Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                                 ----                                                                                            ---------                                                             --------->YAB1                --------->DAG2                                                       --------->YAB1                      <---------TOE2(3) <----------DOF2 --------->At4g35610                  --------->AHL20(2)                 ---------->DOF2 ------CCA1(2)<---------YAB1                      --------->ICU4                      --------->AHL20(2) ->ID1    <-------GAMYB              <----------DOF2--------->TOE2(3)  --------->YAB1 <---------AHL20(2)   tttctttatttcggttatcatctgtatttgggccttagcctttgtttttgtattcattaaaaatcaaaacgaataataagtctaatattaaaaaaggtta  10863100                      <---------AHL20(2)                      <---------AHL20(1)                      --------->AHL20(2)                   <--------ATHB1                   <---------AHL20(2)                   <---------ICU4                   --------->ATHB51                   --------->AHL20(2)                           --------->ANAC46          <---------GLK1(1)                                     --------->ANAC55(2)         <---------ARR11(3)                                     --------->ANAC58         --------->ARR11(3)                                     ----------->GT1   <---------YAB1 <---------YAB1                                --------->ANAC58  <---------AHL20(2)  --------->AHL20(1)               --------->AHL20(2) ---------YAB1    --------->ICU4                       --------->YAB1 -------ICU4    --------->YAB1    --------->YAB1      <---------YAB1 ------>YAB1   <---------YAB1  <---------ICU4 <---------AHL20(2)--------->ANAC55(1) ------YAB1  --------->YAB1 --------->ANAC55(2)    <---------AHL20(2) ----->ICU4 <---------YAB1  <---------ANAC55(2) <---------AHL20(2)              ----------->GT1 -->GT1 <<<<<<<<<RAP2.2<---------AHL20(2)     <---------YAB1    <---------ANAC55(2)           <------   ttattattttagatatcataataatttaatacataatcacaaacaaatattattttataatataacacgtaaatacaaaaatttgttaaaaatgagttct  10863200                                                                  ------>ZmHOX2a(2)                                                                <---------ARR11(3)                                                                --------->ARR11(3)                                                           <---------AHL20(2)                                                    <------ZmHOX2a(1)                 --------->ARR14(2)    --------->ARR14(2)       ----------->GT1        =====================HOX2a_HOX2a  <---------ARR14(2)    <---------ARR14(2)     --------->ICU4         <---------TOE2(3)<----------DOF2 <---------ANAC46 ---ZAT14               <---------YAB1    <---------YAB1  --------->AHL20(2)--------->YAB1   ctgcaatatcgggttcttaacccagtataattagtaatacaaatatgaaaataaggaatataaaatgatcttttaaaatcatatggcgaattggctattg  10863300                                              --------->ANAC55(2)                   ----------->RAV1(1)        <---------ANAC55(2)           ------>MYB83                 --------->AHL20(2)           ------>MYB46(1)     --------->HSFB2a(2)      <-----------GT1          <---------HSFB2a(2)              <------NtERF2  <----------DOF2 <----------ID1     --------->YAB1 ------>ZmHOX2a(2)          <----------DOF2   aagacttttcaccaaataatacaacaaaaacttcgagactcataaaataagtgatccaactaagtcgtcgatgactataagcttttaagtctctcgctag  10863400                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                          --------->TOE2(3)                                                          <----------DOF2                                                       --------->ARR14(2)                                                       <---------ARR14(2)                                                       <---------ARR11(3)         <---------GLK1(1)                             --------->ARR11(3)         --------->GLK1(1)                             <---------ARR11(1)        <---------GLK1(2)                             <---------ARR14(1)    XXXXXXXXXXXXXXXXXXXX>MIR396B                      <---------CCA1(2)      *TSS  <---------ZAT14                                   --------->AtMYB61    <---------AHL20(2)  --------->ZAT14                                --------->ANAC46        <---------YAB1            <-  --------->ETT(2)        ---------->ID1        --------->MYB46(3)     --------->YAB1         <------  <---------ETT(2)    <----------DOF2         <-----------GT1       <----------DOF2           -------   actgtccacagatttcttcatcttctttgtctcttagcctttctatattatccaccatatctttaaatttcttttataatttgctgtatagcctatataa  10863500                                                                                                  ---                                                                                                  <--                                                                                              -------                                                                                             --------                                                                                             <-------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            <--------                       --------->ANAC58                                                     ---------         --------->ATHB12                                                                 --------->ARR14(2)        <---------YAB1 --------->ANAC58       <---------At4g35610          ------>ZmHOX2a(1)<-------- ------TEIL        --------->YAB1             --------->At4g35610       ------>ZmHOX2a(1) <---------ARR14(2) ---AHL20(2)   --------->ZAT6                <---------TOE2(3)        xxxxxxxxxxxxxxxxx>smallRNA(si3) -->AHL20(2)----------->HVH21          <---------KAN4(2)    <---------TOE2(3)  <<<<<<<<<TBF1<--------   atgcataaccatgagtgacactaataagcaaaataagagggaatattaagatgacatctactatggttctattcctccttcttcttcttgtgtttccgca  10863600     --------->DAG2    ---------->DOF2 ---->MYC3 -----MYC3 -->LBD16  --------->STY1(1)                                                                        < ------->AGL15                                                                                   <--- --------AGL15                                                                                  ----- -------->AGL3                  --------->ANAC46                                               <----- ---------AGL1             --------->GLK1(1)                                                <-------- ---------AGL3           <------ZmHOX2a(1)<--------P                              <---------YAB1<---- ---------AG     <---------ALFIN1      <---------TOE2(3)                    --------->ICU4 --------->TOE2(3) -------->AGL1  <---------ZAT18 --------->LBD16 <----------DOF2      --------->LBD16      --------->ANAC55(2) -LBD16    <---------STY1(1)   <---------HSFB2a(2)                  <---------TOE1(1)    <---------TOE2(3) ---------AGL2  --------->ZAT18--------->HSFB2a(2)                  <---------ANAC46    <-----------GT1   tatggataaagccctaggcgcacacgaggaatcccagaaacaaggttagtcttttggtattttagatgttccgaggtcattagtatcattttacgttatt  10863700      <---------ANAC46 ---------AHL20(2) ------AHL20(2) ---->AHL20(2)          <<<<<<<<<<MYB80                                  --------->YAB1           <-- ----YAB1       <---------YAB1                                        ---------->DOF2             --- -MYB52(1)      ------>ZmHOX2a(1)             ------>ZmHOX2a(1)   --------->ZAT18            -------- -----AHL20(2) <-----------------AGL2     <-----------GT1         --------->At4g35610       ---------   aattagttgtgtttaatcctgattttggtttgaattttggaatttctcctcatttgaatagacaaatgagcacaaagatgatcaaacattgacactgtaa  10863800                              --------->ZAT18                          --------->MYB111(1)                         <--------P                       <---------ANAC46                       --------->ALFIN1                                                            --                     <---------ANAC46                                                              --                     <------MYB83                                                                <---                     <------MYB46(1)                                                        ---------                    <---------AtMYB61                                                      <---------TOE1(3)                    --------->ALFIN1                                              <---------AHL20(1)                <---------ANAC58                                                  <---------AHL20(2)                <---------LBD16                                                   --------->ARR11(3)            <---------DAG2<---------AtMYB61                                       <---------ARR11(3)           <---------ANAC58   <-------TEIL                   <---------YAB1       --------->AHL20(2)           <---------ANAC58<------MYB46(1)               <----------DOF2          --------->AHL20(1) <---------AHL20(2) <---------DEAR3(1)                --------->ANAC58   --------->ANAC58  <---------TOE2(3) -------AHL20(1)<---------ANAC46                      --------->ANAC46   <----------ID1  ============ ------>AHL20(1)<---------ANAC58   ---------->DOF2    --------->ANAC58   --------->ANAC58============ ->At5g28300<----------DOF2<------MYB83      --------->YAB1<-----------GT1       --------->AHL20(2)-- -->GT1  --------->ICU4<---------REM1(1)   -------->P------->TEIL   ------>ZmHOX2a(1)    ------>ZmHOX2a(1)   tatataatgtaatgcttttcgggtggtgtaggtgcagaaaagacttaccatgatgcacgctttactattcctattaagccaaaatatattcctaaggtta  10863900                            --------->LBD16                           --------->HSFB2a(2)                --------->ARR14(1)                --------->CCA1(2)                <------ZmHOX2a(2)               --------->AGP1<---------MYB52(1)               --------->ARR11(3)               <---------ARR14(2)              --------->RVE1(1)                                                         <---------ARR11(3)           ---------->DOF2 <---------HSFB2a(2)                                          --------->ARR11(3)      --------->ANAC46     --------->ANAC55(2)                                      --------->LBD16      --------->ANAC58     <---------ANAC55(2)   <-------MYC2                    ----------->RAV1(1)      --------->ANAC58    <---------LBD16        ------->MYC2                    --------->DEAR3(1)     --------->SPL7--------->LBD16               <-------MYC4                   --------->ANAC46    <---------ALFIN1  <----------TaMYB80         ------->MYC3                  ------>NtERF2   <---------SPL7  ------>NtERF2                 <-------MYC3                 --------->ANAC46 --------->ANAC46------>ZmHOX2a(2)         --------->DAG2                     <---------ALFIN1 ------->ANAC58--------->ARR14(2)        ---------->DOF2                      --------->DEAR3(1) ------->ANAC58<---------ARR11(3)<---------ARR11(3)                         ------>ZmHOX2a(1) --------GT1 ----------->ARR10<---------GLK1(2)<-------TEIL                 <---------ATERF1(1) -->GT1------>NtERF2----------------->AGL1---------->DOF2                  <---------ALFIN1    ------ =======================HOX2a_HOX2a    --------->HSFB2a(2)               ------>ZmHOX2a(1) <--------- ======================HOX2a_HOX2a     <---------HSFB2a(2)         <-----------GT1 <-----------RAV1(2) ------->ANAC46--------->ARR11(1)--------->ARR11(3)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <-   tacgccctacgccaaaagatccgcctattccggaatgtcttcgaaaaggcacatgtagtcgtcttcatttatctcctcctccgccccagaggtctttcaa  10864000  Previous    Next  AGI:  At2g25510.1    Description:  unknown protein Range:  from: 10863477    to: 10864234    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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