Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <----------DOF2                                                                              <---------DAG2                                                                            ------->TEIL                                                                         <------ZmHOX2a(2)                                                          ----------->HVH21 -------->P                                        --------->At4g35610              ============================         --------->MYB46(3)        >>>>>>>ZML2            <----------ID1<---------ARR11(3)       ----   aaaaacaatgaacaaacacttgttcattcacatagttctagcatctaaatcagagccaatgtgacaaatctctagatcaacctttctttcttcaatctcc  10909200                         <---------MYB46(3)        <---------ANAC58                   --------->ANAC58                <---------ANAC46                   --------->ANAC55(2)             ----------->GT1                   --------->ANAC58                <---------ANAC58                        --------->GLK1(2)                   --------->ANAC46          --------->AHL20(2)                           <---------GLK1(2)                <---------SPL7               <---------AHL20(2)                         ----------->ARR10 ===HOX2a_HOX2a<---------ANAC58       ----------->GT1                            ----------->RAV1(2) -->ZmHOX2a(1) <---------ANAC58--------->ANAC46   <-------TEIL                 <---------ARR14(2)   taaactacaatctaatggcatacgcattggttcacacaaattgataaaaaaattcgtgaaattgaaattgaatcgaaggcaaaacctgatgagattcttg  10909300                         <---------ALFIN1                         --------->DEAR3(1)                        --------->ATERF1(1)                        <---------ABI4(2)                        <------NtERF2                       <---------ORA47(2)                       <---------ERF1                       <---------RRTF1(1)                       <<<<<<<<<AtERF-3                       <<<<<<<<<AtERF-4                       ------>NtERF2                       <---------ATERF1(1)                       <---------RAP2.3(1)                      <---------DEAR3(1)                      <---------RAP2.6(2)                      --------->ATERF1(2)                      <---------RAP2.3(2)                      <---------RAP2.3(3)                      --------->bZIP60(1)                      <---------RRTF1(3)                      <---------ATERF1(2)    <---------MYB52(1)                     --------->RAP2.6(3)    --------->LBD16              <----------DOF2              --------->HSFB2a(2)                 ----------->GT1     --            --------->At4g35610<------ZmHOX2a(2)                     ---------->DOF2              ---          ============================HOX2a_HOX2a                 --------->TOE1(3)              ----          <------ZmHOX2a(1) --------->DEAR3(1)   ----------->GT1  <---------------AGL15          ----       <---------HSFB2a(2) <------NtERF2   <---------HSFB2a(2)    --------------->AGL15      <-------       --------->HSFB2a(2)------>NtERF2   <---------LBD16         --------->TOE2(3)          <-------   gaagtgattcgaggagcttcaatggcggcaccgatcaaactacttccggtaatgtaaattcccctaaaccataaagagagagagcaaaatagttttcgta  10909400     <---------ICU4     --------->ATHB12    <---------YAB1    --------->ICU4                                   <---------At4g35610  --------->YAB1                                     <------NtERF2                                <-- --------->ICU4                                      --------->At4g35610                         ---- ------->YAB1                                        <---------ZAT2                             <---- ------>ICU4                                        <---------ATERF1(1)                        <----- ----->ANAC58                                   --------->ANAC46        --------->DEAR3(1)   <------- ----->ANAC58                         <------ZmHOX2a(1)                <------NtERF2   --------->GLK1(2) --ANAC58                     >>>>>>>>>TBF1 <-----------GT1           ------>NtERF2    --------->ARR14(2) --ANAC58       <---------ATHB12  ---------->DOF2--------->ANAC46    --------->DEAR3(1)<---------ARR14(2)   agcatgatgatttcgcaaatcaatggggagaagaagaaaaggatttataccaggcagcaccaagaacagagacgccgatggagatggcgattccgatggc  10909500                                 <---------ATERF1(1)                                --------->ANAC58                                <---------ALFIN1                                --------->ANAC58                                --------->DEAR3(1)                                --------->ATERF1(1)                                --------->ANAC46                 <-----------ARR10                 --------->GLK1(2)                --------->ARR14(2)        --------->SPL7         ------>NtERF2        <---------LBD16       <---------ATERF1(1)      <---------SPL7          --------->DEAR3(1)      --------->ZAT18        --------->ATERF1(1)      <---------ZAT14      --------->ARR14(2)      --------->ZAT14  ----------->RAV1(2) ---------->DOF2<---------GLK1(2)------>NtERF2 ----NtERF2     <---------ARR14(2)        ------->TEIL         --------->LBD16 ----->LBD16   <---------HSFB2a(1) --------->RAP2.3(3)         ----------->HVH21 -----ANAC46   --------->HSFB2a(1)<------NtERF2             --------->MYB52(1)                   ---- ----LBD16<---------LBD16  <---------ARR14(2)   <---------TOE1(2)                         <---------YAB1 --DEAR3(1)   ----------->ARR10<---------ATERF1(1)         <---------ALFIN1        <----------DOF2   ggagaaagtgtacggggagattctcaccagagccgcgccccatgaactcgcatgaatagccacaccggacattttctctctatctctttgatatgaatga  10909600                                         --------->MYB52(1)                                     --------->ATHB12                                           <----                                    --------->ICU4             <------------CBF                 <----                                <------ZmHOX2a(1)         ------>ZmHOX2a(2)                  ------->TEIL                                ================================HOX2a_HOX2a               <---------YAB1                                =================================HOX2a_HOX2a            --------->At4g35610                             ===================================HOX2a_HOX2a       --------->ANAC58                             ====================================HOX2a_HOX2a      --------->ANAC58           <----------DOF2   <------ZmHOX2a(1)           <------ZmHOX2a(2)        --------->ANAC55(2)       ---------->ID1  <---------LBD16 <---------WOX13(1)--------->At4g35610      <---------ANAC55(2) --->TEIL*TSS        <----------DOF2<---------YAB1   <---------ZAT18           <---------ATHB12 <----   atttgatttgtctctttctctgtctttcggaggaggagatgattaacagagcctgtgcgatctgaaattgagcaactccaaatcacgcgctgatgaatgc  10909700                                                                                           --------->LBD16                                                                                          --------->ANAC46                                                                                          <---------LBD16                                                                                         <---------LBD16                                                  <----------DOF2                      --------->ARR11(3)          --------->YAB1                       <---------ALFIN1                        --------->ARR14(2)     ------------>CBF               --------->CCA1(2)   ============================HOX2a_HOX2a -----ANAC46       <---------ARR14(2)         --------->ZAT18                          <---------ARR14(2) -----ANAC58       --------->ARR14(2)         <---------ZAT18                         <---------GLK1(1) -----ANAC58<---------YAB1<------NtERF2  ---------->DOF2------>ZmHOX2a(2)    ------>ZmHOX2a(1)   ----   gcgtgaattcaattaccatcgtataggcctcgtaagcgatacgaatagcccactttgatcggactattgggccttgttcctcatttgaatatccgggaca  10909800                                   <---------TOE2(3)                              --------->LBD16                                 ----------->HVH21                               --------->ANAC58                                 ------->GAMYB                                   --------->ANAC46                                 ----------->TGA1                    <----------DOF2      <---------MYB52(1)                                <------------AtMYB77                 <---------DAG2  <xxxxxxxxxxxxxxx                                <---------MYB52(2)           <---------ZAT14     --------->ANAC58                           --------->YAB1                --------->ZAT6         <---------LBD16------                      --------->AHL20(2)   <---------ZAT18   --------->ZAT14  --------->ARR14(2) ----->GLK1(2)    --------->ANAC46--------->MYB52(1)  --------->bZIP60(2)     <---------ARR14(2) <---   atctcgttgttcagagtttcacgataaaatagtaactgacgatggctcactcagcctcatcactagactgacttttccagcatccgcaaaccgataagtg  10909900                                              --------->TGA2(2)                                             <-----------TGA1                                            --------->ANAC55(2)                                            <---------ANAC55(2)                                            --------->ANAC55(1)               <---------ARR14(2)           --------->ANAC58              ------>NtERF2                 --------->ANAC46             --------->RAP2.6(2)            --------->ANAC58                     <---------TOE2(2)             --------->DEAR3(1)   <---------ARR11(1)                           --------->TOE1(2)        ---------->DOF2           <---------ARR14(2)                       <---------WRKY38(1)       <---------WRKY38(1)        <---------ARR11(3)                       <---------WRKY12       <---------WRKY12           <-----------ARR10                    --------->MYB59       <---------WRKY45   <-----------GT1  <-------TEIL             <---------ARR14(2)      --------->WRKY18(1)--------->ZAT14   <-----------STF1         --------->ARR14(2)   --------->ALFIN1      <---------ZAT14 --------->TOE2(2)        <---------ARR11(3) xsmallRNA(fl3)--------->ARR14(2) --------->ARR14(2)            <-----------------AG         <------- --->ALFIN1 --------->DEAR3(2)   <---------CCA1(2)             ----------->RAV1(1) <------ZmHOX2a(1) ------------------WRI1  --------->ZAT18 --------->TOE1(2)    --------->ANAC46--------->ANAC46  <----   gcgatgtggtcaaagccgaccctcgagtttactgcatatctaacatacgtcattctgcaagaacacaacatattcggtaaacgcaggaattggaataact  10910000                                                                                 --------->ATHB12                                                                                 --------->ATHB51                                                                                 <---------ICU4                                                                                 -------->ATHB1                                                                             --------->AHL20(1)                                                                        <---------ATHB12                                                                       ------>MYB83                                                                       ------>MYB46(1)                                     <---------YAB1                  <---------MYB111(1)                                   <---------ICU4                    --------->MYB46(3)      <------NtERF2                                   --------->YAB1                    <---------MYB46(2)     ------>NtERF2                                  <---------YAB1                     <---------MYB59        <--------                                  --------->ICU4                     <---------MYB111(2)   --------->DEAR3(1)                                -------->ATHB1                     -------->P--------->AHL20(2)                                --------->ATHB51                   ------>MYB46(1)         --------->RAP2.6(2)                                <---------ICU4                     ------>MYB83 --------->ICU4                                <--------HAHB4              <---------ARR11(3)  <---------ATHB51                                --------->YAB1           --------->AHL20(2)  <---------AHL20(2)                               --------->ICU4          --------->AHL20(2)    <---------AHL20(1)    <-----------GT1            <---------YAB1   <----------ID1    ------>ZmHOX2a(1)        <---------ATERF1(2) ----GT1                 <---------At4g35610 --------->DAG2 --------->ARR11(3)  <---------AHL20(2) ------DOF2              --------->At4g35610---------->DOF2 --------->AHL20(1)  --------->AHL20(2)   ttctagttacaaaacaaatgagactgaagcagaattattattatgcaaaagtgacaaaaaaatatatcctaccaaacaataaattattgtatgccgcctc  10910100  Previous    Next  AGI:  At2g25610.1    Description:  H+-transporting two-sector ATPase, C subunit family protein. similar to vacuolar ATP synthase, putative / V-ATPase, putative [Arabidopsis thaliana] (TAIR:AT4G32530.1); similar to unknown [Populus trichocarpa] (GB:ABK94274.1); contains InterPro domain ATPase, V0 complex, proteolipid subunit C,; (InterPro:IPR000245); contains InterPro domain ATPase, F0/V0 complex, subunit C; (InterPro:IPR002379) Range:  from: 10908369    to: 10909609    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g25620.1    Description:  protein phosphatase 2C, putative / PP2C, putative. similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT2G33700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44159.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045); contains InterPro domain Protein phosphatase 2C, manganese/magnesium aspartate binding site; (InterPro:IPR000222) Range:  from: 10910021    to: 10912323    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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