Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->ATHB12                                                                               <---------AHL20(2)                        --------->TOE1(3)                                     --------->AHL20(2)            --------->ATHB12                                                --------->YAB1           <---------YAB1  --------->AHL20(2)                      --------->ALFIN1        --------->WOX13(1) -------->DOF2          --------->TOE2(3)                       <---------TOE2(3)<---------WOX13(1) ------AHL20(2)       <---------TOE2(3)                    <---------ARR14(2) <---------AHL20(2) ---->AHL20(2)       --------->MYB52(1)                   <------ZmHOX2a(1) --------->TOE2(3)<-------   taaaagaaacaacatgattcgtctaacgataaattgataagttttgggagatggattagaggaactagggtttggcaatattaattgaaaaatcaatcga  10810900                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                           <---------AHL20(1)                                                     --------->YAB1                                                 --------->AHL20(2)                                                 <---------AHL20(2)                                                <---------ATHB12                                   <-                     --------->YAB1           --------->WOX13(1)                                -----                     <---------ICU4      ---------->DOF2   --------->AHL20(2)                   <----         --------->MYB52(1)   --------->ABI4(2) --------->ICU4   <-----------GT1                <----         ------------>AtMYB77 ------>NtERF2--------->ANAC58<---------AHL20(2)                   ----- --ATHB12--------->YAB1 --------->MYB52(1) --------->ANAC58--------->AHL20(1)                   <----   taccaatacaataacagttacaaacattacggtgccttcatagcaaagcaattaataagaatttatttgacaacttctctcttatatataagtcttcaga  10811000                                                                                  --------->LBD16                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                           <---------------AGL15                                                                    <---------GLK1(2)  <---------GLK1(1)                                                                  ----------->ARR10    --------->GLK1(1)   ------>ZmHOX2a(1)           --------->ANAC58               ------>NtERF2--------->TOE1(3) ----------GT1               --------->CCA1(2)               --------->DEAR3(1) <---------LBD16 ---->ARR14(2)    <----------ID1                    <---------------AGL15  --------->YAB1 -----ARR11(3)    --------->ANAC58                  --------------->AGL15  --------->TOE2(3)     ---- -----GLK1(2)--------->AtMYB61 --------->ANAC58    <-----------------AGL3 ----------------->AGL1 ---- ---->ARR11(3)    --------->ANAC46                 ========================================MADS_MADS- -----ARR14(2)    --------->ANAC58  <------ZmHOX2a(2)   --------->MYB52(1)----------------->AG<------   ttttcctacttgaaaccaaaacgacatggagagacgcgatcaagacttgagttactaaaaacggcgactagattctaccataaccggagatttcccaaac  10811100                                            --------->REM1(2)                                  <-----                                         <---------ANAC46                                   <--------                                       <---------ZAT2                                       <------MYB83                                       <---------ZAT14                                      <------MYB46(1)            <---------MYB46(3)         --------->ZAT2                          --------->ZAT18<------           <--------P                  --------->ZAT14                         <---------ZAT18-------  --------->DAG2                       --------->At4g35610                <------------CBF <---------MYB46(3) ---------->DOF2                --------->ANAC46                    --------->ETT(2)       <---------AtMYB61 ----->TOE2(3)               <---------ARR14(2)                  <---------ANAC46          --------->MYB46(2) ----->TOE1(3)               --------->ARR14(2)                  <---------ANAC58          --------->MYB55(2) --------->DOF2   --------->ZAT14      <---------At4g35610       <---------ANAC58          --------->MYB111(1) ---ALFIN1<-------GAMYB     ------>ZmHOX2a(1)             ------------>CBF<---------GLK1(2)--------->MYB111(2)   cctaaaggcgagggttgttctacagtcgtcctatccgactctgctgtgaagaagttttcagacaatgtcgtctacagattgtacaccaagggtttggtgg  10811200      --------->ANAC58      --------->ANAC58  <------MYB83  <------MYB46(1)  --------->ZAT14 ----MYB46(3)      --------->REM1(2)                                                              <-- -ANAC46<------ZmHOX2a(1)                                  --------->GLK1(2)                      <-- ---AtMYB61       <---------MYB52(1)                   <------ZmHOX2a(1)                  --------->ANAC46 -->ALFIN1---------->DOF2                             ----------->GT1       ---------->DOF2----------   tggaaggtaaggaaaagaccgtgaagtctggattagagttgcgatttgcgatgagaaggagaatttgttgtatgagattaaagaatcactaagcgacact  10811300                                                  --------->ARR14(2)                                         <-------GAMYB             <------ZmHOX2a(2)                                       <---------TOE2(2)           --------->At4g35610                                       <---------TOE1(2)      <---------LBD16       --------->ATHB12       <-------TEIL                  <---------LBD16  ------>ZmHOX2a(1)           <----------DOF2    --------->At4g35610             <---------ANAC46  ====================HOX2a_HOX2a       ---------    <---------At4g35610             <---------ANAC58 --------->TOE2(2)       <---------ANAC58     --- -------TOE2(3)                     <---------ANAC58 --------->TOE1(2)       <---------ANAC58     --- -------YAB1                     <---------GLK1(2)--------->GLK1(2)<---------At4g35610      --------- ->RAV1(1)                     --------->ICU4     <---------ARR14(2)         <---------ANAC46    ----   aagattagctgcatagaagtagagagcatggcactgattcgtgggttaagagaatccttcgatttggggatcagacaagtcgtggtttattgcgatgacc  10811400                                                                                                <----                                                                                                <----                                                                                                <----   <---------DAG2                                                                     <------MYB46(1)   <----------DOF2                                     <---------HSFB2a(2)            ----------->GT1 >WRKY12                                  <----------DOF2                             <------MYB83 --->MYB83                               <---------ANAC58                           <---------WOX13(1) --->MYB46(1)                            <---------ANAC58    --------->ALFIN1      <---------GLK1(2) >WRKY38(1)  <---------ANAC55(2)   <---------YAB1   --------->ARR11(3)             --------->ARR14(2) ----->MYB52(1)                <----------DOF2 <XXXXXXXXXXXXXXXXXXXXXMIR840        <---------ARR14(2)   aactgctttaccaatatgtaagtgttttctcttctttgttattgctttagtttagttcttgaagtgtggaaatagttagaggccagattggtgattttgc  10811500                                         <---------ANAC58                             <------MYB83                                         <---------ANAC58                             <---------MYB46(3)           <----------DOF2             --------->ARR11(3)                         <---------MYB46(3) -----AtLEC2                  <---------YAB1                          <-----------GT1<---------AtMYB61 -----ANAC58                --------->YAB1           --------->YAB1 <---------WOX13(1)<------MYB46(1) -----ANAC58               --------->ICU4<---------ANAC46        <---------YAB1 <---------GLK1(2)   atgttagaatatactttgaattctttggaatgatgatataatgtcttggttttaatgagagtgaattctgatttacattacagattgttggtcgagggaa  10811600                                                                                     --------->MYB52(1)                                                     ----------->HVH21       <---------WOX13(1)                                                   --------->CCA1(2)        <---------ANAC58                                                   --------->At4g35610      <---------ANAC58                                            --------->HSFB2a(2)            --------->ATHB12                                            <---------HSFB2a(2)           <---------YAB1  -----------                                            <---------HSFC1(1)     <---------At4g35610<---------TOE2(3)                              ------->TEIL  --------->HSFC1(1) ----------->TGA1      <---------DOF5.7(2)   gattaagaagaaggttgtccatcttgtggacgaatttcaacttcttctagaagagatgacctatactgacgctgatttgattgcccttaacgatgttaat  10811700                                                       --------->CCA1(2)                                                      --------->ARR11(3)                     <-------  <----------DOF2                                     <---------ARR11(3)              <---------ANAC58 <---------ANAC58                                   ----------->ARR10                 <---------ANAC58 <---------ANAC58   --------->ANAC58               <------NtERF2                   <---------DEAR3(1) >GT1               --------->ANAC58       ----------->HVH21                 --------->MYB52(1)    <-   tttgcttttaaacttgcaagagaagccatagtttcaagggacgatgtgaaggcagagatatgtagcatttgttttgaagaaaccgagggcgagcgcatgt  10811800  Previous    Next  AGI:  At2g25355.1    Description:  exonuclease-related. similar to RNA binding [Arabidopsis thaliana] (TAIR:AT4G32175.1); similar to unknown [Populus trichocarpa] (GB:ABK93275.1); contains InterPro domain S1, RNA binding; (InterPro:IPR003029) Range:  from: 10808357    to: 10810801    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g25360.1    Description:  zinc finger protein-related. similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT2G25370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21795.1); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 10811328    to: 10812840    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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