Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ----------->GT1                       --------->TOE1(3)                                <---------TOE2(3)                ----------------->AGL1                                 --------->YAB1           <---------bZIP60(2)                                      --------->TOE2(3) <---------YAB1           <---------ANAC55(1)                               <---------At4g35610     <-----------GT1           <---------ANAC58                                  --------->At4g35610   <---------AHL20(2)           <---------ANAC55(2)                           --------->ARR14(2)    <---------AHL20(2)           <---------ANAC46                              <-----------ARR10    <---------YAB1           <---------ANAC58                              <---------ARR14(2)  <---------AHL20(2)           --------->ANAC55(2)                           --------->GLK1(2)<---------AHL20(1)      <------ZmHOX2a(1)--------->TOE2(3)                <---------GLK1(2) --------->AHL20(1)      <--  ---------->DOF2 ------>ZmHOX2a(1)                  <------ZmHOX2a(1) --------->AHL20(2)      <-----   acataaaaggattacgtgtcctaaacctgaaaaaaaacacataaatgtctatataggagaatctgctgtacattaatatttttattttatccttgttttt  10766400                                                             ----------->GT1                                                           ---------->DOF2                                                       --------------->AGL15                                                       --------->TOE2(3)                                                       <---------------AGL15                                                       --------->TOE1(3)                                                       <---------MYB59                           <---------ARR14(2)         <---------ANAC55(2)                           ------->TEIL               ----------------->AGL1                  -------                           --------->ARR14(2)         ----------------->AG             --------->LBD16                          <---------CCA1(2)         <-----------GT1                    --------->At5g28300                      <---------ANAC46           <--------HAHB4                       --------->TOE2(3)                      <---------ANAC58           <---------ICU4     <---------ICU4    ----------->GT1        <---------YAB1<---------ANAC58           --------->YAB1     --------->YAB1    <---------ANAC46 --------DOF2      <----------DOF2              <---------YAB1 --------->AHL20(2)    <--------------- ------GT1    ---------->ID1                  --------->YAB1--------->DAG2    --------->TOE2(3)   ---   cttttcaattttgtttgtcttctttcttgtatctgttccattgcataactataattacctaaaaagttaataataacatatgttaataccgtaaaacatt  10766500        <---------AHL20(2)        <---------ICU4                                     --------->ZAT14        --------->YAB1                                     --------->ZAT18        --------->ATHB51                                   <---------ZAT14        --------->AHL20(2)                               --------------->AtSPL3        <--------HAHB4                                   --------------->AtSPL8        -------->ATHB1                                   --------->ZAT6                         -----       --------->ICU4                                 <---------YAB1                        <--------       <---------ATHB12                             <---------ICU4                 --------->YAB1<---       <---------ATHB51                             --------->YAB1      <---------TOE2(3)   --------- -->TOE2(3) <---------AHL20(2)                 ------>ZmHOX2a(1)        <---------TOE1(3)   <-------- --------TaNAC69(2)   ----------->GT1         --------->TOE2(3)        ---------->DOF2--------->YAB1- ------->DOF2  <----------DOF2      ----------->GT1<---------ATHB12   <---------AHL20(2)    ---------   aaaagttcaattattttctttgtgtgattaaaacaaacatgtaaatttcctaaatcataactgtactaatatttaaagtttagaacaataacaattaatt  10766600       --------->At5g28300      ----------->GT1    <---------LBD16   <---------O2                            <--------ATHB1   --------->ANAC46                        <---------ICU4                                   --------- ---->AHL20(2)                             --------->ATHB51                               <---------YAB1 -AHL20(2)                                <---------ATHB12                           <---------CCA1(2) --------GT1                              <---------ATHB51                       <---------ANAC46 >AHL20(2)  ----------->GT1   >>>>>>>>>>>>>>>>>LFY                               <---------ANAC58 -AHL20(1) --------->DAG2    --------->GLK1(2)                                   <---------ANAC58 ---------->HVH21--------->GLK1(1)        --------->ICU4                       <---------ANAC46 >AHL20(1)---------->DOF2  --------->HSFB2a(1)     --------->ZAT14    --------->GLK1(2) --------->YAB1   aactcacgcggtaaaagtgaaatctacaaagattccattgtccaataattcacttcagaaattgtaagagaaaacctggttttgtgtgtatcatcaaagt  10766700                                                  --------->HSFB2a(2)                                                  <---------HSFB2a(2)                                     <-----------HVH21                                <-----------RAV1(1)                             <----------DOF2<---------GLK1(2)                    ------>ZmHOX2a(1)  -                        --------->DAG2      --------->ARR11(3)                ------>ZmHOX2a(1)   <--    <---------ICU4     ---------->DOF2      <---------ARR11(3)    <---------TOE2(3)              ---- ->DOF2           ----------->GT1    <---------PCF2  ---------->DOF2   <------------CBF          <---   ctaaactcattacagaaaaactgcaaaaagtcttttgtgggtcatagattttctaaaaagacacatttaagtttattgtcctccttctctctctctctct  10766800                                 <-----------HVH21                                 <-----------TGA1                                <---------bZIP60(1)                                --------->ANAC55(2)                                   <-----------GT1                                <---------ANAC55(2)                                 <----------DOF2                                <---------ANAC58                                <---------ANAC46                                <---------ANAC58                                <---------ANAC58   *TSS  <----------DOF2  <---------YAB1                                     <---------MYB52(1) -------->ANAC46      --------->ANAC58                                      <-------GAMYB -------ALFIN1        --------->ANAC58 <---------ZAT14                     <-----------RAV1(1)<------ ----->ZAT14          --------->ANAC46 --------->ZAT14           <<<<<<<<<TBF1  <---------ANAC58 ------ZAT14     <----------DOF2--------->bZIP60(1)              <------------------------ANAC81   ccactgcaactctttctcactttcactcaagattgcgtcactgtagtagtagtagtaatgtctcttcttcttctcttctgttgcttctttacctctcttt  10766900                                                                 --------->ARR14(2) <---------ANAC58                                                       <---------TOE2(2)       <-------TEIL                                                       <---------TOE1(2)   <---------TOE2(2)                                                      <-----------RAV1(2)  <---------TOE2(3)                                                     --------->LBD16       <---------TOE1(2)                                                    --------->ANAC46     <---------MYB52(1)                                                   <---------LBD16   ------>ZmHOX2a(1)                 --------->At4g35610          <---------At4g35610<---------ARR14(2) <---------ANAC58                 <---------At4g35610    ------>ZmHOX2a(1)    <XXXXXXXXXXXXXXXXXXXXXMIR2936     <----- ----DOF2 <---------YAB1     <-----------GT1  --------->At4g35610<-----------GT1 <----------DOF2   ctatttctcattctcatggagcttccactattcacatttctcctactcagcctcccgcaggtttgtgtttcctctcttaggttctttcttgataaaactt  10767000                           <---------ARR11(3)                           --------->ARR11(3)                           --------->GLK1(2)                          --------->RVE1(1)                 ----------->GT1                 <----------ID1               ---------->DOF2           <---------------AGL15           --------------->AGL15          ----------------->AGL1                                    --------->AtLEC2          ----------------->AG                                    <---------AtLEC2        <-----------GT1   --------->CCA1(1)               <---------ANAC58                   <-------   <----------DOF2      --------->AHL20(2)                <---------ANAC46        --------->DAG2 <--- -----DOF2<---------------AGL15                           <---------ANAC58       ---------->DOF2 <---   tctctcttttttaccaaaaaagaaaaaaaaatctttctctcttcttctacattctctgtttcttgtttccatgaaaatgctcaaaaagttcaaaactttg  10767100                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)            --------->ARR14(2)                                           <<<<<<<ZML2            --------->ARR11(3)                                        <---------HSFB2a(2)            <---------GLK1(2)                                         --------->HSFC1(1)            <---------ARR11(3)                                        <---------HSFC1(1)     <----------DOF2                  <--------P                      --------->HSFB2a(2) ---DOF2    <---------ARR14(2)       <-------GAMYB               <---------HSFC1(2) ------ANAC58                       <---------MYB46(3)   <XXXXXXXXXXXXXXXXXXXXMIR780.1 ------ANAC58              <<<<<<<<<<<<<<<<<LFY--------->GLK1(2) --------->HSFC1(2)   cttaattctttacagattttcgactaatttcacaatgggggttgtctataatctgaattttctcagtagcttctagaacttgatgactcttgaacatcat  10767200                                                                  <---------ANAC58                                                                  <---------ANAC46                <--                                                         <---------AHL20(2)                <---------                                  --------->DAG2        <---------AHL20(1)             ---------->ID1                                 ---------->DOF2        --------->AHL20(2)      <---------YAB1   <---                        --------->MYB52(1)              <---------AHL20(2)  --------->WOX13(1)   ----                    <---------TOE2(3)        <----------DOF2      <---------ANAC58     <---------CCA1(2)   ctatatgcaatttctagggtttgagataacagaaaaaaagtttcagtctttactacaatttttttgtttcttgaatttcaatctgattcgtctcttttca  10767300  Previous    Next  AGI:  At2g25270.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G12400.1); similar to Os02g0799300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048408.1); similar to hypothetical protein OsJ_008445 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24962.1) Range:  from: 10766803    to: 10769647    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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