Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     --------->MYB46(3)                   <---------MYB52(2)           --------->ANAC46  ---------->DOF2           --------->ANAC55(1)                 --------->TOE2(3)           --------->ANAC55(2)               --------->GLK1(2)    --------->TOE2(3)    ---------->DOF2    <---------GLK1(2)  <-------TEIL  <----------ID1          ---------->DOF2                             ---------->DOF2 -------------AtSPL8------->GAMYB  ----------->GT1                       --------->HSFB2a(2) >YAB1     <---------ANAC55(2)   ---------->DOF2                      <----------DOF2               <   caagtacattaacacataacaacaaactaaagaaagaaagaaaaaagaatctcaatctctactacttcacaactttgggaacattttaaagactcttctt  10800500                                 --------->YAB1                              --------->YAB1                                                        <                        <-------GAMYB                                                               -                       ----------->GT1                                                              -                       --------->MYB111(2)                            --------->GLK1(2)             -                       <---------MYB46(3)               --------->TOE2(3)                          <-                 ---------->DOF2<---------YAB1  --------->YAB1        --------->ARR14(2)           <-               <---------HSFB2a(2)             <-------TEIL           <---------ARR14(2)           --           --------->ZAT14<-----------GT1   ------>MYB46(1)          <---------GLK1(2) <------------- ---------AHL20(2) <---------TOE2(3)        ------>MYB83--------->TOE1(3)              ==============   atttcattgtctctgttctcaaaggttgttactcatcataaacaccaaattcataaaacctcaaatttcaagaatctggtctctgtcttctaaactaagt  10800600            --------->YAB1        --------->ATHB12       <---------AHL20(1)       --------->AHL20(1)       --------->AHL20(2)             --------->ARR11(3)       <---------AHL20(2)             --------->AHL20(1)    <---------AHL20(2)                <---------AHL20(1)   --------->AHL20(2) --------->TOE2(3)   <---------AHL20(2) --------------->AGL15  <---------WOX13(1)  <---------------AGL15 ---------ICU4       ----------------->AGL2 -------->YAB1       ----------------->AG ------->HAHB4       ----------------->AGL3 -------->ATHB12--------->TOE2(3)     <---------ARR11(3)                                           <- --------YAB1  <---------ICU4  <------ZmHOX2a(1)                                                  --- --------ATHB12<--------HAHB4  <----------ID1             --------->YAB1                       ------ ------->ICU4 <---------YAB1 <---------TOE2(3)           <---------YAB1  ---------->DOF2       ------ --AGL15<---------AHL20(2)   <---------------AtSPL8 <---------ZAT6 ------->GAMYB ---------->DOF2 <--- ======================================MADS_MADS<---------YAB1  --------->MYB52(1)           <-------   aatgattaatttattgatcattaaccaaaataaggaacaaaatattgagtattagtgttatcatagtaacagactaaaagctcaaaagacttacttccgg  10800700                                                                                         <------NtERF2                                                                                        ------>NtERF2                                                                                       <---------ETT(2)                                                                                      --------->ATERF1(1)                                                                                     <-----------HVH21                                                                                --------->ALFIN1                                                                               <-------MYC3                                                                               -------->ABF1                                                                               ------->MYC4                                                                               ------->PIF5                                                                               <-------MYC4                                                                              >>>>>>>>>>ABI5                                                                              --------->TGA1a                                                                              <---------TGA1a                                                                 ------>ZmHOX2a(1)   <---------ATERF1(1)                                                              <------ZmHOX2a(2)------->MYC3                                                            ------->GAMYB     <---------O2                                                            ============================MYC_MYB                                                         --------->MYB52(1)   >>>>>>>>>>HY5                                                      --------->ANAC46        >>>>>>>>>>AtMYC2                                                      <---------ANAC55(2)     --------->ANAC55(2)       --------->ANAC46                               --------->ANAC55(1)     <---------ANAC55(2)     <---------At4g35610                              --------->ANAC58        --------->O2     --------->At4g35610                              --------->ANAC58        <---------bZIP60(2) -----NtERF2            --------->ALFIN1     <---------ANAC46--------->ARR11(3)<-------PIF5     <---- --->NtERF2            <-----------HVH21     <---------ANAC58--------->ARR14(2)<-------MYC2 --------- --->LBD16         --------->MYB52(1)        <---------ANAC55(1)--------->TOE1(2)   <-----------RAV1(1) >NtERF2         <---------MYB52(2)          <---------ANAC58<---------ARR14(2)------->MYC2 <-------- ------ANAC46  ---------->DOF2   <---------ICU4       --------->ANAC55(2)----------->HVH21 <-------GAMYB --LBD16    --------->AtLEC2------>NtERF2   <-----------------------TaNAC69(2)=====================MYC_MYB   cgtcttcatcagccatacaaagaacggtgaggccatcagtacgttttacgtggaagacgtaacgatcctgagagtatgacacgtggctgtcgccgttacc  10800800                                                                                         ------>MYB83                                                                                       --------->DEAR3(1)                                                                                       --------->AtMYB61                                                                                    --------->RAP2.3(3)                 --------->At4g35610                                               <------NtERF2               ------>ZmHOX2a(2)                                                  <---------ATERF1(1)              <------ZmHOX2a(2)                                                   ------>NtERF2              --------->GLK1(1)                                                  --------->ANAC58              <---------GLK1(1)                                                  --------->ANAC58             <---------AGP1                                                      --------->ANAC46             <-----------ARR10                                                  <-------MYC3             --------->GLK1(2)                                                  ------->MYC3             <---------ARR14(2)                                                 <-------PIF5   ------>ZmHOX2a(2)                                                            <-------MYC2  <------ZmHOX2a(2)                                                  <---------ALFIN1  <---------ALFIN1  --------->HSFB2a(1)                  <---------ANAC46             --------->MYB46(3)<---------MYB52(2)  <---------HSFB2a(1)                  <---------ANAC58           --------->ARR14(2)--------->DEAR3(1) <-----------ARR10                     --------->MYB52(2)       --------->ANAC58------->PIF5<-------- --------->ARR11(3)                    <---------ANAC58      --------->LBD16   --------->ANAC58 <---------ARR14(2)        ------>ZmHOX2a(2)                --------->ANAC58   --------->ANAC58 --------->ARR14(2)       <------ZmHOX2a(2)                 --------->ANAC58   --------->ANAC46 <---------ARR11(3)   <---------HSFB2a(2)                   --------->ANAC46 <---------ALFIN1    ---- --------->ARR14(3)   --------->HSFB2a(2)      --------->ALFIN1 --------->ANAC58------->MYC2--------- -----LBD16  --------->ARR14(2)       <-------TEIL         <---------LBD16 --------->SPL7------>MYB46(1) >DOF5.7(2)  <---------ARR11(3)    <---------ANAC58 <---------ANAC58<---------MYB55(2)--------->MYB46(3) -MYB52(1)   --------->ARR11(3)    <---------ANAC58 <---------ANAC58<---------ABI4(2)------>NtERF2   agggatcttctcaaggatctgcttcgcgatcgtgctagcgttcgtggacgtagtgcttaactccgcaagaaccaccgttccacgcgccaccaacgcgtat  10800900                                                           <---------ATHB12                                                         ------>MYB46(1)  --------->ETT(2)                     --------->REM1(2) ------>MYB83  <---------ETT(2)           ----------->GT1         -------->P -ANAC46                 <---------AHL20(2)         --------->MYB52(1) ----->YAB1             --------->AHL20(2)        <---------MYB52(2) ----------->GT1 -->GT1                 <---------AHL20(2)  --------->GLK1(2) ------->TEIL  ---------->DOF2   aatatcgacatcggaagaaatactaaataaatggttaactgtgaagaatcgaactaaccaaatgaatcagagagataataaagagaattcattttcatat  10801000                                   --------->O2                                   --------->TGA1a                                   <---------TGA1a                                   ===============================================bZIP_DOF                  <----------DOF2  <---------O2                  ===========================bZIP_DOF                                         -------           ----------->HVH21=================bZIP_DOF      <---------O2                  --------->AHL20(2)     <---------ALFIN1       <----------DOF2        --------->ALFIN1                      <---------AHL20(2)   ----------->RAV1(1)  <---------CCA1(2)  <---------AtLEC2--------->O2<----------DOF2  --------->YAB1   gtctgcaacacatatgacctctttctctatctttgccacgagtcttcatggaggtagagccacgaggttgagacttttgttgacatactattaaaatatg  10801100                                                            <---------ICU4                                                            --------->ATHB12                               <------------CBF            <---------YAB1                       <----                             --------->ZAT14               --------->ICU4                     -------                             <---------ZAT14             <---------ICU4          <-----------GT1-----                         <-----------GT1       <---------GLK1(1)     --------->ATHB51        <-------                    <---------ANAC58     --------->ATHB12--------->YAB1     ---------->ID1   --------          <-----------GT1--------->ZAT6 <---------YAB1  <---------YAB1--------->AHL20(1)   --------->YAB1       <---------ICU4 <---------CCA1(2) --------->ICU4--------->YAB1 <---------AHL20(2)    <---------ICU4      --------->ICU4<---------ANAC58   <---------TOE2(3)--------->ICU4<---------AHL20(2)  --------->ICU4 -------->AtSPL8   ---------->ID1----------->GT1   --------->WOX13(1)--------->AHL20(2)   <---------YAB1   tactagtactaatttctatttgtcgtatcactacattgtataatgtttgaaatcagtcatcatgattagaattattttgtttttttcatttcatgatgat  10801200                                         --------->MYB59                                      <---------ARR14(2)                                   ----------------->AGL1                                   ----------------->AG                                 <-----------GT1                          <---------AHL20(1)                          --------->AHL20(1)                                              ------->GAMYB                          --------->ARR11(3)                                            ------>MYB46(1) -----YAB1                <---------ARR11(3)                                            ------>MYB83 -->YAB1                 --------->CCA1(2)<------MYB83                                 ----------->RAV1(1) ---->ICU4              --------->ARR11(3)<------MYB46(1)                              --------->MYB52(1) --YAB1     ---------->DOF2  <---------AHL20(2)        <---------KAN4(2)             --------->MYB46(3) ->ICU4 <----------DOF2 <---------ARR11(3)----------->GT1  <-------TEIL<-----------GT1--------->AtMYB61   gatgagattactttcaaagaactgtagatatatttttgcctatttggtatatagaagaatatacataagaaaattacaaactagtaaaccaacagaagag  10801300           <---------ANAC58                            --------->HSFB2a(2)           <---------ANAC58                            <---------HSFB2a(2)         --------->ARR11(3)                  <---------YAB1         <---------ARR11(3)                --------->YAB1        <---------GLK1(1)                  <---------ICU4        --------->GLK1(1)                 --------->ICU4       <---------ARR11(3)              --------->AHL20(2)   <---------AtLEC2                <----------DOF2    <---------LBD16      --------->ZAT14   --------->YAB1      <-----------GT1 <---------AHL20(2)       ---------->DOF2 --------->AtLEC2   ----------->GT1<---------DAG2<---------ATHB12          <---------ZAT14          <   accatgcatgatatcttgcaagtagtaactatatcgactttttaattatcaataactctggaaactcaaagaaacactgcaaggttttcgaaatgctagc  10801400  Previous    Next  AGI:  At2g25340.1    Description:  ATVAMP712 (Arabidopsis thaliana vesicle-associated membrane protein 712). Identical to Vesicle-associated membrane protein 712 (VAMP712) [Arabidopsis Thaliana] (GB:Q9SIQ9); similar to VAMP7C (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7C) [Arabidopsis thaliana] (TAIR:AT4G32150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44255.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908) Range:  from: 10799743    to: 10800911    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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