Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->GLK1(2)                                                      <---------GLK1(2)                     <--------                                              --------->ANAC58                              ---------                                              --------->ANAC46                            --------->At4g35610                                              --------->AtLEC2                            <---------ZAT2                        --------->TOE1(3)     --------->ANAC58                            <------NtERF2               ------------>MYB.PH3(1)       --------->WOX13(1)                           <---------At4g35610               <---------ARR14(2)           ---------->DOF2                               --------->ZAT2       --------->HSFB2a(1)    <---------ARR11(3)      --------->ARR14(2)                 ------>NtERF2       <---------HSFB2a(1)    --------->ARR11(3)      <---------ARR14(2)                <---------DEAR3(1)     ---------->DOF2    --------->TOE2(3)  --------->WRKY18(1)                         --------->LBD16   --------->LBD16  --------->DOF5.7(2)    <---------MYB52(1)                         --------->DEAR3(1) <---------LBD16    <---------MYB52(1)    <-----------HVH21<---------LBD16  --------->ALFIN1<-------- ------ICU4    --------->ARR14(2)        --------->ANAC46 <---------LBD16  --------->At5g28300 -----YAB1    --------->GLK1(1)    <---------DAG2--------->MYB52(1)      <---------DEAR3(1)<---------DEAR3(1) --->TOE2(3)  <---------GLK1(1)<------ZmHOX2a(2) ----------->RAV1(1)    <---------LBD16<---------LBD16   caatgcggaaagtccgaaatccgttaccttaagatcaccttctccgtcaagcaacagattctcgggtttaatatcgcggtggaaaacaccgcggctgtgg  10679300                                                       <---------HSFB2a(1)                                                       <---------ZAT2                                                       --------->ZAT2                                                       --------->HSFB2a(1)                                                       <---------HSFC1(2)                                                       <---------At4g35610                                                       --------->HSFC1(2)                           -                                                       --------->At4g35610                          <                                                    <---------MYB52(1)                              <                                                   --------->LBD16                                 <-                                                  <---------LBD16                                  --                                                  --------->HSFB2a(2)                             <--                                                  <---------HSFB2a(2)                            ----                                                 <---------LBD16                                -----                                                ================================HOX2a_HOX2a     <----                     <---------MYB46(3)       ------>ZmHOX2a(2)                                <-----              --------->GLK1(1)              <------ZmHOX2a(2)                                -------              <---------GLK1(1)             --------->AGP1                                  ---------             <---------ARR14(2)             <---------GLK1(2)                               ------>NtERF2         <---------LBD16                    <---------ARR11(3)                        <---------ARR11(3)         --------->LBD16                    --------->ARR14(2)                        --------->ARR11(3)      <---------At5g28300                   <---------ARR14(2)                     --------->DAG2---- -MYB46(3)   --------->ARR14(2)             --------->ARR11(3)            <---------ICU4   --------->ANAC46 >ALFIN1--------->DEAR3(1)                ----------->ARR10    <---------CCA1(2)  ---------->DOF2---- ---RAV1(1)--------->LBD16       <----------DOF2------>ZmHOX2a(1)        <------ZmHOX2a(2) --------->DEAR3(1)   caaaaatccaccgcggatatcaattgttggaaatactttctggctagatcctccgggagcttcccatctctatcgatcatttcgaaaagctctccgccgt  10679400                                                                                              ------>ZmHOX2a(2)    --------->ANAC58                                                                     <------NtERF2    --------->ANAC58                                                                    <---------RAP2.3(1) <---------SPL7                                                                         ------>NtERF2 -------->ANAC55(2)                                                                    <---------DEAR3(1) ---------ANAC58                                                                      --------->RAP2.6(3) ---------ANAC58                                             ------->MYC3       --------->ANAC58 --------TOE2(3)    --------->GLK1(2)              <---------ZAT2               --------->ANAC58 ------------->AtSPL3                              --------->GLK1(1)         --------->ARR14(2) -------DOF5.7(2)   --------->ARR11(3)             --------->At4g35610       <---------ARR14(2) ----->WRKY38(1)    <---------ARR11(3)             --------->ZAT2           =========================HOX2a_HOX2a ---->DOF5.7(2)     --------->ARR14(2)           <------NtERF2         <---------ANAC46<---------ANAC46 -----MYB52(1)      <-----------ARR10           --------->LBD16      --------->MYB52(1)<---------RAP2.3(3) --GAMYB ----------->TGA1                      --------->ANAC46     ----------->HVH21--------->MYB52(1) -->DEAR3(1)        --------->ARR14(3)        --------->HSFB2a(2)   ----------->TGA1----------->TGA1 >LBD16  ----------->HVH21   <----------DOF2  <---------HSFB2a(2) <---------AtLEC2  ----------->HVH21 ----->WRKY12       <---------ARR14(3)        <---------LBD16<-------MYC3   <------ZmHOX2a(1)<------ZmHOX2a(2) ------->HVH21      <---------ARR14(2) <---------MYB52(1) <---------ALFIN1  ========================HOX2a_HOX2a   tgacgtactccatgacgaagaaaatcttcttctttgtagccattacttcgcggagctcgaccacgtttggatgacggaggagacgcatgacggcgatctc  10679500                                                                   --------->TGA2(2)                                                                  <-----------TGA1                                                                  <-----------HVH21                                                                 --------->ANAC58                                                                 --------->ANAC58  --------->GLK1(1)                                                                 --------->ANAC55(2)                                                                 <---------ANAC55(2)                                                                 <---------bZIP60(1)                                                                 --------->bZIP60(2)        <--------                                                                 --------->ANAC46 <---------ARR11(3)                                                                 <---------TGA1a  <---------ARR14(3)                                                                 --------->TGA1a  --------->ARR11(3)                                                                 ====================================                                                                 <---------O2     --------->ARR14(2)                                                                 --------->O2     <---------ARR14(2)                                                                 --------->bZIP60(1)------>ZmHOX2a(2)                      --------->ANAC58                          <-----------bZIP910(1)      <--------                      --------->ANAC58                          <-----------STF1 <---------GLK1(1)                      --------->O2                         <---------WOX13(1)--------->ALFIN1                      --------->ANAC46                    <---------ANAC58 <---------DEAR3(2)                      --------->bZIP60(2)                 <---------ANAC58<---------DEAR3(1)<--------                 --------->ANAC46                       <---------YAB1    <---------ATERF1(2)--------                 --------->ANAC58                     =====================bZIP_DOF<---------GLK1(1)                 --------->ANAC58                     --------------------->WRI1 --------->GLK1(1)               --------->YAB1             =================================bZIP_DOF<------ZmHOX2a(2)               <---------ICU4       <-------MYC3      <----------DOF2  --------->DEAR3(1)   <--------              <---------ATHB12      ------->MYC3    ----------------------->TaNAC69(2)      <-------- <---------TOE1(2)    ----------->HVH21   <----------DOF2--------->ATHB12<---------LBD16    ---------   tcgttcgatttgctccatcatgccacgacgtttgaaaacgtggtcttttttgatgactttgattgccacgtcatcgccggtggagatctctgttccgtga  10679600                       --------->LBD16                       <---------HSFB2a(2)                       --------->HSFB2a(2)  <----------DOF2  --------->ARR14(2) -ANAC58           <---------ARR14(2) ============bZIP_DOF <---------ANAC46                               <---------TOE2(3) -ANAC46       ----------------->AGL1                       <---------ZAT14 -ANAC55(1)   <---------DOF5.7(2)                         --------------->AtSPL3 ->LBD16      --------->MYB52(1)                          --------------->AtSPL8 -ANAC55(2)   <---------At5g28300                      --------->ANAC58 -ANAC58     <-----------GT1                           --------->ANAC46                         ----- >ANAC55(2)--------->HSFC1(2)                          --------->ANAC58                   <----------DOF2   tacactttggcgaagttaccggttccgagaagtcttccgatgttgtatttgtcgaacaagacagtactactacggtttgattcttccattgtctttgtct  10679700                                                                    --------->At4g35610                                                               ----------->TBP                                                             <---------AHL20(2)                                                      <---------ARR11(3)                 --------->AHL20(2)                                                      --------->ARR11(3)    <---------AHL20(2)                                                     <---------CCA1(2)      --------->ATHB51        -                                                   <---------ANAC55(2)      --------->AHL20(2) <-----                                *TSS               --------->ANAC55(2)     <---------AHL20(2)<-------                            <---------ANAC46  <------MYB46(1)--------->AHL20(2)  <---------LBD16 ---- ----------->GT1          <---------ICU4      ----------->GT1<-----------TBP--------->ATHB12<-------- ------>HVH21            --------->ICU4       <------MYB83 <-----------TBP --------->ICU4<---------AHL20(2)   gactagttacaagtatatgtgagactaattatgtggaattttgtgatttggttacatatctatatatataagcagaaattatttgtggaatttttttatt  10679800                                                                                                <----                                                                                                -----                                                                                          ------>ZmHOX2a(2)                                                                                         --------->CCA1(2)                                                                                         <------ZmHOX2a(2)                                                                                        --------->ARR14(3)                                                                                        --------->ARR11(3)                                                                                        <---------ARR14(3)                                                                                        <---------AGP1                                                                                        <---------ARR11(3)                                                                                        --------->AGP1  <-----------RAV1(1)                                                                   <---------ARR14(2) <---------TOE2(3)                   --------->ZAT14                                    --------->ARR14(2) -------->YAB1                       <---------ZAT14                             ------->TEIL   <---- ------TBP               ----------->HVH21                                    <---------bZIP60(2) --AHL20(2)            <---------ANAC55(2)                                    <---------ANAC58  ----- ----->YAB1            --------->ANAC55(2)  --------->REM1(2)          ---------->DOF2----------->ARR10 -AHL20(2)  <----------DOF2          --------->ZAT18        --------->TOE2(3) <---------ANAC58  <----   tataatgttgtctactttgtttgatatgtgacgactaagtgaactgtgaagaaatgttctaatcttatctaaacaaagtgatgtgcctaagatctggcag  10679900       <---------AHL20(2)       --------->AHL20(2)    <---------ICU4    <--------HAHB4   --------->ICU4   <---------YAB1             <---------KAN4(2) --------->YAB1          ---------->DOF2 -----ZAT2          --------->ANAC58                --------->HSFB2a(2) ---->ZAT2          --------->ANAC58                <---------HSFB2a(2)                            -- -----At4g35610   ---------->DOF2       --------->ANAC58                                 <---------ANAC58 ---->At4g35610  --------->AtMYB61      --------->ANAC58                                 <---------ANAC58 --NtERF2    <----------ID1  --------->YAB1    --------->ATHB12     <---------LBD16<---------TOE2(3)-   ctagcataattaaatacgaccaaagccaaaagaataaccaagacgaaattgattcgcgaattgaactaaatcggggtttgctatttatgttgagtgccta  10680000                                                                                    --------->YAB1                                           ---------->DOF2   <---------ARR11(3)    <---------YAB1                                   <-----------GT1           --------->ARR11(3)   --------->ARR11(3)        --------->HSFB2a(2)   <---------AHL20(2)            --------->CCA1(1)     <---------ARR11(3)        <---------HSFB2a(2)   <---------YAB1                --------->RVE1(1)    --------->YAB1<-----   ----------->GT1          --------->CCA1(2)           --------->AHL20(2)      <---------ATHB12 -------->DOF2             <---------ARR11(3)           <---------AHL20(2)      --------->ICU4 ------ -------->DAG2 <---------YAB1 --------->AHL20(2) ----------->GT1      <-----------GT1         -------   aaaaagggttatagaacatgataaaactagatataattaacaaactaaagcatgaaaaataaatatctcgagttacgatgcaatgatcataagagaatga  10680100     ---------->DOF2                              ------>ZmHOX2a(1)    --------->YAB1     <---------AHL20(2)         <----------DOF2 ----ICU4              --------->AHL20(2)  <---------AHL20(2) --->ATHB12     ----------->GT1            --------->AHL20(2)----------->GT1           ----------->HVH21 -->ICU4      <-----------RAV1(2)      --------->AHL20(2)<-----------GT1        <---------TOE1(2)   tttcaataaaagtgtaacaggtgatttaaatccatttctatgtaaataaatcctttttttaaccagttaaacaatggtctcgcacatttctgaccatgta  10680200  Previous    Next  AGI:  At2g25090.1    Description:  CIPK16 (SNF1-RELATED PROTEIN KINASE 3.18); kinase. similar to CIPK5 (CBL-INTERACTING PROTEIN KINASE 5), kinase [Arabidopsis thaliana] (TAIR:AT5G10930.1); similar to CBL-interacting protein kinase [Gossypium hirsutum] (GB:ABP35583.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 10677546    to: 10679732    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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