Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->bZIP60(1)                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                                 ----------->GT1                                                                                 --------->ANAC55(2)                                                                                 <---------bZIP60(1)                                                                                 <---------ANAC46                                                                                ----------->STF1                                                                              ----------->TGA1                                                                            --------->MYB52(2)                                       <-----------GT1                   <-------GAMYB                                     --------->CCA1(2)                  <------MYB46(1)                                    <---------ARR11(3)     ---------->DOF2<--------P --------->GLK1(1)    ---------->DOF2   <---------ARR11(3)               --------->DAG2   <------MYB83---------->DOF2 <----------ID1----------->GT1      --------->ARR11(3)---------->DOF2   <---------MYB46(3) <---------MYB52(1) ----------->GT1      --------->ARR11(3)     --------->REM1(2)       ------------>MYB.PH3(2)     <--- --ZmHOX2a(1) --------->DAG2--------->HSFB2a(2)  ----------->GT1  ---------->DOF2<---------ANAC55(2)   aaaacgaaaaacgcagaaggtgaagagcttatagaatagatataccatgtacagagaaaagtagagcagaaagttggttagtgacgtaaatcccttattt  10808000                                                                      <---------MYB111(1)                              <---------AHL20(2)                      <---------MYB46(2)                              <---------AHL20(1)                      <---------MYB59                              --------->AHL20(1)                     <---------ANAC55(2)                    <----------DOF2     ------->TEIL                 --------->ANAC55(2)              --------->GLK1(2)         <---------ARR14(2)        <------ZmHOX2a(2)             <---------GLK1(2)--------->AHL20(2)        --------->ETT(2)------>MYB83             <---------ARR14(2)         --------->ARR14(2) --------->REM1(1)   ----------->GT1             --------->ARR14(2)     <---------TOE2(3)   <---------ETT(2)------>MYB46(1)     <---------ANAC58     <---------AHL20(2)        <-------MYC3--------->At4g35610     <---------ANAC58   --------->ANAC55(2)      <---------ALFIN1--------->ARR11(3) ------YAB1 <---------At4g35610  <---------WOX13(1) ------->MYC3<---------At4g35610          --------   tgaatatgcgagtcagattcttctttatgtaattaattgatgtatatgcacacacatgtctacatcagatcacctaatccattgtaaaattcgaaaccat  10808100                                     --------->WOX13(1)                                    --------->MYB46(3)                                   ------>MYB83          <---------ZAT14                                   ------>MYB46(1)       <---------ZAT18                               -------->P   --------->YAB1                              ------->GAMYB<---------ATHB12   <---------MYB46(3)                             <---------MYB111(2)         --------->ZAT14           <---------ANAC58  <---------MYB52(2)      --------->ANAC46           <---------ANAC58  <---------MYB55(2)   --------->ETT(2)  <---------YAB1             --------->MYB46(3)   <---------WRKY38(1)        ---------->DOF2 ->MYB46(3)<---------ANAC46  <---------MYB111(1)  --------->ZAT18     --------->GLK1(2)       -------   cagtgtcattgtttcttgttcaccaaaaacaactaccatccatcactcatggtccacagagcagtcgttgaaaatcagtgaaagaagtgtcattttgtcc  10808200                                                --------->ARR14(2)                                                <---------ARR11(3)                                                --------->ARR11(3)                                         --------->YAB1                                      ------>MYB83                                      ------>MYB46(1)                                 >>>>>>>>>>WRKY11                                 <---------WRKY18(1)                                 >>>>>>>>>>WRKY26                                 >>>>>>>>>>WRKY43                                 >>>>>>>>>>WRKY6------->TEIL                         ----------->GT1                                 >>>>>>>>>>WRKY38                                 --------->YAB1                                --------->WRKY12<---------AGP1                 <---------ICU4 <------                                --------->WRKY45<---------ARR14(2)       --------->YAB1       <------                                --------->WRKY38(1)                     <---------ATHB12    <--------                        <----------DOF2 <---------ATHB12          <-----------GT1<---------YAB1    ---------->DOF2<------ZmHOX2a(1)<---------MYB59        ----------->GT1    <---------------AGL15 --->ID1    <------ZmHOX2a(1) <---------At4g35610 ------>ZmHOX2a(2) --------->MYB46(3)  <---------AHL20(2)   caaaaaaaaaggaaggacgaaggagactttttagttgaccaaatcatatggatctactaaaccgaaataaaccactcataaccattatagtaaattactt  10808300                     ------>ZmHOX2a(2)                    <------ZmHOX2a(2)  --------->ANAC58                   --------->ARR14(2)  --------->ANAC58  *TSS <---------ZAT6 ---ANAC58         <---------ARR14(2)---------->DOF2 <---------TOE2(3)          <----------DOF2 ---ANAC58<---------AHL20(2)        --------->AtMYB61<---------TOE1(3) <---------TOE2(3)          --- -AHL20(2)--------->AHL20(2)  <---------ICU4     <----------DOF2       <---------TOE1(3)          <--   ggttcggagtttttaatttccgatcgtcttcaacatcaccaaagcaaaaaactttagggttttagtgttttttagggttcttctttctctctacctctca  10808400                                                                                                -----                                                                                                -----                                                                                            <--------                                                                                            ------>NtERF2                                                                                           --------->DEAR4(1)                                                                                           --------->RAP2.3(3)                                                                                           --------->At1g77200                                                                                           --------->DREB2C(2)                                                                                           --------->DEAR3(1)                                                                                           ----------    <----------DOF2                                                                        <---------ETT(1) ------>ARR14(2)                 <---------ATHB12                                         --------->RAP2.3(1) -------ARR14(2)      --------->ATHB12      <---------MYB46(3)---------->DOF2      <-----------GT1   gttctgcttttgctctgtctcccttcattggataaatcaattggtgttgttagcgaagaaataagaaagatgggtactgaagtttctacctcgccgacaa  10808500                       <---------ARR14(2)     --------->YAB1 <---------ANAC58   <---------WOX13(1)  --------->ARR14(2) --------->ATHB12   <---------ANAC58                   <---------TOE2(3) ---->ANAC58      <---------ANAC46                  <---------YAB1 ---->ANAC58  <-------GAMYB                    <----------DOF2 -RAP2.6(3)   <---------ZAT14               <----------DOF2    <<<<<<<<<RAP2.2              <-------- ->HVH21     <-----------RAV1(1)          <---------At4g35610 <---------TOE2(3)        <---------TOE2(3)   gcctcattgatcagactgttgtgcgtattttctactaaaacctctgcttctttgattatcgttttagattgggattacattgaaagattaagttttgtga  10808600                                                          <<<<<<<<<ARR2               <---------At4g35610                    <---------ATHB12              --------->LBD16                        ------>MYB83                <-----------RAV1(2)             <---------HSFB2a(2)                     ------>MYB46(1)    <---------ZAT18      <-------             <-----------RAV1(2)                   <---------MYB59      --------->ZAT14   <----------             --------->HSFB2a(2)                  --------->MYB46(3)   <---------AtMYB61 <-----------GT1          <---------ARR14(2)                     -------->P--------->YAB1      <-----------HVH21       <---------TOE1(3)                 <---------ICU4   <---------ATHB12     <-----------TGA1      <-----------RAV1(2)                --------->YAB1 --------->WOX13(1)    --------->ANAC46 -ANAC46  --------->ARR14(2)--------->HSFB2a(2) --------->MYB52(1) <------NtERF2<---------MYB52(1)   gatgggtttcaggttccaggtgatgttgttctcgatttatcaaacatgactaaccaaacaatcaaactcggcagtggtctccgtcaggtttttaactttc  10808700                             <---------AHL20(2)                        <------ZmHOX2a(2)                <---------ARR14(2)                                                            -------                <---------ARR11(3)                                      --------->AHL20(2)   <-------                <---------ARR11(1)                             <---------YAB1              <--------HAHB4                --------->ARR14(2)                       <---------ANAC46     ------->TEIL <---------ICU4                <-----------ARR10                        <---------ANAC58  <---------YAB1 <---------YAB1 ---DOF2        --------->ARR11(3)                       <---------ANAC58 <---------TOE2(3)--------->ATHB51 -GT1          <---------CCA1(2)                    <---------ANAC46    <---------AHL20(2)--------->ICU4   tcaaaatcacttgttccaaatcttcgatcatttttttggagtttgaaatttgttgtgttgagtgtatgaatgaattaatgaatgttttgctcattattaa  10808800                    =========================HOX2a_HOX2a                        <---------ANAC58                    ------>ZmHOX2a(2)         --------------->AGL15             <---------ANAC58                  <---------AGP1              <---------------AGL15      <-----------RAV1(1)                  <---------ARR14(2)         <-----------------AGL3  <----------DOF2                  <---------ARR11(3)         --------->TOE2(3)       <---------DAG2                  --------->ARR11(3)    <---------KAN4(2)           <---------ANAC58 -->AHL20(2)      --------->ARR14(2)  <------ZmHOX2a(1)             <---------ANAC58             <--- --YAB1          <---------CCA1(2)  <---------TOE2(3)           <---------MYB52(1)  <---------AtLEC2   acaagttatgttgaattttggatcttgcattggcatttgaggaataaacttaatttggaatctacagtttgctttttgttgggcttgcaaggctagaaga  10808900  Previous    Next  AGI:  At2g25355.1    Description:  exonuclease-related. similar to RNA binding [Arabidopsis thaliana] (TAIR:AT4G32175.1); similar to unknown [Populus trichocarpa] (GB:ABK93275.1); contains InterPro domain S1, RNA binding; (InterPro:IPR003029) Range:  from: 10808357    to: 10810801    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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