Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->ZAT14    <---------ANAC46               --------->ARR14(2)                   --------->AHL20(2) -------->DOF2                    <---------MYB52(1)                    <---------AHL20(2) -------WRKY12                   --------->LBD16            <-----------GT1    --------->ZAT6 -------HVH21          --------->ANAC46                     --------->ZAT6   --------->MYB52(1) --->O2                --------->ANAC58                  --------->YAB1--------->AHL20(2) --->bZIP60(2)         --------->ANAC58      <---------YAB1<---------YAB1    <-----------GT1 -->LBD16   --------->ANAC58    --------->ANAC46  <-----------GT1   --------->TOE1(3) ->DEAR3(1) --------->ANAC58   <---------LBD16  <---------WOX13(1)  --------->TOE2(3)     --------->ZAT18   tcaaaggcgttgataagcccttcccatgccatctccgtaaactcattttgattaacctattatcactaaaccataaaattaacagttccaagttcacaat  10708800                                    <---------AtMYB61                                    --------->ALFIN1     <------NtERF2                                <---------At4g35610     --------->LBD16               <<<<<<<<<<GATA-1 --------->At4g35610    <---------ANAC46        --------->ZAT6          --------->ZAT2         <------NtERF2         --------->WRKY38(1)     ------->GAMYB              <---------ZAT2        <---------LBD16        ----------->HVH21    <---------MYB111(1)    ----------->RAV1(2)       <---------ANAC46        --------->WRKY12    --------->MYB46(3)    ------->TEIL             <-----------HVH21         --------->WRKY45    <---------MYB46(2) --------->ANAC58        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <---------MYB52(2) --------->ANAC58       ---------->DOF2  ---------->DOF2<---------WRKY18(1)  --   tgagcaactaacactgaaatcgagcacgaacctgagctgtggtagtacaaaagcgtcgcggagaagaaagagggaagagttgaccatgagtagtagtcgc  10708900                                                            <---------ZAT14                                                           --------->ALFIN1                                               ------>NtERF2--------->ZAT14                                               <---------ATERF1(1)                                              --------->RAP2.6(2)                                              <---------RAP2.6(2)                                              <---------DEAR3(1)                                              <---------ATERF1(2)                                             --------->ATERF1(1)                                       <-----------RAV1(1) <---------REM1(1)              --------->ATHB12      ------->TEIL<------NtERF2  <---------ZAT6           --------->At4g35610--------->DEAR3(1)         <------ZmHOX2a(1)      <---- ------->ATHB12            <---------At4g35610--------->ATERF1(2)   <------ZmHOX2a(1)    --------->MYB52(1)   atgagtgatagaagagttattgatttttccgatgaatgaatttgttggccggccaatagaggtgtagtgaggagaggaagagagagagcgagaacggagg  10709000                                                     <---------YAB1                                                   <----------DOF2       <---------TGA1a                                                   ================================bZIP_DOF                                         --------->ANAC58                --------->TGA1a                                         --------->ANAC58                <---------O2                                         --------->ANAC46                --------->O2                                      ----------->HVH21          ---------->CDC5                                      ----------->TGA1--------->YAB1   <-----------RAV1(2)                                    --------->At4g35610          ==================MYC_MYB <------ZmHOX2a(1)           <----------DOF2--------->MYB52(1)  ------>ZmHOX2a(1) --ZmHOX2a(1)       <---------ZAT14 <---------At4g35610        --------->TOE2(3)   agaggagagggtctcgagagagtgtattgagctttgatggctgacgaaacagactttgataatctccttagcgccatgtgagtaagaagattgaaggaaa  10709100                            <------ZmHOX2a(1)                          --------->ALFIN1                                           <----------ID1                         <------ZmHOX2a(1)                                   --------->HSFB2a(2)                    <---------YAB1           <---------TOE2(2)     --------->YAB1   ----------->GT1 <              <---------TOE1(3)         --------->MYB52(1)  <----------ID1   <---------HSFB2a(2)    -              <---------TOE2(3)<------ZmHOX2a(1)       <---------AtLEC2 <---------ZAT2   ---------->DOF2   tgagggtttttggtttagggttatgaaggaggaggaagaagacgacggaggttttttacatggagacaagcgtaagcttggagaagagggaaaaagaagt  10709200                                          <<<<<<<<<<<<<<<<<LFY                                          >>>>>>>>>>>>>>>>>LFY                                  --------->YAB1                               *TSS <---------YAB1                                   <-----------GT1                         <---------HSFB2a(1)                              --------->TOE1(3)                         --------->HSFB2a(1)--------->AtMYB61             --------->TOE2(3)                         --------->HSFC1(2) <---------ALFIN1              <---------MYB59  <-------TEIL      ---------->DOF2    <---------HSFC1(2)--------->MYB46(3)            <---------ANAC55(2) ---------HSFB2a(2) <---------HSFB2a(2) ------>ZmHOX2a(2)        --------->ANAC58  <----------DOF2 -------->HSFB2a(2) --------->HSFB2a(2) --------->MYB46(3)       --------->ANAC58 <---------GLK1(2)--   ttgtagaagaaagtcatttcatcgagaagtttccagtgatgatccaccactgggtttttctataggcaggctaatacctaaaccgattttcggttcagtt  10709300                                                                             <----------DOF2                                                                             <---------DAG2     <----                                                 <---------AHL20(2)         <---------------AGL15                                                 --------->AHL20(2)         --------------->AGL15           <----------DOF2                   --------->AHL20(2)           ------>MYB83    <---------YAB1 ---------->CBF                              <---------AHL20(2)           ------>MYB46(1)<---------AHL20(1)   tagcaatttgagtcttttggtatagtagtaaaccaagttgcatttgttttattaattctagttttgctcgaaaacctccctttttttgtaatatgtttaa  10709400                  --------->AHL20(1)        <---------YAB1                       --------->YAB1                  <---------AHL20(1)       <-----------GT1                       <---------ICU4                  --------->AHL20(2)      --------->YAB1                     <---------ICU4                  <---------AHL20(2)     <---------YAB1                     <---------YAB1       <---------ANAC58               <---------AHL20(2)                  <---------ICU4       <---------ANAC58               --------->AHL20(2)                  --------->YAB1       <---------ANAC46               --------->AHL20(1)            <----------DOF2     <---------YAB1<---------YAB1<---------ATHB12                <---------YAB1<---------YAB1      -- -----TOE2(3)    --------->AHL20(2)   <---------AHL20(1)      <---------YAB1--------->ICU4         <-   gaaaattttgcttgtttcattatatttcacaacaaatcaatttattatcaatacatatatatgtattattctttattcattattcatgacatgaacagat  10709500                                              <---------AHL20(2)                                             <---------AHL20(2)                                             --------->AHL20(2)                      --------->YAB1             --------->ARR11(3)              --------->AHL20(1)                --------->ANAC58           ------->TEIL                      <---------AHL20(1)                --------->ANAC58      <---------ANAC55(2)                    <---------ARR11(3)              ---------->DOF2 <---------ICU4                        --------->LBD16             <---------bZIP60(1)              - ------->ANAC55(2)                <-----------GT1 <-----------GT1  --------->bZIP60(1)  <---------ICU4 --------ANAC55(2)        <---------ANAC55(2)--------->ARR11(3) ----------->HVH21   <-------TEIL ----   taagtattacatgaacatattgagtattacatatattcacccgtgaatatatttacccattattcactgacatcaaatgaaaagcattcattaagacatt  10709600                                       <------MYB83                                   <---------MYB46(3)                                   --------->MYB52(2)                                   --------->MYB46(2)                                   --------->MYB111(2)         <------MYB83                                   --------->MYB111(1)         <------MYB46(1)                              <---------TOE2(3)             <-------GAMYB                           <---------MYB52(2)              <---------MYB46(3)                          ------>MYB46(1)                  --------->MYB111(2)                          ------>MYB83 <------MYB46(1)     --------->MYB46(2)                        --------->MYB46(3)                 --------->MYB52(2)                        <---------MYB111(1)                --------->MYB111(1)                      -            <---------ATHB12 ---------->DOF2          --------->DAG2                              --- ------>GAMYB --------->WOX13(1)------------>MYB.PH3(2) ------------>MYB.PH3(2)                   <-- ----->MYB52(1)        <------NtERF2<-------GAMYB    ---------->DOF2         ---------->DOF2      ---   aacagacatagaaaatcattcaggcaccaactaaagttagttggtatcaccaaaataaagttagttggtatcaccaaaataaagtttcttcatagtagcc  10709700  Previous    Next  AGI:  At2g25140.1    Description:  CLPB-M/CLPB4/HSP98.7 (HEAT SHOCK PROTEIN 98.7); ATP binding / ATPase. similar to CLPC (HEAT SHOCK PROTEIN 93-V), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G50920.1); similar to APG6/CLPB-P/CLPB3 (ALBINO AND PALE GREEN 6), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT5G15450.1); similar to ATHSP101 (HEAT SHOCK PROTEIN 101), ATP binding / ATPase [Arabidopsis thaliana] (TAIR:AT1G74310.1); similar to ClpB [Phaseolus lunatus] (GB:AAF91178.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44278.1); similar to hypothetical protein OsI_005974 [Oryza sativa (indica cultivar-group)] (GB:EAY84741.1); contains InterPro doma Range:  from: 10704782    to: 10709231    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g25150.1    Description:  transferase family protein. similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT2G23510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21346.1); contains InterPro domain Transferase (InterPro:IPR003480) Range:  from: 10709442    to: 10711373    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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