Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->ICU4                            <---------YAB1                          <--------HAHB4                          <---------ICU4                          -------->ATHB1                          -------->HAHB4                          --------->YAB1                          <---------AHL20(2) --------->AHL20(2) ------TEIL               --------->ATHB51   <---------AHL20(2) --ANAC58                <---------YAB1    <---------AHL20(2)                --------->YAB1 --ANAC58                <---------ATHB51  --------->AHL20(2)           --------->AHL20(2) ->ANAC55(2)             <---------ATHB12--------->AHL20(2)      ----------->GT1       <---------AHL20(2) --ANAC55(2)             --------->ICU4  <---------AHL20(2)<----------DOF2  <---------YAB1     ------   attcatttcttatacgcttgaaatctaattattattagcttatatatatatataagtatttcttttgttgtaaaaaaaatgataagaatttttttgtcaa  10696600                                                   <---------YAB1                                            ----------->GT1                                            <------MYB46(1)                                           --------->MYB111(2)                               <XXXXXXX                                           --------->MYB46(2)                              <---------LBD16                                           <---------MYB46(3)                         --------->AHL20(1)                                          <---------MYB55(1)                          <---------ARR11(3)                                          <--------P  <---------WOX13(1)              --------->ARR11(3)                                         <-------GAMYB<---------YAB1                 <---------AHL20(2)                                        <---------MYB46(3)                         --------->AHL20(2)                            <---------ALFIN1<------MYB83                           <---------AHL20(2)                        <---------RAP2.6(2)--------->MYB111(1)                   <---------AHL20(2) ---->DOF2<----------DOF2 ------>NtERF2<---------AtMYB61 <---------TOE2(3)       --------->AHL20(2)   agctatatagttcttttcgagttgtttcggccactcgagttttggttggtaatttgattaatgtttcaaaatactatgtgtatatatatatattcagggt  10696700                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)                                                                           --------->AHL20(1)                                                                           <---------AHL20(1)          --------->AHL20(2)                                         <---------AHL20(2)          <---------AHL20(2)                                         --------->AHL20(2)         --------->AHL20(2)                                     --------->AHL20(1)              <----        <---------YAB1                                      <---------AHL20(2)  ----------->GT1 <----      <---------ICU4                                       --------->AHL20(2)<------------CBF <------     --------->ICU4                                   ------------>CBF    --------->AHL20(2)  -------     <---------YAB1<---------GLK1(2)               --------->MYB59 <-----------TBP       --------->AHL20(2)  <---------YAB1--------->AHL20(2)              <-----------HVH21<---------AHL20(2)      --------->YAB1 XXXXXXXXXXXXXXMIR864-3P    <----------DOF2    <---------ZAT6   <---------AHL20(1)   <---------YAB1 <   atttttgattattaaaaaaaaaattctctacttttatgcatactattcagtgttaggccaattttatatatttatattaaattggttaaaattataaaga  10696800                                                        <---------AHL20(2)                                                       --------->AHL20(2)                                                     --------->TOE2(3)                     --------->YAB1 -----GLK1(2)                                        --------->TOE1(3)               --------->YAB1 --------CBF                                   --------->YAB1                 <---------ZAT14 ---YAB1                                      <---------YAB1                  --------->ZAT14       < -->ICU4                                    --------->WOX13(1)            <-----------GT1 <-------TEIL ---------ZAT6         <---------YAB1    <---------ARR11(3)        --------->YAB1   <---------YAB1  <   ttgtgttatgttgatatgtcaagttatgttttcactcgtacattatctatcataacattaaatattcaggcataatatactatactatcatattcatatc  10696900                                                                                              <------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                          ---------->DOF2                                                                                      <---------At4g35610                                                                                      --------->At4g35610                                                                                      --------->ZAT2                                                                                      <---------ZAT2                     <------------CBF                                                ----------->RAV1(1)                     >>>>>>>>>ARR2                                                 --------->LBD16                    --------->ATHB12                                              --------->ANAC58           ------------>CBF ----------->GT1     <-------GAMYB                     --------->ANAC58          <-----------GT1   <---------ANAC46    <---------ANAC46                  --------->ANAC46 ---------DAG2     <---------YAB1       ------->TEIL       ---------->DOF2       <---------LBD16   -- ----------DOF2<---------ATHB12 ---------->DOF2----------->GT1               ----------->HVH21-------   aacttttttttttttcaatctttgattgtagggtgaaagacgaatttgtgggttataaaacaaaagctcaaatttcactatgacccgcagcagaaagttc  10697000         <---------ARR11(3)         --------->ARR11(3)     ---------->DOF2 <----------ID1 ---ARR11(3) >HSFB2a(1) -HSFC1(2)      -------->ZAP1                                                                     --- >HSFC1(2)    <---------WRKY18(1)                                                           --------- -HSFB2a(1)  --------->WRKY12            --------->ICU4                      --------->MYB52(1)   <-- ------->MYB52(1)                   --------->ANAC58                        --------->ARR11(1) <----- -->ARR11(3) --------->WRKY38(1)    --------->ANAC58 <-----------RAV1(1)---------->DOF2  --------->At4g35610   ttaacgaaaaagatgttgaccgagaaaatgaatgaagcgagccaagatgaagacaatgttgcattgtcgaacaccaaagaaacggagaagaagcagagga  10697100                                                        --------->DAG2                             <-             <---------ANAC46                          ---------->DOF2                            <--        <------ZmHOX2a(1) --------->YAB1         <---------ANAC58                           --------- ------>At4g35610  ---------->DOF2               <---------ANAC46                         <---------GLK1(1) >At4g35610  <---------ANAC58                    <---------ANAC58                   <---------ANAC46 -------At4g35610<------ZmHOX2a(1)          <------ZmHOX2a(1)                       <---------ANAC58 -ZmHOX2a(1) <---------ANAC58        ---------->DOF2 <------ZmHOX2a(1)              <---------ANAC58   agcggaagaaggattgcgaggaaaagaataagaagaagcgaaagaaggattgcgaggaaaagcatgagacgaaggaaatggagttagcgtggaaacctga  10697200                                           ----------->GT1                                --------->MYB46(3)                             <---------TOE2(3)    <----------ID1                         --------->ANAC58        --------->ANAC58     <---------TOE1(3)    ----------->GT1                        --------->ANAC58        --------->ANAC58     --------->MYB59    ---------->DOF2                      --------->ANAC46 --------ARR14(2)    --------->O2          <----------ID1                         <---------ANAC58 ----ZmHOX2a(1)      <---------O2         ----------->GT1--------->DAG2           <---------ANAC58 -->RAV1(2)  <---------MYB52(1)    <---------ANAC46     ---------->DOF2      --------->ANAC55(2)   ggattgtgctaagccattaggcgaagtgagtaaggttactgggaagggaaaaaagaaaaaaagtcatttcaaaacattcacgtttcgaggcaaccaatat  10697300                          <---------WOX13(1)                       <---------YAB1                  --------->ANAC55(2)      <----------DOF2                 <---------TOE2(3)   ---------->DOF2                <-----------GT1   --------->TOE2(3)              <----------DOF2     <----------DOF2     <---------AHL20(2)           <---------ANAC58    <-----------GT1       --------->AHL20(2)           <---------ANAC46<---------AHL20(2)        <---------AHL20(2)            --------->YAB1           <---------ANAC58--------->AHL20(2)----------->HVH21                --------->AHL20(2) ----   gcgctggtgagtttcgttttacgttttgatttattactttaaaggctttgacatattaatttttaaaactggtttgcaaaaaaaatcaaaatacacaaac  10697400                            --------->YAB1                                                     <-----                          --------->AHL20(2)                                                   ------                          --------->AHL20(1)                                                ---------                         --------->YAB1               <---------AHL20(2)                   <---------YAB1                 <------MYB46(1)                     <---------YAB1                       <---------AHL20(2)                 <------MYB83                      <---------ICU4                         --------->AHL20(1)                <---------MYB46(3)             <---------AHL20(2)                         --------->AHL20(2)               <---------ANAC46               <---------AHL20(2)                         --------->YAB1               <---------ANAC58          <---------ANAC46    <----------DOF2  <-----------GT1  ------ ----->TOE2(3) <---------ANAC58--------->YAB1 --------->AHL20(2)     <---------AHL20(1) <---------ATHB51   ctatatatgtggacatggctggtccaaaaataataaaaacatggcgaatttaatatttattgtctttctaatatgttttttttcatttcaattataataa  10697500  Previous    Next  AGI:  At2g25120.1    Description:  bromo-adjacent homology (BAH) domain-containing protein. similar to bromo-adjacent homology (BAH) domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G23120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62823.1); contains InterPro domain Bromo adjacent region; (InterPro:IPR001025) Range:  from: 10697013    to: 10698648    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version