Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------AHL20(2)      --------------->AGL15                           <---------AHL20(1)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             --------->AHL20(1)      <---------------AGL15                        --------->AHL20(2) ------TGA1                                      <----------DOF2 ------HVH21                                     <---------DAG2  <----------DOF2             <------- -->ANAC46                               <----------DOF2      <-----------GT1             ---------->ID1 -->bZIP60(2)          xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    ---------->ID1 <---------ARR14(2)   cacaatttctcgtatgagtagttgtctatctaaatgtttgtgacttttgaactttatatatttgtcactttctaagtgaatcccaaatttttgttctttt  10849500                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 <                <---------YAB1               --------->At4g35610                                   --              --------->YAB1            --------->DAG2    <-----------GT1                 <----------             <---------YAB1            ---------->DOF2  <----------DOF2                <---------ICU4          <---------AHL20(2)   --------->AHL20(2)    --------->ARR11(3)            <-------TEIL  <--- ---DOF2  --------->AHL20(2)   <---------AHL20(2)    <---------ARR11(3)      <-----------GT1    -----   acacaaatttgttttattataaatccaaactaattaatctgtaaagtagctccaagttctttactctctaaactatttttaaacatacattatttcaata  10849600                                                                          <---------TOE2(3)                                     <---------AHL20(2)            <---------DAG2                                     --------->AHL20(2)         <-----------GT1 ---------TOE2(3)                 --------->AHL20(2)         <---------YAB1 -------->DOF2                   --------->AHL20(2)         --------->AHL20(2) -GT1     ------>ZmHOX2a(1)  --------->AHL20(2)     <---------MYB52(1)    <---------TOE1(3) ------YAB1            ------>ZmHOX2a(2)           --------->TOE2(3)     ---------->DOF2 ---->YAB1====================HOX2a_HOX2a     <---------HSFB2a(1)  <----------DOF2--------->AHL20(2)   ttaaagaaattcctctaatttttgatctaaaaaaaataaaaaattggcatcttcgttagaatttttatacttttttaaagttgattaaaaattcttcatt  10849700                                            ------->TEIL      --------->KAN4(2)               <---------AHL20(2)     <---------ICU4                  <---------YAB1                             ----------->GT1    <---------YAB1                --------->ICU4--------->AHL20(2)          <---------AHL20(2)   <---------ARR11(3)          <---------AHL20(2)        <<<<<<<<<RAP2.2    --------->AHL20(2)   --------->ARR11(3)          --------->AHL20(2)       <---------TOE2(3)  <---------WOX13(1)  --------->YAB1            <---------ARR11(3)<----------DOF2           <---------YAB1 <---------YAB1             --------->AHL20(1)--------->TOE2(3)     ------->TEIL<---------ZAT6   tctatgatcattccaaaatttgatttagaatatataatttttaatgaactttaaattttagattgcaatgtattttgatttattgttaaaaaaaactttt  10849800                                                                                             <-------                                                                                             <-------                                                                                      <------NtERF2                                                                                     ------>NtERF2                                                                                     --------->LBD16                                                                                    --------->DEAR3(1)                                                                                    <---------LBD16                                                                                   <------NtERF2                                                                                   <---------LBD16                                                                                   --------->ATERF1(1)                                                                                  ------>NtERF2                                                                              --------->bZIP60(1)                                                                              <---------bZIP60(1)                                                                          --------->LBD16 <---------DEAR3(1)           --------->TOE2(3)                                              ------>NtERF2 --------->ARR14(2)          <---------YAB1                                        --------->AHL20(2)<---------RAP2.3(1)         <---------ARR11(3)                                    <---------ATHB51<-----------HVH21         --------->ARR11(3)                                    --------->ICU4 <-----------RAV1(1)    <---------AHL20(2)      <---------ANAC58                   <---------AHL20(2)--------->ETT(2) ---    --------->AHL20(1)      <---------ANAC58         <----------DOF2     --------->ANAC46--------->ATERF1(1)    --------->AHL20(2)  <----------DOF2              <---------DAG2     <---------LBD16 <---------ARR14(2)   --------->AHL20(2)   <---------DAG2        <-----------GT1  --------->AHL20(2)<---------DEAR3(1)   taaaaaaaaattatcttagtttatgacttttcgtttcatatttgtttattacaaacttttttgaaataattttctccgcgatgtcgccggggtctgcgtc  10849900                                                                                             --------                                                                                <----------ID1                                                                                ----------->GT1                                         *TSS  ----------->GT1                 ----------->GT1        <<<<<<<<<<<<<<<<<LFY          <---------ZAT18                          ----------------------    <---------YAB1                    --------->ZAT14                       ---------->DOF2  <------- --ANAC58<---------ZAT14              <---------ZAT14      --------->AHL20(2)--------->MYB52(1)    -- --ANAC58------------>CBF  ----------->GT1  --------->MYB52(1)       <---------ZAT14       ---------- --->ZmHOX2a(1)           <---------TOE2(3)----------->HVH21         --------->ZAT14-----------------   ctagttattagtacaatggaatcaaactaatgtaaaactgtgaacttgacggaaaaaaaaaaaaaatactgtgaacagcaaagggaaaaaaaaaaaagaa  10850000                                                                                          ---------->DOF2                                                                                    <---------ZAT2                                                                                    <---------ANAC55(2)                                                                                    --------->At4g35610                                                                                    --------->ZAT2                                                                                    <---------At4g35610                                                                                    =================                                                                                    <---------TGA1a                                                                                    =================                                                                                    <---------O2                                                                                    --------->O2                                                                                    --------->TGA1a                                                                                    =================                                                                                    =================bZIP_DOF                                                                                  <-----------RAV1(2)                                                                                <-----------HVH21                                                ==============================================bZIP_DOF    <-----------HVH21                           <----------DOF2                 <-----------TGA1 --->GT1                                      --------->At4g35610            ------>ZmHOX2a(1) -->ANAC81                              ------->TEIL                        --------->TOE1(2) ---ID1       <---------ARR14(2)      <---------ZAT14                       --------->TOE2(2)   <---- ------->AHL20(2)       ------>ZmHOX2a(1)     <---------At4g35610        --------->ARR14(2)     ----- >DOF2        --------->ARR14(2)      <---------ZAT18                    <---------ARR14(2)     <---- ------->ANAC81   ------>ZmHOX2a(1)   --------->ZAT14              --------->YAB1<---------MYB52(1)   aaaaaatgtcagaacaaatccttctcctccattgagacagtgtacttctgcttcaatggacatttgatatcatcaaatcctgcgtcaggtgagaaagacg  10850100             --------->GLK1(1)             <---------GLK1(1)       <-----------HVH21     <---------MYB52(1)    <-------GAMYB ===========MYC_MYB                                                                    --------->ARR14(2) ============================bZIP_DOF                                   --------->GLK1(2) =================================bZIP_DOF                              ------->TEIL   <---------ARR14(2) -----HSFB2a(1)                                                    <---------AtLEC2    ------->TEIL ---->HSFC1(2)         <----------DOF2                   --------->ETT(1)             <---------CCA1(2) -----HSFC1(2)    <----------DOF2                        <<<<<<<<<<AtTINY2        <---------ANAC46   cttcgccgttgtcagagttccttttctttattctctgtagaaactagaggcaaaaaatgtcggaagttttcatgaatctgagtaacttgtatctgcttct  10850200                                                                                           --------->CCA1(2)                                                                                          --------->ARR11(3)                  --------->LBD16   <-----------HVH21        --------->At4g35610          <---------ARR11(3)                 <---------ANAC46 <------------AtMYB77       <---------At4g35610    <-----------GT1          <----------DOF2       <---------AGP1      --------->ZAT6         --------->MYB52(1) <------   gtttacatgtttctttggtccgtagatcgaagtagaactgtcacttacagtttaagactagtaagctcattactaaacaactgtattaacaagatttagg  10850300                                                                                                 ----                                      <---------At4g35610                                       <----          --------->YAB1   <---------ANAC58                                             <---------AtLEC2      <---------AHL20(2)   <---------ANAC58                                           <---------AHL20(2)      <---------YAB1  <---------GLK1(2)                                               <-----------GT1 <----------DOF2      --------->ARR14(2)----------->GT1                        ----------->GT1  ----- ---TOE2(3)         ----------->ARR10 --------->At4g35610             <-----------RAV1(2)   ---------   cttctttttttattagaatgtttagatttgcttctaattcagatgtaattttagtttattcaatctcaagaaccagacgatgagttatttacatgaaaga  10850400  Previous    Next  AGI:  At2g25480.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32330.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32330.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44238.1); contains InterPro domain Targeting for Xklp2 (InterPro:IPR009675) Range:  from: 10849941    to: 10852776    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version