Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      -------->HAHB4                                                                    --------->YAB1                                                                    <---------ICU4                                                                   --------->ICU4  --------->MYB52(1)                                               <---------ATHB12 ---------MYB52(2)                                                 <---------YAB1                   - ---------MYB46(2)            <---------TOE1(3)                <------ZmHOX2a(1)                    - ---------MYB111(1)           <---------TOE2(3)               --------->ANAC46                      - ---->TEIL  ----------------->AG <----------DOF2             --------->LBD16                      --- ----ANAC55(2)               <-----------GT1                <---------HSFB2a(2)                  ---- ----->GT1  ----------------->AGL1                          --------->HSFB2a(2)           --------->LBD16 --->ANAC55(1)          --------->ICU4               <---------WOX13(1)                  <---------ANAC46 --->ANAC55(2)      <-----------HVH21     --------->MYB52(1)<---------LBD16             <---------LBD16   taactaacacagttaccaaaactgtcacaattaagctttccaagtaccagagtagattgattccaggaaatgattatctaaataccaatttgcgcataaa  10901200                                                                                ------->GAMYB                                                                             ----------->RAV1(1)                                                                            --------->MYB46(3)                                                                     <------------ATHB5                                                                     <--------ATHB1                                                                     --------->ATHB51                                                                     --------->ATHB12                                                                     <---------ICU4                                                                     -------->ATHB1                                                                    --------->ICU4                                                                    <<<<<<<<<<AGL20                                                                    <---------YAB1<---------GLK1(2)         ------>ZmHOX2a(1)                                          <<<<<<<<<<AGL22      ------>ZmHOX2a(1)                                             <<<<<<<<<<AGL24     <---------ALFIN1                                               <---------ATHB12  --------->AtMYB61                                               --------->WOX13(1)  ------->GAMYB                                                  <---------------AGL15 --------->MYB46(3)                                              ------------>ATHB5 ------->P                                                      ----------------->AGL1 ----->MYB46(1)            ------>MYB46(1)                      ----------------->AGL3 ----->MYB83<----------DOF2------>MYB83                       <-----------GT1--------->MYB52(1) ------>AtMYB61       <-----------GT1              ------>ZmHOX2a(1)<---------ATHB51 ----->MYB46(3) --------->HSFB2a(2)             ------>ZmHOX2a(1)--------------->AGL15   ccaacctcctccttctttctcgatttaccaagcgtttttggattgtagtcctcctatttgaattttgccaattattgaacaacagaaacttgtatgatgt  10901300                                                                                           ----------                                                                                          --------->ANAC58                                                                                          -----------                             <----------ID1                                               --------->ANAC58                           <---------------AtSPL8                                --------->LBD16                          <---------LBD16                                  <---------At4g35610                      --------->ATHB12                                     --------->At4g35610        ----------->GT1   <---------ANAC46       <-----------GT1    <---------YAB1      --------->MYB52(1)  --------->ANAC55(2)<---------YAB1   ---------->DOF2          ----------->GT1  --------->HSFB2a(2)   ttttaagtattggtaatattagtatgtttgggggacaaacaaaagcctaattaaccaaaaaactatagttaatattcagttcccagagcaaaacggaaaa  10901400                                                             <---------YAB1                   -------  --------->ANAC58                                    ----------->GT1                 ---------------  --------->ANAC58                                  ------->TEIL          <-----------RAV1(1)-------- ->GT1             <---------YAB1       ---------->DOF2      <-----------GT1      ----------->TBP   - >GT1     ----------->GT1         --------->ZAT18<---------ATHB12     <---------YAB1---------->DOF2--   aaacatgccaatttgttaattttgaaagtttctatgagcactaaaagaccaatgaaccgaaatatacttgctatttttgtggctacaaaagcagaaaaag  10901500                        --------->ANAC58                        --------->ANAC58                       --------->ZAT18                      --------->TCP23                      --------->TCP15(2)                      --------->TCP16(2)                     <---------TCP15(1)                     <---------TCP11(2)                     ------>NtERF2                     <---------TCP16(1)                     <---------PCF5                     <---------TCP20                     --------->PCF2                    <-----------TCP11(1)           --------->MYB52(1)            <---------ANAC55(1)                 --------->ANAC55(2)            <---------ANAC58                    <---------ANAC55(2)            <-----------------AGL1              --------->ANAC55(1)            <---------ANAC58                    --------->YAB1                             --------->ARR14(2)            ----------------->AGL1              --------->ANAC58                      --------->LBD16            --------->ANAC55(2)                 --------->ANAC58                     --------->TOE1(2)            <---------ANAC55(2)             <---------MYB52(2)          ----------->GT1    <---------ARR14(2) -->DAG2    <---------ANAC46                --------->MYB46(3) <------ZmHOX2a(1)     --------->TOE2(2) --------->ANAC81   <---------PCF2       <----------ID1       ----------->GT1     <---------ARR14(2) -->DOF2  <-----------GT1  ----------->RAV1(1)--------->MYB52(1) --------->CCA1(2)--------->ARR14(2) ---------->GT1<-----------HVH21     ---------->DOF2       ---------->DOF2 <---------GLK1(1) --------->GT1<-----------RAV1(1)---------->DOF2--------->ANAC46*TSS ---------->DOF2--------->DEAR3(2)   gagggaaaatagttacctgttggggcccacaacaaaaaagaaagaaacaaacgtaacagaaaaaaggatataaaaggaaattcgaaaccggcgaattcgg  10901600                              --------->LBD16                             --------->ANAC46                             --------->ANAC58                         ------>ZmHOX2a(2)                             --------->ANAC58                        --------->At4g35610                            <---------LBD16                          <------ZmHOX2a(2)                   <---------ANAC55(2)                               <---------At4g35610                   --------->ANAC55(2)                              --------->ARR11(3)                   <---------ANAC55(1)                              <---------ARR14(2)                   <---------ANAC58                                 --------->ARR14(2)         <-----                   <---------ANAC46                 ---------->DOF2 <---------ARR11(3)>>>>>>>>>TBF1                   <---------ANAC58      <---------YAB1 ---------->DOF2         <xxxxxxxxxxxxxxxxsmallRNA(s)   agaaaaaaaaaaaaaaaccttgcgtgtttatccgcaagggattttgattttggaaaaagaaagagagagggatctgaagcatggagaagaagaaggtatg  10901700                                         <------ZmHOX2a(1)                                <------NtERF2                               <---------ATERF1(1)                              <---------DEAR3(1)                              --------->ALFIN1                              <---------ANAC46                   ------>NtERF2--------->ATERF1(1)                  <---------DEAR3(1)  --------->At4g35610                    <---------ANAC58                 --------->ATERF1(1)  <------NtERF2            --------->LBD16                      -          ---------->DOF2    --------->ATERF1(1)              <---------ANAC46----------->HVH21   ---      --------->ALFIN1       <------NtERF2--------->ALFIN1   <---------LBD16--------->At4g35610 <----      <---------ANAC46     <---------DEAR3(1)          ---------->DOF2  <-----------RAV1(1)     -----    <---------ANAC58       --------->ALFIN1    <------ZmHOX2a(1)   <------ZmHOX2a(1)            <----    <---------ANAC46      <------ZmHOX2a(1) <------ZmHOX2a(1)<-------TEIL   <---------At4g35610 -----    <---------ANAC58<------NtERF2     <---------At4g35610  --------->ARR11(1)<---------ANAC58   ===== ----AtMYB61    <---------ATERF1(1)<------NtERF2      --------->TOE1(2) <---------REM1(1)    --------   gttttggggtgtgaaagacgacggcgaaggaggcggaggcagaggaggaggaagaaccaaagatgcggaggatgatgttgctgaccatttatctcgcgac  10901800                                                                         --------->TGA2(2)                                                                       >>>>>>>>>>HY5                                                                       --------->TGA2(1)                                                                       <---------O2                                                                       --------->TGA1a                                                                       --------->ANAC55(2)                                                                       <---------bZIP60(1)                                                                       ===========================bZIP_DOF                                                                       <---------ANAC55(2)                                                                       <---------ANAC46                                                                       --------->O2                                                                       --------->ANAC58                                                                       --------->ANAC58                                                                       <---------TGA1a                                                                       <---------bZIP60(2)                                                                       --------->bZIP60(1)                                                                       <---------TGA2(1)                                                                       ===========================bZIP_DOF                                                                      <-----------STF1                                                                     <---------TGA2(2)                                                                    ----------->HVH21                                                                    ----------->TGA1                                                                   <-----------HVH21                                                                  ================================bZIP_DOF                                                                  <---------O2                                                                  --------->O2 -------->SPL7                                                    ================================bZIP_DOF -------->HVH21                                                   --------->TGA1a -----O2                                                          <---------TGA1a ---->O2                ---------->DOF2                        ------>ZmHOX2a(1) -----TGA1a       --------->TOE2(3)                       ----------------------->TaNAC69(2) ---->TGA1a       --------->TOE1(3)                     <---------ATHB12<-----------TGA1 ==================================bZIP_DOF          --------->MYB46(3)--------->bZIP60(2) --->HVH21   --------->ZAT14                       ----------->RAV1(1)----------->STF1 <----------DOF2   gggacgatgagtcagtatagccttagcaaaggccttcttccttctcttggagccaacaatcgttcctctcgtgacgtcattctccctcgcttcatcgtct  10901900                        <---------MYB52(1)                                                 <---------YAB1                     <-------TEIL                                              ----------->GT1                   --------->ARR14(2)                                         <---------TOE2(3)            <-----------HVH21                                             <---------At4g35610          ------>ZmHOX2a(1)                                               --------->At4g35610        ------>ZmHOX2a(2)   <-----------GT1                        <---------TOE1(3)      <---------AHL20(1) <----------DOF2   <---------ARR14(2)                              <---------TOE2(3)   --------->TOE2(3)   ctccttttgatcctcgttacaggtccgttttttcaaattttgactctgttttaatctaatcgctaaattagggtttagctgaggtaaaacattatttttc  10902000                                       --------->ZAT2                                       <---------ZAT2                                   --------->ANAC46                                   <---------ALFIN1                                  <---------REM1(2)                         --------->ANAC58        <                                  --------->ZAT14                           --------->ANAC58    -----   --------->ALFIN1          <---------ZAT18                       <---------ARR14(2)           <---- <---------ANAC58            --------->ZAT18         <----------DOF2      ---------->DOF2       ----- <---------ANAC46        <-----------RAV1(1)        <---------DAG2 --------->ARR14(2)--------->AtMYB61 <---------ANAC58 ---------->ID1  <---------ZAT14<---------ALFIN1 <---------GLK1(1)  <---------ALFIN1   agagcgtgggagacgtttttggtgtttttggtgctctacacagcttgggcatcaccttttgaatttgggtttctgcaaaagccaagaccacctctcagta  10902100  Previous    Next  AGI:  At2g25600.1    Description:  SPIK (SHAKER POLLEN INWARD K+ CHANNEL); cyclic nucleotide binding / inward rectifier potassium channel/ potassium channel. Identical to Potassium channel AKT6 (AKT6) [Arabidopsis Thaliana] (GB:Q8GXE6;GB:Q9SLA3); similar to AKT5 (Arabidopsis K+ transporter 5), cyclic nucleotide binding / inward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT4G32500.1); similar to AKT1 (ARABIDOPSIS K TRANSPORTER 1), cyclic nucleotide binding / inward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT2G26650.1); similar to potassium channel [Solanum lycopersicum] (GB:CAA65254.1); similar to potassium channel [Solanum tuberosum] (GB:CAA60016 Range:  from: 10901564    to: 10905447    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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