Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------------->AGL15                                           <---------------AGL15          <---------AHL20(2)   <-----                             <---------ALFIN1 --------->ZAT6 --------->MYB52(1) ----------->GT1<-----     --------->ZAT2     <---------ARR14(2) --------->HSFB2a(2) --------->HSFB2a(2)            <------     <---------ZAT2     --------->ARR14(2) <---------HSFB2a(2) <---------HSFB2a(2)            -------   tggacacagcttgatcatcttatgcaaatccacactcacgattttctaaaactagtttgaaacttacagaaaacatttttttttgtaaatttcttagata  10915000                                                            ----------->GT1                                                       <---------YAB1     <-----------GT1                              --------->ATHB12 ----RVE1(1)                <---------ICU4       <------ZmHOX2a(2) ----CCA1(1)                ---------->DOF2      <---------YAB1                                  <--- ---ARR11(3)             --------->YAB1         <---------ARR11(3)                         ---------- -->ARR11(3)            <---------ATHB12        --------->ARR11(3)<---------YAB1    ---------->DOF2   tttcaaataactctctcgagacataaatcataaagacgataactagttaagatcattgtgaatagtttataatggatttaacaaaaaaaagaatagttta  10915100                                                                                     <---------ICU4                                                                                    --------->AHL20(2)                                                                                   <---------AHL20(1)                                                                                   --------->AHL20(1)                                                                                   <---------ARR11(3)                                                                              ----------->GT1                                                                             ----------->GT1                                                                       --------->ANAC58                            <---------YAB1                             --------->ANAC58                           <---------AHL20(2)                          --------->ANAC46 <-----------GT1                           --------->AHL20(1)                         --------------->AGL15                          --------->AHL20(2)                          ===============================                          --------->ATHB51                  --------->DAG2  --------->DAG2 ------YAB1               <---------AHL20(2) <------------CBF   ----------->GT1    --------->ARR11(3) ->GT1        ----------->GT1          <-----------GT1     ---------->DOF2 ---------->DOF2   taatggagtcttgagagagttatttgaattattttgggaatttacaaaattgttggataaaaaaagtagttacaagaaaaaggaaaatatttacaagtgt  10915200                                                                         ----------->GT1                                                                         --------->ANAC58                                                                 <---------ICU4                   ---------->DOF2                               -------->HAHB4                <---------HSFB2a(2)                             --------->ICU4                     --                --------->HSFB2a(2)                             <---------ATHB51                <----             ------>ZmHOX2a(1)                                --------->YAB1            --------->ARR11(3)             ===============================HOX2a_HOX2a       <---------ICU4  --------->ICU4    -----         <-----------GT1                  ------------>CBF   ========================================      --------->AHL20(2)             <------ZmHOX2a(2)       <---------------AGL15<---------AHL20(2)      <---------AHL20(2)            <---------ARR11(3)       --------------->AGL15--------->AHL20(2)      <---------ICU4                --------->ARR11(3)    <-----------GT1--------->ANAC58     <------ ============================================================================MADS_MADS  <---------ARR11(3)   gtttctaattttttcctactagaaagacaactagataagatcatttcaatagtcttctattcactaattatggacaagtaaaaattaaaagatttgttac  10915300                                       ------------>CBF                                            --                                      --------->ANAC46                                            <--                               <-------TEIL                                                       ---                        <---------AHL20(2)                                                   <-------                    <---------------AGL15                                                <---------AHL20(1)     <---------CCA1(2)<-----------TBP --------->ANAC58                                   --------->AHL20(2) ------->AtMYB61    --------------->AGL15                                                --------->AHL20(1) -------GT1        <-----------------AGL3  ----------->GT1             --------->ZAT6    <---------AHL20(2) ---->REM1(1)    <-----------GT1      --------->ANAC58               <-----------GT1    --------->AHL20(2) ===================================MADS_MADS                     ----------->TBP   <---------AHL20(2) -----GT1 <-----------GT1    <---------GLK1(2)                <---------ANAC46  --------->ICU4 <-----   accatctctatcttacatttctctatttatagattcacatacccaatgtaaaaacaaatctcttgcctatataactctagacataattcattatattaca  10915400                                                       <---------SPL7                                                   <-----------GT1              --------->YAB1                  <---------AHL20(2)              <---------ICU4                  <---------ICU4 ----->GAMYB <---------ATHB12                --------->ICU4 -------MYB52(2)   ---------->DOF2        --------->AHL20(2)                        <---------ATHB12 ------>MYB46(3) --------->YAB1         --------->ANAC58                     <---------ANAC58 ----GT1 <-------TEIL                   ----------->GT1--------->LBD16  <---------ICU4    <---------MYB46(3) -----ID1------------>CBF               --------->ANAC58      <---------ZAT6 <---------ANAC58   acaaacaaagattcaataatcaaaagaaaaatttagaatgacaagtaaatatttctccgtactagtgttcatcatcttggcttccaatgaagttgttgcc  10915500                                                                         <---------ANAC58          <-                                                            <---------ZAT2  --------->SPL7      <----                                              <---------ARR11(3)    --------->AtMYB61           <----                                              --------->ARR11(3)   --------->MYB46(3)        <-------                                        --------->HSFB2a(2) --------->ZAT2<---------SPL7     --------                        <---------TOE2(3)--------->LBD16    <---------At4g35610           <---------At4g35610                 <---------------AGL15  <---------HSFB2a(2) --------->At4g35610           --------->ZAT2                 --------------->AGL15 <---------LBD16     --------->ARR14(2)             <---------ZAT2                --------->TOE2(3)  --------->GLK1(1)       <---------ARR14(2)           <------ZmHOX2a(1)             <---------ALFIN1      <---------GLK1(1)   <---------LBD16   <---------ANAC58 --------->At4g35610   aagagacactcttcaacacctaaattaagaaaaactgatttcccagaagatttcattttcggagctgcaacctctgcgtaccaagttgaaggagctgctc  10915600                                                                                      <---------At4g35610                                                                              ------>ZmHOX2a(2)                              --------->ANAC55(2)                            <------ZmHOX2a(2)                              <---------ANAC55(2)          ---------->DOF2  ------->TEIL -----ZmHOX2a(1)           <---------ARR14(2)             <XXXXXXXXXXXXXXXXXXXXMIR773 --------->At4g35610 -------RAV1(2)            --------->ARR14(2)            --------->CCA1(2)  <---------ARR14(2) -----LBD16         <---------ARR14(2)                ----------->GT1       --------->ARR14(2) --At4g35610        --------->ARR14(2)              ---------->DOF2         <---------AGP1 ->At4g35610<------ZmHOX2a(1)<-------TEIL        --------->LBD16       --------->MYB52(1)   aggaagatggtagaggacctagtatatgggatacgttttctgaaaaatacccagaaaagataaaagatggtagcaacggatctattgcagatgactctta  10915700                                                                                     --------->O2                                                                                     --------->TGA1a                                                                                     <---------O2                                                                                     ================                                                                                     <---------ANAC46                                                                                     <---------TGA1a                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                           <---------CCA1(2)                                                                         <---------ANAC58                                                                         <---------ANAC46        ----                                                                         <---------ANAC58     -------                       --------->ATHB12                                  --------->ANAC55(2)  -------              <---------ARR14(2)                                     <-----------HVH21        -------             <------ZmHOX2a(1)           <-------TEIL            <---------ANAC46    ================  <----------DOF2--------->ALFIN1     <---------ANAC58   <-----------GT1 <---------ANAC55(2)--------- <---------ICU4--------->ALFIN1       <---------ANAC58<---------GLK1(2) <------NtERF2================   ccatctttacaaggaggatgtgggtttattgcatcaaattgggttcaatgcctatagattctccatctcgtggtcgcgtattttgcctcgtgggaatctt  10915800               --------->ZAT2               <---------ZAT2              ------>MYB83    <------ZmHOX2a(1) =======bZIP_DOF ------>DOF2  ------>MYB46(1) -->YAB1  -------->P -->TOE1(3) ------->GAMYB -->TOE2(3)--------->MYB46(3)                                                     --------->MYB46(3)- ===================MYC_MYB                         <----------DOF2               <---------ATHB12  - >GLK1(2)--------->WOX13(1)        --------->MYB46(3)       ---------->DOF2  --------->ANAC58       - ==================MYC_MYB    --------->YAB1 --------->WOX13(1)              --------->ANAC58     <--   aaaggaggaatcaaccaagctggtattgactattacaacaacttgatcaatgagcttttgtctaaaggaattaagcctttcgcaaccattttccattggg  10915900  Previous    Next  AGI:  At2g25630.1    Description:  glycosyl hydrolase family 1 protein. similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT5G44640.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT5G42260.1); similar to glycosyl hydrolase family 1 protein [Arabidopsis thaliana] (TAIR:AT2G44450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67226.1); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781); contains InterPro domain Glycoside hydrolase, family 1; (InterPro:IPR001360) Range:  from: 10915438    to: 10916958    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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