Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               ----------->RAV1(1)                                                                            --------->REM1(1)       -                                                                           <------NtERF2            -                                                                          ------>NtERF2             <                                                                     --------->SPL7                 <                                                       <-----------HVH21  ----------->RAV1(1)      <-                                              <---------ARR11(3)   <---------SPL7                 ---          --------->HSFB2a(2)                 --------->ARR11(3) <------ZmHOX2a(2)                --- -----TOE1(2)                               ----------->GT1     <---------ARR11(3)               ---- >ZmHOX2a(1)                              ---------->DOF2       --------->ARR11(3)        XXXXXXXXXXX   ggattccaacttccctaacattgttcgtctcgagattgtagtagaaaagataataagggtcagatagatcatacggcgacaacacaatttcactagtacc  10819900             <---------ANAC55(2)             --------->ANAC46         ---------->DOF2                                           --------->ANAC58 ------->ATHB1                                                     --------->ANAC58 -------->YAB1                                                    <-------TEIL ------------ATHB5         --------->ANAC58        --------->DAG2--------->CCA1(2) ---------ICU4--------->LBD16                    ---------->DOF2 --------->ARR14(1)              ---- --------ATHB12            --------->ANAC58<---------ALFIN1     --------->ARR14(2)     <---------ANAC58 --->MYB46(1)--------->ANAC58     --------->ARR11(3)            <---------ARR14(2)     <---------ANAC58 --->MYB83   --------->ANAC58     <---------ARR11(3)            --------->ARR11(1)   <-----------GT1 ----->WOX13(1)         <---------MYB46(3) ----------->RAV1(1)  <---------GLK1(2)   <<<<<<<<<<GT-3b XXXXXXXXX>MIR4227     <---------AtMYB61  --------->ANAC46    ----------->ARR10  ------->TEIL   -----   aatcattccaacaatgcgcaacttggtggtcgcaacgatattccaccacataaaaggcaatacatagatacgcttcgtccatgtatttttcttgacatcc  10820000                                                                         <-----------GT1                                                                        --------->WRKY38(1)                                                                        --------->WRKY12                                                                   <---------MYB59                                                                  --------->ANAC58            <---------ATHB12                 --------->LBD16      --------->ANAC58   --------->GLK1(2)                        --------->LBD16       --------->ANAC46   --------->ARR14(2)                      --------->LBD16     --------->ARR14(2)   <---------ARR14(2)            <---------ATHB12              <---------ARR14(2)     --------->WOX13(1) -->ZmHOX2a(1)     <----------DOF2        <---------LBD16----------->HVH21        ----------->GT1 ---->TOE2(3)--------->YAB1    --------->WOX13(1)     --------->ZAT6    ----------->HVH21   tcaagaatccacaaatcaaaacttttactggttcaatcaattttccccgagtttgaacactgacatatacccaattgacccttctggttaatcagtttcg  10820100                                                --------->TOE1(1)                  ------>ZmHOX2a(1)                --------->At4g35610            <---------HSFB2a(2)             <---------ARR14(2)          <---------ARR11(3)                   --------->HSFB2a(2)             <---------ARR11(3)  <-          --------->ARR11(3)      ---------->DOF2                              --------->ARR14(2)  --  <---------ZAT6<---------At4g35610--------->DAG2     ----------->HVH21  --------->YAB1   --------->YAB1   actagtgtttgatatctaatctgccaagttcgccgataaagctcaacttctcggacttgacatcaaaacaaactataacaaaatcctccctatcgcaatt  10820200                                                                                                    <                                          <-----------HVH21                       ------->GAMYB *TSS-                                  <---------ARR14(2)                             --------->MYB46(3) -                                  <-----------ARR10                    --------------------->WRI1   <         <---------ARR11(3)       --------->ARR14(2)                ----------->RAV1(1)        <----- --------At4g35610               <---------GLK1(1)                  <<<<<<<<<<<<<<<<<LFY  <---------ICU4 ------->At4g35610           --------->AtLEC2        <------ZmHOX2a(1)--------->ATHB12   <---------ATHB12   gagcttaccgagataatacaaaacaccattgatgcaaatcccagcgtcaaatacaggacgaagaggtttgcaacattggagcaatcgccaaatcatttta  10820300                                                                                                  ---                                                                                                -----                                            ------------>CBF                         --------->ANAC46         <-----------HVH21                 --------->YAB1                            --------->ANAC58     ------>ZmHOX2a(1)              <-----------GT1                                  --------->ANAC58 ---------At4g35610               <---------YAB1                         ----------->GT1        ----- -------->ZAT2                  <---------ICU4                           --------->ALFIN1      ------ -------->At4g35610             --------->YAB1                 <---------ALFIN1    --------->ANAC46 ---------ZAT2                 <---------YAB1      ----------->GT1 --------->HSFB2a(2)  --------->AtMYB61 ------GT1  >>>>>>>GRF7        --------->ICU4    ---------->DOF2   <---------HSFB2a(2) --------------   ccagctcctaatgtcaggctctctactaggcttattattatccactcacaataaagaaaaattcaacacctagaagtgtgaaaacacacaccaaaaccag  10820400        ----------->GT1     <---------YAB1  --------->ICU4              <---------ALFIN1 -------->RAV1(1)            --------->At4g35610                  <---------ZAT6 ---->ZAT2                   <---------At4g35610                ----------->GT1                  ---- ---->At4g35610            --------->YAB1          ----------->RAV1(1)                     --------->GLK1(2) --->ANAC46              --------->GLK1(2)         --------->MYB52(1)                  --------->YAB1 --->AGL2            --------->YAB1   ---------->DOF2 ------->GAMYB              ------->TEIL--------   cagcattatgagataaaaacatatcagaatcagcaccttcaaaagtctgaaaacaacagcatgttatagtgaaaacacatttgcacctaaaataatctaa  10820500                        --------->MYB52(1)                         <---------AHL20(1)     <---------AHL20(1)                     --------->ANAC46                              --------->AHL20(2)     --------->AHL20(2)                    <------NtERF2                                  <---------AHL20(2)     <---------AHL20(2)                    --------->LBD16   <---------ICU4              --------->AHL20(2)      --------->AHL20(1)                    --------->HSFB2a(2)                      --------->YAB1 --------->ATHB12      <---------ICU4<---------HSFB2a(2)--------->RAP2.6(3)   --------->TOE2(3)     ------>ZmHOX2a(2)   --------->YAB1 --------->ZAT18     --------->ATHB12    <-----------GT1  --------->ICU4 --------->ARR11(3) ----->YAB1       <---------LBD16  <---------AtLEC2    <----------DOF2     <---------YAB1 <---------ARR11(3) ->TOE2(3) <---------ANAC55(2)<---------MYB46(3)      <---------ICU4    <---------YAB1   --------->AHL20(2)   aataagcataatcacctaagtccgcgaaacggttgatgcatgatggccttagttaatctttaaccatattaaatttgattattgatctaaaatatattga  10820600                  <---------AHL20(2)                <---------RVE1(1)               <---------GLK1(2)               --------->ARR11(3)                           <---------AHL20(2)  <---------AHL20(1)                                    <---------AHL20(2)  <---------AHL20(2)                     <---------YAB1 --------->AHL20(2)                   <------ZmHOX2a(1)  --------->AHL20(1)                    <-----------GT1 --------->AHL20(1)                 <---------TOE1(3)  --------->AHL20(2)               --------->AHL20(2)   <---------AHL20(1)                 <---------TOE2(3) --------->AHL20(2)                <---------AHL20(2)  --------->AHL20(2)          --------->YAB1 <---------AHL20(2)             --------->YAB1  <---------AtLEC2  ------->TEIL    <---------YAB1   --   caaataaattgttttcagattttttttttgacatttataaattttcattttcatgaaataaatttatgaaccaaaacatatgttatgacaattaaggaag  10820700                                                                                                   <-                                                                                                   --                                                                                                   --                --------->YAB1                                                                     <-               <---------ATHB12                                                                 -----              ------>MYB83                                                                      <----            <---------MYB59                                                                    ------            <---------MYB46(2)                                                              <--------      <---------ICU4                                                                      --------->ATHB12     <---------YAB1                               --------->YAB1                         ============  ------>MYB46(1)                               ------>MYB83                             ------>ZmHOX2a(1)  ------>MYB83------>MYB46(1)                   ------>MYB46(1)                          <---------YAB1 ----------->RAV1(1)                          <---------MYB59                          ------>ZmHOX2a(2) ------->MYB46(3)    ------->TEIL             <---------MYB46(2)          ----------->GT1============   aaccaacatcattaccaaacatgaacttcaaaaatcccaataccaataccaaacataactccaaaacatttgagcctagtaacttctgatcctgattgca  10820800  Previous    Next  AGI:  At2g25390.1    Description:  pseudogene, hypothetical protein Range:  from: 10819694    to: 10820296    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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