Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            ------>ZmHOX2a(2)                         <------ZmHOX2a(2)                        <---------ARR11(3)                        --------->ARR11(3)                        <---------ARR14(2)                        --------->ARR14(2)                       <---------HSFB2a(1)       --------->DAG2  --------->HSFB2a(1)      ---------->DOF2  <---------HSFC1(2)                  -------->P                             ---  <---------TOE1(3)    --------->HSFC1(2)                  ------>MYB83            --------->ANAC46  <---------TOE2(3)   ---------->TaMYB80                   ------>MYB46(1)        --------------->AGL15 --------->DOF2       ----------->ARR10                  <---------MYB59          <---------------AGL15 ----->TOE1(3)    <---------HSFB2a(2)            ----------->GT1                  --------->ZAT6<---- ----->TOE2(3)--------->ATHB12                  ----------->GT1                 -------->P    <------ ------------AGL1 --------->HSFB2a(2)          --------->DAG2               --------->ZAT6 ---------- -->ARR14(2) --------->ICU4  ---------->DOF2  ---------->DOF2          <---------ICU4      <---------REM1(1)   cgtaaaggtaaagtaatctttgggaagatcccaaagagagaagaagggaaaagttaaaacctacttggtggaatcttgactctaccagtaatggtgtaac  10785900                                                ------>ZmHOX2a(2)                                               <------ZmHOX2a(2)                                               --------->GLK1(1)                                               <---------GLK1(1)                                    --------->AHL20(2)                                    <---------AHL20(2)                                    <---------AHL20(1)                       --------->ANAC58       --------->ARR11(3)                       --------->ANAC58       <---------ARR14(2)      --------->ARR14(2)      ----------->GT1 <---------ARR11(3)              --------->ANAC58  ------>ZmHOX2a(1)    --------->ANAC46       --------->ARR14(2)              --------->ANAC58 --------->TOE2(3)   ----------->RAV1(1)     <---------CCA1(2)                --------->ANAC46 ------>ARR14(2)     --------->AtMYB61<---------GLK1(2)             <---------ZAT18 -----MYB52(2)    <-----------GT1   --------->AHL20(1)              <---------ZAT14                <- -----GT1        ---------->DOF2   --------->AHL20(2)               --------->ZAT14      --------->YAB1 ->GT1<---------ARR14(2)  ---------->DOF2 <---------LBD16   ---------->DOF2<------NtERF2<---------ATHB12   tatcctcagacctgcacaataaaccacacaaagagaaataaattctcggatctccaaaaaatcaaagtactgaactcggcaagcaactaaatcatcaaat  10786000                                                                                                   <-                             <------ZmHOX2a(1)                                                    ---                            --------->ANAC58                   --------->At4g35610              -----                            --------->ANAC58          <---------At4g35610                    <-------                           <---------TOE2(2)   <---------AHL20(2)         ---------->DOF2    <-------           ----------->RAV1(1)                <---------ARR11(3)      --------->GLK1(1)    <---------AHL20(2) ---------ID1 ------->GAMYB<---------TOE1(2)----------->GT1    <---------At4g35610         <---------   tgagacaaattatcaacagaagaaattcgcaggaaattgcatcgactagataattgagatgatttagcagagaaatcaaagacagagaacgatttactta  10786100                                                                                         --------->TGA2(2)                                                                                        <-----------TGA1                                                                                       <---------bZIP60(1)                                                                                       --------->O2                                                                                       --------->ANAC46                                                                                       <---------O2                                                                                       --------->bZIP60(2)                                                                                       --------->bZIP60(1)                                                                                    ------>ZmHOX2a(2)                                                                                <---------YAB1                                                                            ------>ZmHOX2a(2)                                                                           <---------At4g35610   ---------->DOF2                                                        <---------AGP1<-----------HVH21 --------HSFB2a(2)      ---------->DOF2                ---------->DOF2    --------->ARR14(2) ------------>AGL15  --------->ANAC58   --------->GLK1(2)                 <---------ARR11(3)   <----- --->P               --------->ANAC58   --------->ARR14(2)                <---------ARR14(2)  <------ --ANAC58        --------->ALFIN1       <---------ARR14(2)          =======================HOX2a_HOX2a --ANAC58     --------->DAG2           <---------GLK1(1)            ===============HOX2a_HOX2a<------ --GT1       ---------->DOF2    <---------REM1(1)    <---------YAB1 <------ZmHOX2a(1) <-----------STF1   cccagaagagcaagggaaagtggaagcaaagaagatgaagcaaatctgtaagacgatgaaagcgagagtaggactggatctgatgatcgacgtcatcgtc  10786200                                                                   <------ZmHOX2a(1)        --------->SPL7                                       <------NtERF2        <---------TOE2(2)                                   ------>NtERF2        <---------TOE1(2)                                  <---------DEAR3(1)      <---------SPL7       --------->At4g35610             --------->DEAR3(1)          --------->YAB1    <------NtERF2       <---------ZAT2                     ----------->HVH21          <---------ATHB12   <---------RAP2.6(3)  --------->At4g35610               --------->ATERF1(1)       ------>MYB83   <-----------HVH21    <---------At4g35610              --------->LBD16            ------>MYB46(1)  --------->DEAR3(1)<---------SPL7                       ------>NtERF2          >>>>>>>>>MYB2 ----YAB1          --------->ANAC46                     <---------LBD16     <------ZmHOX2a(1) -----TGA1    --------->ARR14(2)                       <---------LBD16    <---------TOE1(3)      ---- -----HVH21   <---------ARR14(2)                     --------->GLK1(2)    <---------TOE2(3)      <---   atagccgtcgtacgtagatcgacgtaagctgatgaagtctgatattagtcgtcaaattccggcgacgaaggatgttaaggaaaaccaaatcaaaaccttc  10786300                                        <----------DOF2                                     <-----------GT1                            <------MYB46(1)                               --------->AHL20(2)                               <------MYB83                               <---------AHL20(2)                              --------->MYB59                               <---------AHL20(1)                        <---------------AGL15                          <---------AHL20(2)       --------->LBD16       --------------->AGL15                          <---------AHL20(1)     <---------LBD16        ----------------->AGL1                          --------->AHL20(1)     --------------->AGL15  --------->ZAT6              <                          --------->AHL20(2)     ========================================MADS_MADS --     *TSS <---------------AtSPL8<XXXXXXXXXXXXXXXXXXXXMIR1886.1 <---------MYB52(1)                  <-  --------->MYB52(1)     <---------AHL20(2)    <---------At5g28300      <-----------------AGL1     <- ----->HSFB2a(2)         --------->AHL20(2)   <-----------GT1 <---------At4g35610                ---- ------HSFB2a(2)     <---------AHL20(2) <---------DAG2---------->DOF2 <-----------GT1          <-----   tggataactgagaaggtactggtttaattttattttattttactttttttaccctgaaaagttcagttaacttaaccctatttggtcgatgttctaaacc  10786400            <---------ANAC58  <---------AHL20(2) ---------RVE1(1)          --------->ARR14(2) ------->ARR14(2)          --------->GLK1(2) --------ARR14(2)       --------->LBD16               <---------MYB52(1) --------GLK1(2)      <---------LBD16               <---------ANAC46 ----->LBD16<---------ANAC58                        <---------ANAC58 ----LBD16<-----------GT1 <---------GLK1(2)         <---------ANAC58 <------ZmHOX2a(2)             <-   ggattttttttttttcgtctctaaaccggaatctacaattctatatacttagtttcgtttgctaaaatgcgatccaatttgcacttagacagtctacatt  10786500                                  <---------AHL20(2)                            <---------ANAC55(1) --------->ANAC58           <---------ANAC46                         <---------AHL20(2) --------->ANAC46       --------->YAB1                       <---------ANAC46 --------->ANAC58    <---------------AGL15                  --------->DAG2            ----------->GT1 ----------GT1       --------------->AGL15                 ---------->DOF2       <---------AHL20(2)   ttcaccccaaaattgttgttgttctatattaagtgtataattttcatacctgtgtaatttgtaaagtgtattttcttacatgtataatttgtaaaatgtg  10786600                          --------->ARR11(3)                          <---------ARR11(3)                         --------->YAB1                        <---------TOE2(3)                        <---------YAB1                            --------->ANAC46                  <         <---------------AtSPL8                              <---------AHL20(2)                     -         --------------->AtSPL8                             --------->AHL20(2)                    ---   ttttttttttatatgtacaaacacttaagataattcatatcgaaattacacaaatatttgaattttatacccaaactcacatttagaacataatttagaa  10786700          ------->TEIL       <---------YAB1      <---------TOE2(3)    <---------AHL20(2)                                                            <---------ICU4    --------->AHL20(2)                                                         --------->REM1(1)   <---------YAB1            ----------->GT1                              --------->ANAC58 --------->ATHB51       ------>MYB46(1)                                   --------->ANAC58 <---------ICU4         ------>MYB83                --------->MYB46(3)    --------->ANAC46 <--------HAHB4       ------->GAMYB          <---------At4g35610   <---------ANAC46               --- ---------YAB1     --------->WOX13(1)        --------->At4g35610   <---------ANAC58       <-------TEIL -------->ICU4    <---------WRKY38(1)<---------AHL20(2)            <---------ANAC58      --------->CCA1(2) ------>YAB1     --------->WRKY18(1)--------->AHL20(2)     --------->MYB52(1)----------->RAV1(1)  <--   tcataattaatgaatgttagtcaaccaaatacagtttataaaatttcagctctaacaaacaaaacgatgtcgttttaagcaacatcatgagatacatgtt  10786800  Previous    Next  AGI:  At2g25310.1    Description:  carbohydrate binding. similar to carbohydrate binding [Arabidopsis thaliana] (TAIR:AT4G32130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44334.1); contains InterPro domain Carbohydrate-binding-like fold; (InterPro:IPR013784) Range:  from: 10784180    to: 10786305    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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