Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->YAB1                                     --------->YAB1             <----------DOF2       <---------YAB1            <---------ANAC58     --------->ATHB12        --------->YAB1            <---------ANAC46    --------->ICU4          --------->ICU4            <---------ANAC58    <---------YAB1          <---------YAB1              <---------AHL20(2)     <---------MYB59         <-------TEIL             <---------ICU4                --------->AHL20(2)   ------->TEIL   --------->ANAC46 <---------WOX13(1) --------->YAB1             --------->TOE2(3) --------------AtSPL8   --------->AHL20(2)          --------->ARR11(3)   <---------ANAC46   gtaagtacctagttgctttcacacaaaaatatacatgattaataataaacaaaaaatcatgataatgcaattgttgtttataacatttatatatacacac  10755100                                     --------->YAB1                        <---------AHL20(1)                        --------->AHL20(2)                       --------->AHL20(2)                           --------->TOE2(3)            <---------ARR11(3) --------->YAB1                       --------->TOE1(3)            --------->ARR11(3)<---------YAB1               ---------->DOF2              ----------->GT1           --------->YAB1  --------->ICU4             ---------->DOF2          <------ZmHOX2a(1)          --------->ICU4<---------AHL20(2)        --------->At4g35610        --------->MYB59    <----          <---------YAB1--------->AHL20(1)        <---------At4g35610   <---------TOE2(3)    <-------   atataagttgtgatgatcatctatattaaattatgaaaataagaatgtagggagatgaaagaaaagaacaccttaatgttaggacgagcatggttatacc  10755200                                                                                     <----------DOF2                                                                                <---------ARR11(3)       --------->ZAT14                             ---------->ID1             --------->ICU4        <       <---------ZAT14                         <----------DOF2           --------->ANAC46       <---- -----ALFIN1                            <-----------GT1                 --------->MYB46(3)      ----- ----GT1           ------>ZmHOX2a(1)<---------AHL20(2) <---------MYB52(1)------->GAMYB       <-------   acctctctctgcattgttttcctgttcttccttcgaatttttttgcgacctttgtccatttgtttttgggtccaagcgccattatctctttcaattttct  10755300             --------->AHL20(1)                               --------->YAB1             --------->ARR11(3)                               <---------AHL20(2)             <---------ARR11(3)                               --------->AHL20(2)             <---------AHL20(1)                              <---------YAB1                  --------           <---------ARR11(3)                              --------->YAB1                    --------           <---------AHL20(1)                              <---------ICU4                   <--------     <-----------GT1                   ---------->DOF2    <---------ATHB51                --------->YAB1 <---------AHL20(1)               --------->AHL20(2)      --------->ICU4                 <---------AHL20(2) --------->AHL20(1)              --------->AHL20(2)       --------->AHL20(2)             <---------YAB1 ---------AHL20(2)       ------>ZmHOX2a(1)                <---------AHL20(2)            --------->AHL20(2) -----------AGL15       --------->TOE2(3)               --------->YAB1 <---------GLK1(1)--------->AHL20(1) ---------->AGL15 <-----------GT1<---------AHL20(2) --------->YAB1     --------->GLK1(1)<---------AHL20(1) ----GT1   --------->AHL20(1)--------->AHL20(2)     --------->AHL20(2)<---------ICU4   --------->YAB1   atatatattacaaaatattttcacatcctcaaaaaataaataaaaggtttacaataaaaaataattatataagaattcccaaggatgaaatataataata  10755400                                                             --------->ZAT14                                                             <---------ZAT14                                                  --------->GLK1(2)            <---------DAG2                                                 --------->ARR14(2)            <----------DOF2   <---------TOE2(3)                             <---------GLK1(2)          <-----------GT1 ->YAB1               --------->AHL20(2)         <---------ARR14(2)       <-----------HVH21     <---- >HAHB4          ----------->GT1               ----------->ARR10         --------->bZIP60(1)    <---- -YAB1      --------->YAB1                   ------>ZmHOX2a(1)   <----------DOF2                <----   gttttaagttttaatgagaatgaaaaaaatatgaagacttacatgtcctcagattctgtccagtttactttgtcgatgtcacttttcttcaaatatttgc  10755500                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                             <-------GAMYB                                                                             <---------ANAC58                                                                            <---------MYB46(3)                                                                            <------MYB83                                                                            <------MYB46(1)                                                                            --------->MYB55(2)                                                                            --------->MYB52(2)                                                                           <---------AtMYB61                                                                           <---------TOE1(2)           <----------DOF2                                                <---------MYB52(1)          --------->TOE2(3)                                             <---------ANAC58       <---------ALFIN1                                            --------->ATHB12      --------->MYB46(3)          <---------AHL20(2)               <---------ICU4 <---------ZAT18                 --------->AHL20(2)               --------->ICU4 <---------At4g35610             <---------AHL20(1)             --------->YAB1             <---------AHL20(1) --------->At4g35610             <---------AHL20(2)        <---------YAB1<-------GAMYB     <---------ARR11(3) -----ANAC46               --------->YAB1          <---------ICU4 <---------YAB1 <---------ANAC46 -----ANAC58              <---------YAB1        --------->YAB1 <-------TEIL<---------TOE2(2) -----ANAC58           <----------DOF2<-----------GT1    <----------DOF2<---------ANAC58   --------->ARR11(3)   ttgtgctcaccacctttatattcttcttttgataattttttttcatcttatcatcttcactttgattcatgatttcgttggttgtgtttttgatatattc  10755600                         <-------TEIL                     <---------TOE2(3)                     <---------TOE1(3)                  <---------WOX13(1)                 <------------CBF                --------->ATHB12                                       --------->At4g35610                -------->HAHB4                                         <---------At4g35610               --------->ICU4                              --------------->AGL15               <---------YAB1                             ----------------->AGL2               <---------ATHB12    ----------->RAV1(2)  <---------ARR14(2)           ------------>CBF            <---------AHL20(2)     --------->ANAC55(2)  --------->ARR14(2)    <------------CBF      -           --------->AHL20(2)      <---------ANAC55(2) <---------CCA1(2)     --------->ATHB12 <------   tggcactggcacattaaatgattgaggttcacccattacctgatcaagagttggctcatatcccttattagacagctcttcattgtatacaatctcatct  10755700                      --------->AHL20(2)                         <-------GAMYB                   --------->YAB1                               ----------->GT1             --------->LBD16                                 <---------ANAC46            --------->LBD16<---------AHL20(2)              --------->ALFIN1            --------->ANAC58                      --------->ANAC58       <---------ATHB12            --------->ANAC58             <----------DOF2  --------->ALFIN1--------->YAB1   <---------MYB46(3)            --------->ANAC46         <-----------GT1   --------->DAG2  --------->WOX13(1) <---------MYB52(1)           <---------LBD16<---------AHL20(2)      --------->ANAC58   ------------>CBF    <-------GAMYB --------->DOF2   <---------ATHB12  --------->KAN4(2) ---------->DOF2<---------YAB1    <------------- ---CCA1(2)--------->LBD16--------->AHL20(2) <---------TOE2(3)<---------ANAC46       <-----------GT1   cttaaagtatttccccgcaaatcataaatttttttgaatatacctttagggtatgcaaaagttggggggttatcaatcatatggatttttccgttgttgg  10755800                        --------->GLK1(1)             <---------YAB1                       <---------ARR11(3)           <---------ICU4             <---------WOX13(1)           <---------ARR14(2)                 <---------AHL20(2)       --------->YAB1  --------->ARR11(3) --------->ARR14(2)   --------->MYB111(1)    <------ZmHOX2a(1) ----AGL1   <------------CBF             <------ZmHOX2a(1)    <--------P    --------->AHL20(2)   ctatgctattcatagattgctcagagatatcaacatttgagtaggatttgatactcattaatgggtagtttgatggaattttatatgaggaagagttgta  10755900                                                                                            <--------                                                                                            ---------                                                                                  <---------YAB1                                                                                  --------->ICU4 <---                                                                                <---------At4g35610 -                                                                          <---------MYB46(3)---------                                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                  <---------ARR11(3)       xxxxxxxxxx                                                                  <---------GLK1(2)--------->ATHB12 x                                         ----------->GT1          --------->ARR11(3)       <xxxxxxxxx           --------->ATHB12            --------->GLK1(2)    --------->CCA1(2)  <---------ZAT6   -----          <---------YAB1    <---------YAB1            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------ARR11(3)  ------>MYB46(1)        --------->GLK1(2)           <------ZmHOX2a(2)   <---------AtMYB61 --------->ARR11(3)  ------>MYB83          <---------GLK1(2)--------->YAB1---------->DOF2<---------AtMYB61    xxxxxxxxxx   aaccaaatggttttgattagtatccaaattctgattttgagaatcgtaatttgggatcaaaggtataagattttggtggtagtgctgattagagatatca  10756000  Previous    Next  AGI:  At2g25230.1    Description:  MYB100 (myb domain protein 100); DNA binding / transcription factor. similar to MYB22 (myb domain protein 22), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G40430.1); similar to hypothetical protein OsI_021032 [Oryza sativa (indica cultivar-group)] (GB:EAY99799.1); similar to MYB transcription factor-like [Oryza sativa (japonica cultivar-group)] (GB:BAD67643.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR00 Range:  from: 10754290    to: 10755546    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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