Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------ALFIN1                                            <---------ANAC58                                            <---------ANAC58                          --------->ANAC58                                           --------------->AtSPL8                     --------->ANAC58                                           <---------------AtSPL8                 --------->YAB1                  <---------ICU4       --------->ATHB12                        ------>MYB46(1)                  --------->YAB1      <---------AHL20(2)                       ------>MYB83          <---------ALFIN1            <---------YAB1                         --------->TOE2(3) ----->DOF2      <---------YAB1    --------->AHL20(1)           ------->TEIL <---------MYB59   aagaaatggcccaaacctgatcataactcttcttaagtatattattgagtaccactctattctctgcatcttgccataacctaatcacaagaaaaatgtt  10781000                                                                                                   <-                                                                                                   --                                                                          ----------->GT1        ----                                                            <-------TEIL ----------->GT1         ----            <---------GLK1(2)                              --------->ARR14(1)                    <---       ------>NtERF2                                       --------->CCA1(2)                    -----       ----------->RAV1(1)                                 --------->GLK1(2)                   <-----   --------->ANAC58                                       --------->ARR11(1)                  -------   --------->ANAC58                                       --------->ARR14(2)           ---------->DOF2   --------->ANAC46                                       <---------ARR14(2)        --------->ANAC58 --------->YAB1                                          <---------GLK1(1)<----------ID1      <------ <---------ICU4                                   --------->ATHB12 <---------YAB1   --------->ANAC58-   caattacgacaccagaatatttgaaaatcgaattctaagaactaatctagagtcattggagattcgattatcaatggggaaaaacgaagcaaaggtacct  10781100        ---------->DOF2     <---------ANAC46  ----------->HVH21  --------->DEAR3(1) <------NtERF2 --------ATERF1(2) ------->ATERF1(2)                           ------->GAMYB -->MYB83           --------->ANAC46      <-----------GT1 -->MYB46(1)        --------->ANAC58   --------->YAB1 --------HVH21      --------->ANAC58   <---------ICU4 ---->ANAC46     ----------->HVH21    <---------YAB1 ----MYB111(1)  --------->DEAR3(2)    --------->ICU4                                      ---------->ID1 -->At4g35610  --------->ANAC46  --------->ANAC58           --------->GLK1(1)        --------->ZAT2 ---At4g35610  --------->ANAC58  --------->ANAC58           <---------GLK1(1)        <---------ZAT2 ----->NtERF2  --------->ANAC58---------->DOF2            <------ZmHOX2a(1)    <------ZmHOX2a(1)<----   gccagcgacgtagagccaagcgacgcaagagaagaaagccattataaccgaaggcttagaggaactctgagaaaacttggaggaacgagctcgtcgttct  10781200                       --------->At4g35610                       <---------At4g35610                    <--------P                 <---------TOE1(2)                <---------ANAC46              <---------ANAC46              ===============MYC_MYB              --------->O2              <---------TGA1a              <---------O2              --------->TGA1a            <-----------HVH21           --------->DEAR3(1)          --------->DEAR3(2)          <---------HSFC1(2)          <------------AtMYB77          <---------HSFB2a(1)          --------->HSFB2a(1)                 --------->CCA1(2)          --------->HSFC1(2)             --------->ANAC46                  <---------ARR11(3)          --------->MYB46(3)         <<<<<<<<<GATA-2                       --------->GLK1(2)        --------->ARR14(2)           <<<<<<<<<GATA-3                       --------->ARR14(2)        <---------ARR14(2)           <<<<<<<<<GATA-4                  <-------TEIL -----YAB1==============MYC_MYB      <<<<<<<<<GATA-1                 --------->CCA1(2)              -   gatttggagggaaccgtcgtgggtaagctctccatctcaatccacgagatagaagagtgagagaagagaagattcaaaatctgagggcaaaaactggaag  10781300                                                                                   ----------->GT1                                                                                   <---------MYB46(3)                                                                                  ------>ZmHOX2a(2)                                                                                 <------ZmHOX2a(2)                                                                                <---------ARR14(2)                                                                         *TSS--------->LBD16                                                     --------->ARR14(2) <---------ANAC58                                              <<<<<<<<<TBF1             <---------ANAC58                                           <<<<<<<<<TBF1            <---------GLK1(1)                                 --------------->AtSPL3            --------->ARR14(2)   <---------YAB1               <------ZmHOX2a(1) <---------------AtSPL3            <---------ARR14(2)<---------MYB52(1) -------->GLK1(2)                --------------->AtSPL8      <-----------RAV1(1)--------->ARR14(2)  <   agaatcgaaatgaagaaggagcatttgactctgtatttgtacttcttcttcttcggtttctctgtgttggatttgcttccgagatcggttactatggcca  10781400                                                           --------->ARR11(3)                                        ------------>CBF   <---------ARR11(3)                               <---------AHL20(2)         --------->RVE1(1)         <---------MYB46(3)                               --------->AHL20(2)     <---------AHL20(2)           <---------TOE1(2)           <---------YAB1     <---------AHL20(2)      --------->AHL20(2)           <---------TOE2(2) -------TEIL--------->YAB1    --------->AHL20(2)---------->ID1         ---------->DOF2<--------P  <--   agttcataaactgatcatagacatagggggaatttaatttctgccaatttgttttttttaatatctctatctataaagagactcgctggttagaccagag  10781500                                                 --------->MYB52(1)                                            <------MYB83                                            <------MYB46(1)                     --------->YAB1                                        <------MYB46(1)           >>>>>>>>>>WRKY11                                        <------MYB83              >>>>>>>>>>WRKY6                                    <---------STY1(2)            --------->WRKY45  <---------ICU4                                    --------->STY1(2)            --------->WRKY38(1)       <---------AtMYB61            --------->ZAT2        <----------DOF2      <---------YAB1  <------MYB46(1)                   <---------ZAT2       --------->TOE2(3)    <---------AHL20(2)  <------MYB83                     --------->ANAC46--------->ANAC58    --------->ANAC58 <---------AtMYB61                 --------->ANAC58--------->ANAC46    --------->ANAC58 --------->MYB59                   --------->ANAC58--------->ANAC58    --------->ANAC46       <------ -----GAMYB                ---------->DOF2<--------P     --------->TOE1(3)    --------->AHL20(2)   ggttaggttttggtctggttgtaatactgtatagcccaagctaggttggccaaacgaaacctttaagttgactaagccattttaataagtatggatttta  10781600                                                                                            <--------                                                                                       <---------YAB1                                                                                     --------->ATHB51                                                                                     <---------ICU4                                                                                     -------->HAHB4                                                                                     <---------AHL20(2)                                                                                     -------->ATHB1                                                                                     --------->YAB1                                                                                     <--------HAHB4                                                                    <---------YAB1  --------->ICU4                                                              <-------TEIL          <---------YAB1                                  <---------YAB1              --------->SPL7        <---------ATHB51                                --------->YAB1             ------->GAMYB          <--------HAHB4                               <---------YAB1        --------->TOE2(3)            <---------ICU4                        --------->ARR11(3)----------->GT1 --------------->AtSPL3  --------->YAB1                        --------->GLK1(2) <----------ID1--------->MYB52(1)       --------->AHL20(2)                     --------->AHL20(2)  <---------TOE2(3)--------------->AtSPL8 --------->ICU4 ---AHL20(2)         <---------AHL20(2)---------->DOF2  <-----------GT1        --------->YAB1   tgtatggtcttcccattgaaaaataaaatctgtattatagttaaaggaaaaaaaaacttaaccgtacattatgaagagcatgaataattattatttcatt  10781700                                          --------->ANAC46                                     <-----                                         <---------LBD16                         --------->ZAT18                                         ------>ZmHOX2a(1)                    --------->At4g35610                         <---------ARR11(3)                                   <---------At4g35610 --------->ANAC46        --------->ARR11(3)                                 --------->DAG2     <----- -AHL20(2)       <---------REM1(1)<------ZmHOX2a(1)      --------->MYB46(3)---------->DOF2     ------   tacccacaacaacaacgtaatgtagaagttcttggaggaagtcctcggaatagaatgcaaacaccatgtttataagataaagctgcacaatatttagagc  10781800                                                         --------->ANAC46                                                         --------->ANAC58                                                         --------->ANAC58                                                        --------->ZAT18                                                    <---------------AtSPL3                                                    --------------->AtSPL8                     ------                                --------->ZAT18     <---------------AtSPL8             ---------->DOF2                                <---------ZAT18    <---------ANAC58                  <---------YAB1      <-------TEIL    --------->ZAT14              <---------ANAC58                <---------ICU4  <---------YAB1  --------->HSFB2a(2)          ---------->DOF2                     --------->YAB1 ----ZAT18        <---------HSFB2a(2)      <---------TOE1(2)                      --------->ICU4 ----ZAT14   XXXXXXXXXXXXXXXXXXXXX>MIR167D <---------TOE2(2)                      <---------ATHB12 --->ZAT14  ------->TEIL --------->GLK1(2)<------NtERF2 <---------ZAT18         --------->WOX13(1)   agtcttgattcatgaatcttccagtacaatctggtccacaagtcggaggtaaagcttgtacgctaattcccatttcaactatcaatcatgaaagaaaaaa  10781900  Previous    Next  AGI:  At2g25300.1    Description:  transferase, transferring glycosyl groups / transferase, transferring hexosyl groups. similar to galactosyltransferase family protein [Arabidopsis thaliana] (TAIR:AT4G32120.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78789.1); contains InterPro domain Glycosyl transferase, family 31; (InterPro:IPR002659) Range:  from: 10778773    to: 10781373    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g25305.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G54215.1); contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 10781700    to: 10782055    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version