Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <-------TEIL                                                   <---------ANAC46                                                   <---------ANAC58                                                   <---------ANAC58                                                  --------------->AtSPL3            ------>NtERF2                    <---------ICU4                                   -------           --------->RAP2.6(2)            --------->YAB1                                      -------           --------->DEAR3(1)            <---------ATHB12                               ----------->RAV1(1)      ---------->DOF2                <---------AHL20(2)                      <----------DOF2--------- ->YAB1  <---------At4g35610         --------->AHL20(2)                 <-----------GT1<----------ID1   aatatagattaagccgactaattagcatcagataagtttttaaatcataagtaccgtacattttggtattctagttactctttttttatacaacaaaagc  10948900                                                        --------->TOE2(3)                                         <----------TaMYB80              --------->ZAT2                                         --------->KAN4(1)               <---------ZAT2                                         <---------KAN4(1)     <---------AHL20(2)     --------------------->WRI1         <---------KAN4(2)------>ZmHOX2a(1)    --------->TOE2(3)                   <---------ARR14(2)     --------->AHL20(2)   --------->At4g35610   <---------YAB1            <---------ARR11(3)         --------->TOE1(3)<---------At4g35610  --------->ARR11(3)         --------->ARR11(3)   <---------ARR11(3)     --------->At4g35610  <---------ARR11(3)         <---------GLK1(2)    <---------AHL20(1)  ------>ZmHOX2a(1) -->ANAC58       ---------->DOF2        ---------->TaMYB80    <---------AHL20(2)    <---------At4g35610 -->ANAC58      --------->TOE1(2)       --------->ARR14(2)    --------->AHL20(2)    <---------LBD16 ->DOF2  ---------->DOF2    <---------RVE1(1)     --------->AHL20(1) --------->TOE2(3)--------->LBD16   aaattatcttagaaagaaccaaagaatgagagattttcaaagaatatgccaaaatattccttaattaaattcctcagcttcaaatcagcggagaaatatt  10949000                                               --------->YAB1                                               <---------AHL20(2)                                               --------->ATHB51                                               <--------HAHB4                                               -------->ATHB1                                               -------->HAHB4                                               <---------ICU4                                              --------->ICU4                                     --------->AHL20(2)                                     <---------AHL20(2)                                    --------->YAB1 <---------AHL20(2)                                <---------YAB1<---------ATHB51                                  <----                                ------>ZmHOX2a(1)  --------->AHL20(2)                    <---------YAB1                 --------->TOE2(3) <---------YAB1 --------->AHL20(2)                  --------->ICU4        ---------->DOF2         --------->ICU4<---------YAB1      <----------DOF2--------->ANAC58   ------->GAMYB----------->GT1--------->TOE2(3) <---------YAB1 ------->TEIL     --------->AtLEC2  --------->MYB46(3)     <-----------GT1 ----------->GT1 --------->AHL20(2)      --------->ANAC58   tgtaacagacaaaagaaaatgttaatttttcatccttattaaaatgtaattattaaaaaaaaaatgaactttgaagaaacaacatgcaaagattataact  10949100                 <---------AHL20(1)                 --------->AHL20(1)                 --------->AHL20(2)                 <---------AHL20(2)                                   --------->YAB1                --------->AHL20(2)                       --------->DAG2      --------->TOE2(3)                                  <---------------AtSPL8               -------     <---------ICU4                 ------>MYB46(1)      --------------->AtSPL8     ----------->HVH21    --------->ICU4        ---------->DOF2               ---------->DOF2          <-----------GT1 ------DOF2     <---------ATHB12    ------>MYB83  <-------TEIL     --------->WOX13(1)        --------   ttggtaaacattagaccaataaattttctaaagaaaccaaatttgacccatatacataaaaagtactataaatcaaaaccatttttctgactgagaatgt  10949200                                                                               ------>ZmHOX2a(2)                                                                             <---------AGP1                                                                             <---------ARR14(2)                                                                             --------->ARR14(2)      <----------DOF2                                                        ------->TEIL   <-----------GT1                                                           <---------ARR11(3)  --------->AHL20(2)                                                         --------->ARR11(3) ---->GT1                    <---------DAG2                                 <---------CCA1(2) ->GLK1(2) <---------TOE1(2) <----------DOF2   <---------ATHB12         <---------AtLEC2   gaaattaactttctaggttttgaaagagtagctttttttgtgaatagaaatcaatttctgagatgtgttttcttacatggatcttgtaatctcttctctc  10949300           <---------LBD16        ------>MYB83        ------>MYB46(1)                                                                          ====      --------->MYB46(3)  --------->ARR14(2)                  <------------CBF                   <---     --------->DEAR3(2)   <---------ARR14(2)             <------ZmHOX2a(1)                       ====     ----------------->AGL1   --------->LBD16           ----------->GT1               ----------->HVH21     <-----------------AGL1 <---------LBD16        ---------->DOF2      ----------->GT1          ====    ------->TEIL ---------->DOF2 *TSS            <---------YAB1  <---------LBD16---------->DOF2  ====   aatctgtaccgactggggaaaaagaacagaaccggaagcagtagaagacttatgaaagaggagaaattggggaaatgaaaaataaagactgacccaagag  10949400                     <---------MYB46(3)                    <---------ANAC58                    <---------DEAR3(1)             ------>ZmHOX2a(2)            <------ZmHOX2a(2)           --------->ARR14(2)           <---------ARR11(1)           <---------ARR11(3)           <-----------ARR10           <---------ARR14(2)           <---------AGP1           --------->AGP1          <---------CCA1(2)          <---------ARR14(1)         --------->LBD16       <---------LBD16<------NtERF2             <-----------HVH21       ------>ZmHOX2a(2)                       <---------ANAC58      <------ZmHOX2a(2)               ------>ZmHOX2a(2)     ------->TEIL   <---------ANAC58 --------->CCA1(2)     <---------ARR14(2)              <------ZmHOX2a(2)     --------->ARR14(2)<-----------HVH21 ---------->DOF2 =============HOX2a_HOX2a           --------->AGP1  <---------ANAC46 ---ZmHOX2a(1)     <---------LBD16  <---------ARR14(2) ===================HOX2a_HOX2a     --------->ARR14(2) ---------->DOF2                       <------- ==================HOX2a_HOX2a    ----------->ARR10 ----------->GT1            <----------DOF2     -- ============HOX2a_HOX2a--------->WRKY18(1)    <---------ANAC58    <---------YAB1            --------   gataatggatccggatctatgggcgggtcaagaagatagatccgaaagcgcgtgaggtaaagaggtgttatcagagagaggcttttttgagagaataatt  10949500                                                                             --------->AHL20(1)                                                                           <---------AHL20(2)                                                                           <---------AHL20(1)                                                                          --------->YAB1      <---------REM1(2)                                                  <---------YAB1      --------->ZAT14                <----------DOF2                   --------->YAB1 XXXXXXXXXXXXXXXXXXXXX>MIR831    ---------->ID1                  <---------MYB46(3) --AHL20(2)               ------>MYB83              <---------ALFIN1  <---------YAB1 -------->ID1             ------>MYB46(1) --------->ZAT18     <---------ANAC46             ---------- ->ATHB51               <---------MYB59   <---------ZAT14  <---------MYB52(1)<---------AHL20(1)     -   tggctctcttcacactcttctctataccaaattttggctctttttgcactgttcccactctgttttgtggttcttataatattttttgtttttgtcttat  10949600             --------->ANAC46             --------->ANAC58    <---------MYB46(3)                --------->AHL20(2)    <---------DEAR3(2)     ---------->DOF2   ----------->GT1                                       <-  <------NtERF2      <----------DOF2  <---------AHL20(2)                      <----------DOF2      -- >ID1        --------->ANAC58       ------>MYB83 <---------AHL20(2)   <----------DOF2             <-- -------->ALFIN1------->TEIL        ------>MYB46(1)              <-----------GT1       <----------DOF2   aggtgtcggtttcatacgcacttctttttaaaagaaccaaataaatattgtataattttccccaatgttacactttgggtctttagccactttggaatca  10949700                                                                                       ---------->DOF2    <---------YAB1                                                                <---------ICU4    --------->ICU4            --------->At4g35610                                 <--------HAHB4  --------->YAB1              <---------At4g35610         <---------AHL20(2)      --------->ATHB12  <---------ICU4         --------->ANAC46                 --------->AHL20(2)     <---------ATHB12 --------ICU4            --------->ANAC58                <---------WOX13(1)<----------DOF2 <--------- ------->YAB1            --------->ANAC58             <---------YAB1  <----------DOF2 <---------AHL20(2) -------ATHB12    <------ZmHOX2a(1)         ----------->GT1<---------AHL20(2)  <-----------GT1   ataatcatgtttaaaatagaggataacaaggaagcttaatggtatttagtgaatttttgattaatttgttttcttttcttttaatcatttaaagctacaa  10949800  Previous    Next  AGI:  At2g25690.1    Description:  senescence-associated protein-related. similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT5G11460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44134.1); contains InterPro domain Protein of unknown function DUF581 (InterPro:IPR007650) Range:  from: 10947225    to: 10949333    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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