Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------AHL20(2)                          <---------AHL20(2)                          --------->AHL20(2) <---------ARR11(3)                        <---------AHL20(2)   --------->ARR11(3)                        --------->AHL20(2)  <---------CCA1(2)                      --------->AHL20(2)--------->AHL20(2)                      <---------AHL20(2)<---------AHL20(2)                    <---------AHL20(2)<---------AHL20(2)                    --------->AHL20(2)--------->AHL20(2)        --------->GLK1(2)                  --               ------>ZmHOX2a(2)    --------->AHL20(2)     <------ZmHOX2a(1)                       <-              <------ZmHOX2a(2)     <---------AHL20(2)  <---------HSFB2a(2)                        <-             <---------AGP1 --------->AHL20(2)         ------>ZmHOX2a(2)                           <-             --------->ARR11(3)   --------->AHL20(2)  <------ZmHOX2a(2)                      --------             --------->AGP1 <---------AHL20(2)        --------->CCA1(2)                      -------- >GAMYB      <---------ARR14(2)   <---------AHL20(2) <---------ARR11(3)          --------->ZAT6   <-- ->MYB46(3)  <---------ARR11(3) --------->AHL20(2)   --------->ARR11(3)       --------->ZAT14-------- >At4g35610  --------->ARR14(2) <---------AHL20(2)   --------->AGP1 --------->ANAC58       ---------- -At4g35610 <---------CCA1(2) --------->AHL20(2)     <---------AGP1 --------->ANAC58     ------>ZmHOX2a(1)   caaaactaaaactcagatctatatatatatatatatatatatatatatatctatagatctaggaagaatcaagtcatcggtgaacactatcctataagcc  10857200              --------->ANAC58              --------->ANAC55(2)              --------->ANAC58              <---------ANAC55(2)             <---------TOE1(2)             --------->SPL7          --------->HSFC1(2)             <---------TOE2(2)       <---------HSFC1(2)           <---------SPL7           <---------DOF5.7(2) --------->TOE2(3)                 --------->ARR14(2) ------->ARR14(2)                  <---------ARR14(2) --------ARR11(3)               --------->ANAC46 ----------ARR10        --------->TOE2(3) --------ARR11(1)      --------->At4g35610                                <---------YAB1 ->ANAC58 --------->TOE2(1)     --------->ANAC58               <---------AHL20(1) ->ANAC46 --------->TOE1(1)     --------->ANAC58               --------->AHL20(2) -------CCA1(2)  ---------->DOF2<---------ANAC55(2)            <---------AHL20(2)                   - ->ANAC58------>ZmHOX2a(1)      --------->ANAC55(1)         --------->AHL20(2)                ------- >DOF2   <---------------AtSPL3<---------LBD16   --------->MYB52(1)   --------->WOX13(1) ---------->DOF2   aaatcttattcctcgtacgtaaatcacctcaaacacggaaacgtctaaatctaacagagaaataaaaaatttcaatctgataaatcaaattcaaagatga  10857300                          --------->ANAC46                          --------->LBD16                         <---------ATERF1(2)                         --------->ATERF1(2)                        <---------LBD16                        --------->RAP2.6(3)                       -------->P                --------->ICU4                       --------->MYB52(1)        <---------YAB1                   --------->HSFC1(2)    ------>ZmHOX2a(2)                   <---------HSFB2a(1)  --------->CCA1(2)                   <---------At4g35610  <------ZmHOX2a(2)                   --------->At4g35610 <---------ARR14(2)                   <---------HSFC1(2)  --------->AGP1                   <------ZmHOX2a(1)                <------ZmHOX2a(1)      <---------AGP1                 <---------TOE1(2)                ===============================HOX2a_HOX2a            --------->LBD16                ================================HOX2a_HOX2a          <---------HSFB2a(2)            <------ZmHOX2a(2)          --------->ARR14(2)            --------->HSFB2a(2)          ---           --------->ARR11(3)          <---------ARR11(3)            <---------LBD16              ---          --------->GLK1(1)            --------->ARR11(3)--------->At4g35610               <---------GLK1(1) -------->AHL20(2) --------->HSFB2a(1)--------->RVE1(1)  <---------At4g35610     --------->ARR14(2) ---->GT1 <---------GLK1(1)        ---------->DOF2--------->ATHB12   <-----------RAV1(2) --------->ATHB12   aaaaaaattcagagatcaggaagcttaccggcaaaactaaagatctgagacatgatttgagctcaaaactcccaggaaaaacgaaaacgcttgatttctc  10857400                                   ----------->HVH21                                   --------->TOE1(2)                                  --------->DEAR3(2)                                  ------>ZmHOX2a(2)                                 --------->CCA1(2)                                <---------ARR14(2)                                --------->AGP1                                <---------ARR11(3)                                --------->ARR14(2)                                --------->ARR11(3)                                               ----                               --------->GLK1(1)                                               ------          --------->ALFIN1     <---------GLK1(1)          --------->MYB52(1)                 <-------TEIL         --------->LBD16---------->DOF2                  --------->TOE1(2)                --------->CCA1(2) ------>ANAC58    ----------->GT1<------ZmHOX2a(2)      <---------MYB52(2)       ---------->DOF2 <--- ------>ANAC58---------->DOF2 ----------->ARR10  >>>>>>>>>TBF1     --------->At4g35610    --------->At4g35610   aagcgaaaacccgtgggaaagagcaaaaaagagagatccgacgaagatgaagaagaaaacgaacgaattagctccgattataccaaagagagagatgcac  10857500      <---------HSFB2a(2)    <------ZmHOX2a(2)   <---------ARR11(3)   --------->ARR11(3)                                                          ----------->GT1   <---------ARR14(2)                                                         =======================   --------->ARR14(2)                                                         <------ZmHOX2a(1)  ---- --->MYC3                                                                    ----------->GT1     ---- ->TEIL                                  ----------->GT1                  <------ZmHOX2a(1) ========= ----MYC3<------ZmHOX2a(1)           <---------ARR14(2)              <------ZmHOX2a(1)      <------ZmHOX2a(1)   atgaagatcgaggagatagagagcgaagaaaaccctatggatagggcaaaaaaaaaccagagagagagagaggagaggaaggagaaaaaaaacaggaaaa  10857600                                                                          <---------At4g35610                                                                          <---------ZAT2                                                                    ------->TEIL          *TSS                      --------->AHL20(2)              <---------ARR14(2)        <-----------HVH21          <---------YAB1                   --------->ARR14(2)      ------>ZmHOX2a(2)   --------->CCA1(2)                        <---------CCA1(2)   --------->ATHB12      --------->ARR14(2)                  ------------>CBF  --------->ICU4         --------->ARR11(3)                 --------->ANAC58 ============HOX2a_HOX2a <---------ARR14(2)                 --------->ANAC58                    <---- ----->ANAC58            --------->ARR11(1)                 --------->ANAC46     <------------CBF ----->ANAC58       --------->WRKY18(1)                    <-------MYC3   --------->At4g35610   ----- ============HOX2a_HOX2a <---------ARR11(3)                ------->MYC3   --------->ZAT2 <-------TEIL   cgaaatgatcggtcagtaagaggtcaagatatgagttattatatacttagttgaaatttcacatgcaatgtatctgagctgagaattggggttcgtattt  10857700                          --------->ANAC46                        --------->ANAC58                        --------->ANAC58          --------->AHL20(2)    ---------->DOF2                                             ---------          <---------AHL20(2)---------->DOF2                                              --------->ANAC58    <---------MYB52(1)  --------->ANAC46         --------->CCA1(2)                       --------->ANAC58  <---------ANAC46     ------->GAMYB          <---------TOE2(3)                     <---------TOE1(3)  <---------ANAC58   --------->ZAT14          <---------YAB1                       ---------->DOF2  <---------ANAC58  ----------->RAV1(1)   <---------ANAC58           <----------DOF2<---------TOE2(3) -----AHL20(2)     --------->ANAC46       <---------ANAC46       <-----------GT1<----------DOF2    -- ---->AHL20(2)   --------->ANAC46         <---------ANAC58     <-----------GT1--------->ZAT18    <---   aatttcgtttattttattcccacaacacacaaaagaaagaagttgcttaagatagaccagttttttttcacctttgagagcgcgttaaggcaagttatga  10857800                                                                                             <-------                                                                                             --------                                                                                          --------->TGA2(2)                                                                                         <-----------TGA1                                                                                         <-----------HVH21                                                                                        --------->TGA1a                                                                                        <---------TGA1a                                                                                        --------->bZIP60(2)                                                                                        <---------TGA2(1)                                                                                        --------->TGA2(1)                                                                                        --------->ANAC46                                                                                        --------->bZIP60(1)                                                                                        --------->O2                                                                                        <---------bZIP60(1)                                                                                        <---------O2                                                                                       <-----------STF1                                                                                       <------NtERF2                                                                                      <---------DDF1                                                                                      ------>NtERF2                                                       --------->MYB46(3)             <---------ATERF1(1)                                                  --------->LBD16                    --------->DEAR3(1)                                            <------MYB46(1)                          ----------->HVH21    <---------MYB46(3)       --------->AHL20(1)   <---------HSFB2a(2)               --------->DEAR3(2)    <------MYB83             --------->AHL20(2)   --------->HSFB2a(2)               --------->ATERF1(1)    <------MYB46(1)          <---------AHL20(1)   ------>ZmHOX2a(1)            --------->MYB52(2)   --------->MYB59           <---------AHL20(2)  <---------LBD16  ================================bZIP_DOF >CCA1(2) --------------->AGL15             <------MYB83   --------->TOE2(3)   <-----------RAV1(1) ------->ALFIN1             --------->AHL20(2)   <---------ANAC46 <----------DOF2<---------RAP2.6(2) ------ANAC46            <---------ZAT6    --------->MYB59 <---------MYB59     <---------MYB46(3)   ggtgtttggttaccgagtttagttatagtattaaattgtttttgtttggttcctggaacaaccttactctttttgctacgtttgtggccgacgtcagcat  10857900                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                               <-----                                                                                      ------>ZmHOX2a(2)                                                                                      <--------------                                                                                      <--------------                                                                                      ---------------        <---------ANAC58                                                           -------->HAHB4----        <---------ANAC46                                                        <---------ICU4<------        <---------ANAC58                           <---------REM1(1)            --------->YAB1<------      <---------ANAC46                             ----------->GT1             --------->ICU4--------   <-----------RAV1(1)            --------->At4g35610        --------------->AtSPL8<---------ICU4<---  <---------TOE2(3)               <---------At4g35610   <---------ANAC46   --------->TOE1(2) <------- --At4g35610        <---------ANAC58             <-------GAMYB      --------->YAB1<---------ATHB12--- ->At4g35610        <---------ANAC58     <---------ATHB12    <---------------AtSPL8--------->YAB1----   cgtttatgttgtgtgttttttttcttgggagttttgagctgaaatcatgtgtgttgtaacttgtaagtactcataaacgtactaatgatcccaattgggt  10858000     <------ZmHOX2a(2)    --------->ARR11(3)    <---------ARR11(3) -------ANAC55(2) ------>ANAC46 ------>ANAC58                                                                      ------>NtERF2 ----SPL7                                                                           --------->PCF2 ---AGL1                                                                            <---------PCF5 ---AG                                                                             --------->LBD16 -->AGL1                                                                           ------>NtERF2 ----->ZAT18                                                                       <---------ATERF1(1) ---ANAC58                                                                         <-----------TCP11(1) ---ANAC58                                                                        --------->DEAR3(1) ->MYB59                                                                          --------->LBD16 ----TEIL                                                     ------->TEIL        --------->ANAC46 --------AtSPL8                                            <---------YAB1        <---------LBD16 ------>ANAC58                                   <---------ARR11(3)              --------->LBD16 ----->SPL7           --------->ANAC46       --------->MYB46(3)     --------->WRKY18(1)----------->RAV1(1)   acgcaagatcatgcctagttctatacttcacataaatgagacttccaacaacatctatcttatgaatgtggtcaagttgtttccccggcccacaaaaata  10858100  Previous    Next  AGI:  At2g25490.1    Description:  EBF1 (EIN3-BINDING F BOX PROTEIN 1); ubiquitin-protein ligase. Identical to EIN3-binding F-box protein 1 (EBF1) [Arabidopsis Thaliana] (GB:Q9SKK0;GB:Q0WM37); similar to EBF2 (EIN3-BINDING F BOX PROTEIN 2) [Arabidopsis thaliana] (TAIR:AT5G25350.1); similar to EIN3-binding F-box protein 2 [Lycopersicon esculentum] (GB:ABC24972.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83761.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44237.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553); contains InterPro doma Range:  from: 10854453    to: 10857610    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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