAC58      --------->RAP2.3(1)                                --------->ATHB12------------------>SPL14    --------->DEAR3(1)                                   --------->AHL20(2) <---------ANAC46 =====bZIP_DOF               --------->At4g35610         <---------AHL20(2)--------------->AtSPL3 -----DOF2                   <---------At4g35610        <---------AHL20(2) --------------->AtSPL8 ------------->WRI1   <------ZmHOX2a(2)--------->MYB52(1)--------->ATHB51<-----------GT1  --------->RVE1(1)   tatccatcgccgtcacaaattccgatcactgagctaatacataccgattaatctgaaaattatttgctctgaaattttccgtacaatctgaaatatcttg  10979900                                                     --------->ZAT2                                                     <---------ZAT2                           -------                                                     --------->At4g35610                  --------->ANAC58                                                     <---------At4g35610       <---------TOE2(3)                                              <---------WRKY12                 <---------TOE1(3)            <---------CCA1(1)                --------->DOF5.7(2)    --------->ZAT14  ----------->HVH21            <---------RVE1(1)               --------->TOE2(3)       --------->At4g35610   --------->ANAC58           --------->ARR11(3)        --------->HSFB2a(2)            <---------At4g35610 <-----------RAV1(2) --ARR10   <---------ARR11(3)        <---------HSFB2a(2)       --------->ZAT2 ---------->DOF2 -------   gctggatttttcagatattttttgtgaagaatttttggtctggaatcgtcaacttagctgagacgagcagagcagaccattaaggctgggacagggaagc  10980000                       <-------TEIL             --------->MYB52(1) <---------AHL20(1)                   <---------AHL20(2)         --------->MYB46(3)   --------->AHL20(2)                   --------->AHL20(2)         ------------>CBF <---------AHL20(2)                  <---------AHL20(2)  <---------ANAC58     <----------DOF2                   --------                  --------->AHL20(2)  <---------ANAC46     <---------DAG2         <---------At4g35610               --------->ATHB12       <---------ANAC58    <---------ANAC58        --------->At4g35610 -->ANAC58   <---------WOX13(1) --------->ARR14(2)        <---------ANAC58     <----------DOF2  ----- -->ANAC58  <------------CBF    <---------ARR14(2)<---------ATHB12 <---------AHL20(2)       ---------   aaatgggttaacccgattgattaaattcgtttcggttctgacttgttaaccaatggttttgctttttattttattttttgtctttgctgacaaaaaaagt  10980100                                                         <------MYB46(1)                                                         <------MYB83                                                    --------->HSFB2a(2)           <---------TOE2(3)             <---------ARR11(3)               <---------TOE1(3)                  --------->YAB1             --------->ARR11(3)          --------->WOX13(1)                     --------->ICU4    ------------>CBF                  --------->ANAC58 <--------P            <------NtERF2 ->DAG2    <---------YAB1             --------->ANAC58<---------MYB52(1)    --------->LBD16 ------>GT1<---------TOE2(3)        ---------->DOF2 <---------HSFB2a(2)    <---------ANAC46 ->DOF2  --------->YAB1        <----------ID1 <---------TOE2(3)           <---------LBD16           <   gtgaaaaacaattaagattttagacaaaaaaaaaaaacaaaagcaattaaggttccagtaggtttacatgtataatggcggaataatgttttcttagact  10980200                                       --------->ATHB12                                       --------->YAB1                       <---------AHL20(2)                      <---------AHL20(1)                      <---------AHL20(2)          <---------ANAC46                      --------->AHL20(1)    <---------YAB1        <---------ANAC58               <---------ICU4                     ------>ZmHOX2a(1)     -----        <---------ANAC46              --------->ICU4                     --------->TOE2(2)<---------ZAT6        <---------ANAC58             <---------WOX13(1)     ---------->DOF2         <---------AHL20(2) <<<<<<<<<<<<<<<<LFY  --------->AHL20(2)  <<<<<<<<<<<<<<<<<LFY        ------->TEIL --------->AHL20(2)   atctacaatggcttattgaaaaaatttattcaatagttgaatgattacaatggggtattgaataaagaaatgaatcctatgtggattaaatagtgttgaa  10980300  Previous    Next  AGI:  At2g25730.1    Description:  binding / heme binding. similar to hypothetical protein OsJ_002364 [Oryza sativa (japonica cultivar-group)] (GB:EAZ12539.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ66138.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44137.1); contains InterPro domain Tetratricopeptide TPR2 (InterPro:IPR013105) Range:  from: 10963380    to: 10979807    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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