Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->ATHB12                                                                         <---        <---------ICU4                                                            ------>ZmHOX2a(2)        --------->YAB1                                                           --------->GLK1(1)        -------->ATHB1                                                           <---------GLK1(1)       --------->ICU4                       --------->ZAT6                       <------ZmHOX2a(2)       <---------ATHB12               ------>ZmHOX2a(2)                         --------->ARR11(3)---  --------->ANAC58                   <------ZmHOX2a(2)                          <---------ARR11(3)<--  --------->ANAC58                  <---------ARR14(2)                  ------>MYB83       <---------YAB1 ------>ANAC58                      --------->ARR14(2)                --------->DEAR3(1)<---------YAB1 ------>ANAC58                     <------ZmHOX2a(1)     ----------->GT1------>MYB46(1) <------------ >LBD16<---------YAB1            <---------TOE1(2)     ---------->DOF2--------->AtMYB61 -------------   aagcaaggaatcattgttaaacaaaaaccccatcttaggatccaaaacactagagtttaaagtgaaatcgcaccatccatgagatctcttcttattagag  10798000                                                                 --------->STY1(2)                                                                 <---------STY1(2)                                                                 --------->At4g35610                                                                 <---------At4g35610                                                             <------MYB46(1)                                  --------->YAB1             <------MYB83 ------GLK1(2)       <---------ARR14(2)                     --------->MYB111(1) ------>GLK1(2)      <---------GLK1(2)                      <---------AtMYB61 ---------ARR10   --------->ANAC55(2)         <---------MYB46(3)--------->MYB111(1)              <--- ---AGL15         <---------ANAC55(2)        <--------P    <--------P            ----------->RAV1(1) -->AGL15        <---------LBD16--------->GLK1(2)<---------YAB1<--------P        <---------ALFIN1----   aatctatgccaagaattcttacggattgtgagagaatcatcgacatggttgatgatagagagttggtagctagcgaaacagtcccacagagatgaactgg  10798100                        <-------TEIL                 ----------->HVH21                ------>ZmHOX2a(2)                                                             ------>ZmHOX2a(1)                =================================HOX2a_HOX2a                              <---------ARR11(1)             --------->YAB1                                                               --------->ARR14(2)         <---------WRKY12<---------At4g35610                                              <---------ARR14(2)         <---------WRKY38(1)                                                             <---------CCA1(2)        --------->WRKY18(1)                                                            --------->YAB1  --------->O2<---------ARR11(3)                                                      <<<<<<<<<ARR1  --------->ANAC46     <--------P                                               --------->ANAC58  <---------O2--------->ARR11(3)                                              --------->CCA1(2) ------TCP20<---------ATHB12              <------ZmHOX2a(1)       <------ZmHOX2a(1)   <<<<<<<<<ARR2-- ----->ARR14(2)--------->At4g35610     <-----------RAV1(2)        --------->YAB1--------->ANAC58 ----   ttccacgagggtcaatgatctgaaggtagatgctgatggagccaggaagagcctgagaatcacctctaggataaaccaagagacgacaatcgtatcctcc  10798200                                      <-------MYC4                                      ------->MYC2                                      <-------MYC2                                      ------->MYC3                                      ------->MYC4                                      <-------MYC3                                     <---------TGA1a                                ==============HOX2a_HOX2a                                     <--------ABF1                                  =================                                     --------->TGA1a  --------->DEAR3(1)            ------>ZmHOX2a(1)                                     =========================MYC_MYB               <---------HSFB2a(2)                                     --------->O2     ------->GAMYB        <---------ZAT14      -----                                     =========================MYC_MYB ------->GAMYB =================                                     <---------ANAC46--------->MYB46(3)    --------->ZAT14      <----                                     <---------ANAC55(2)             --------->ANAC46          <-----                                     =============================MYC_MYB  --------->REM1(2)---------                                     <---------O2    --------->DEAR3(2) <---------ANAC46    <--------         <---------ANAC58     <----------DOF2<---------At4g35610     --------->DEAR3(1)     ---------         <---------ANAC58     =================bZIP_DOF           --------->ANAC46  --------->HSFB2a(2) ------->REM1(1)      <---------ZAT18--------->ANAC55(2)        --------->ANAC46  ----------->RAV1(2) -->ZmHOX2a(1)  <---------ALFIN1----------->HVH21    <------------AtMYB77  <---------ZAT18 <------ZmHOX2a(2)   tacatcgaagtacttgctccacagtgccttagctttgacacgtgtgaagctctcaaccgtccatctacacaacgccgtgtactctcctggacgatcgacg  10798300                                                                                       <---------At4g35610                                                                                       --------->At4g35610                                                                                      <---------MYB46(3)                                                                                    --------->At4g35610                <---------ALFIN1                                                    <---------At4g35610     ------>ZmHOX2a(2)                                                             ------>NtERF2    <------ZmHOX2a(2)                                                             <---------RAP2.6(2)   <---------ARR11(3)                                                             <---------DEAR3(1)   --------->ARR11(3)                                                             <---------RAP2.3(2) ==========HOX2a_HOX2a<----------DOF2                                            <---------At4g35610 ->NtERF2       --------->AtMYB61                                                <---------LBD16 ===========HOX2a_HOX2a                                                          --------->At4g35610 -----ATERF1(1) --------->DEAR3(1)                                              <---------ATERF1(1) ----DEAR3(1) ------->TEIL                    <---------HSFC1(2)                <-----------RAV1(1) >ETT(2)    <---------ZAT18                   --------->HSFC1(2)               <---------DEAR3(1) -ETT(2)    <---------ZAT14            <------ZmHOX2a(1)                    <------MYB83 -->HVH21   --------->ZAT18    <---------HSFB2a(2)    --------->At4g35610   <------MYB46(1)       <--   gctacgatctcttgtgcacctccgctttcatctctagatgaggagagaggcttctccgatgaaatggaggggtgagattggtctgcggctgatgaagaag  10798400                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                    <---------ARR14(2)                    <---------ARR11(3)                    <---------ARR14(3)                    --------->ARR14(3)                    --------->ARR11(3)                    --------->ARR14(2)                    --------->AGP1                   <---------GLK1(1)                  ----------->ARR10              ------>NtERF2             ----------->HVH21           ------>NtERF2                                        --------->ZAT6            <---------TOE1(3)         <---------ANAC58                                     ----------->RAV1(1)         <---------TOE1(2)         <---------ANAC58                           --------->YAB1                        <---------TOE2(2)  ----------->RAV1(1)--------->CCA1(2)            <-----------TBP            <---------AHL20(2)  <--- --------ID1 --------->DEAR3(1)      <-----------RAV1(1)    --------->MYB46(3)            <---------TOE2(3)   acgacaacattgcctccgacgagatctgcttcttcatttctgtggcagttttttttataacatccaacagtactactattttatctagggcttaggttta  10798500                                <---------AHL20(2)                               <---------AHL20(1)                               --------->AHL20(1)                               <---------ARR11(3)                               --------->ARR11(3)                               <---------AHL20(2)                               --------->AHL20(2)                          --------->AHL20(2)                          <---------AHL20(2)                         --------->AHL20(2)                         <---------AHL20(2)                         --------->YAB1                     --------->AHL20(2)                      <---------AHL20(2)                     <---------AHL20(2)                      --------->AHL20(2)                 <----                   --------->YAB1 <---------AHL20(2)       <-----------TBP              ------------>MYB.PH3(2)                   --------->TOE2(3)               --------->DAG2               <---------AHL20(2) ------TOE2(3)------------>CBF--------->AHL20(2)  ---------->DOF2          <---------AHL20(2)<-------   agtttttggttttgacttcaatattaattaaaatatatttttgtttttctgaaaaagggctatttaaaatgttttgttttattttttgaaagtttgttat  10798600                         <-----------GT1                        --------->YAB1                        <---------ICU4                       <---------YAB1                       --------->ICU4                     --------->YAB1                     <---------ICU4                  <---------AHL20(2)                    <---------AHL20(2)              <---------AHL20(1)                    <---------ATHB12                <---------AHL20(2)                            <--                    --------->ICU4                  --------->AHL20(2)       <---------MYB52(1)   <--   --------->ZAT6   <---------ATHB51           ------------>CBF           ---------->ID1     -------- -----YAB1          --------->AHL20(2)     <----------DOF2               <-----------GT1     <------- --YAB1       ------>ZmHOX2a(1)   <------------------------ANAC81      <---------AHL20(2)---------->DOF2   agttaactctcttctcctccaaataattatcaactcttctcttctcttttgcaatttttttttgaacttctattttttcgtttttttgaacaaaagatgt  10798700                                                                                                   --                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                              <------                                                                                              -------                                                                                     <---------ARR11(3)                             --------->YAB1                                          --------->ARR11(3)                             <---------ICU4                                          <-----------ARR10                            --------->ICU4                                          --------->CCA1(1)                            <---------YAB1                                        --------->AHL20(2)      <---------AHL20(2)  --------->YAB1                                   ----------->GT1  ---------    <---------AHL20(2)  --------->AHL20(1)                                --------->ALFIN1 <---------ANAC58 ----MYB46(1)           --------->AHL20(2) <---------AHL20(2)           ----------->GT1    <---------ANAC58 ----MYB83             --------->YAB1     --------->AHL20(2)           --------->DAG2--------->GLK1(2) ->ARR11(3)      ----------->GT1     ----------->GT1                   <---------AtMYB61   <---------ANAC46 --ARR11(3)     --------->DAG2   --------->GLK1(2)                   ---------->DOF2--------->RVE1(1)   tggtatattttttttggtaaggcaaaaataataataatctggtattatatatgaattcaaatagcattttggaaaggtggaaaaaaaaatcttccgtagg  10798800            <---------SPL7          --------->LBD16 ---->ZmHOX2a(2)               --------->KAN4(2) ----ZmHOX2a(2)               <---------GLK1(1) ----->ARR14(2)               --------->CCA1(2) --------ARR10                --------->GLK1(1) ----->ARR11(3)         <---------ANAC46 ------ARR11(3)         --------->ALFIN1     <---------ZAT6 ------ARR14(2)       <---------ANAC46      <---------TOE1(3)      <------ZmHOX2a(2)              --- --ZmHOX2a(1)         --------->ALFIN1      <---------TOE2(3)     --------->ARR11(3)    <---------REM1(1) ---TOE1(2) ----------->HVH21 <----------TaMYB80                  <---------ARR11(3) <---------TOE2(1) -->SPL7 <-----------HVH21   --------->ARR14(2)               ---------->DOF2        <---------TOE1(1) >LBD16  --------->TOE1(2)   <---------ARR14(2)               --------->YAB1------>ZmHOX2a(2)    <---   atcttaataaacgtcggacaggcagtgtgtggatatgcccgatattagggttaatggtttacaataaagatcgagtgatcgtatagtacgatgtagaaca  10798900  Previous    Next  AGI:  At2g25330.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44257.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ65258.1); similar to unknown [Populus trichocarpa] (GB:ABG37643.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974) Range:  from: 10796025    to: 10798410    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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