Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------HSFB2a(2)                             <---------ANAC58                               <---------TOE2(3)                             <---------ANAC58                         <---------AHL20(2)     <-------                             <---------ANAC46                 --------->AHL20(1)          --------->YAB1               --------->MYB46(3)--------->HSFB2a(2)         --------->AHL20(2)     <-----------GT1          --------->YAB1  <---------TOE2(3)       --------->YAB1 <---------YAB1  <---------AHL20(2)   cttaagaagtatttataacaaacaaatttaggcttgtagaaaacaaatttagtcataaaacaaatatatgatttttttaagaattaatacaatattaact  10655300                                                       --------->YAB1                                                       -------->HAHB4                                                       <--------ATHB1                                                       --------->ATHB51                                                       <---------ICU4                                                      <---------YAB1                                                      --------->ICU4                                                      <---------ATHB51                                                    --------->YAB1             <----------DOF2                                                   <---------YAB1              <---------DAG2                                           <---------AHL20(2)            <---------ICU4                           --------->ARR14(2)    --------->YAB1         --------->ICU4                   <----------DOF2        <---------ARR11(3)           <---------TOE2(3)                   <---------DAG2         --------->ARR11(3)        <---------YAB1              <-----------TGA1            <---------AHL20(1)     <---------AHL20(2)              <-----------HVH21           --------->AHL20(2)     <---------AHL20(1)             --------->ANAC46             <---------AHL20(2)     --------->AHL20(2)              ====             <---------ANAC58             --------->AHL20(1)<---------YAB1  <-----------GT1      <--- ----GT1     <---------ANAC58 <-----------GT1   <---------YAB1   --------->AHL20(1)      --------->AHL20(2)   atatttcaaatatttgcgtcactttttcagatttacacattgaatatattttgataataattgttattttattaatgtttacttttttgtataaattatc  10655400                                                                   <---------MYB52(1)                                                             <---------GLK1(2)                                                           <-------TEIL                                                          <--------P                                                        <------MYB46(1)                                                        <------MYB83                                                       --------->MYB46(2)                 ---------->DOF2                       <---------TOE2(3)              --------->AHL20(2)                       --------->MYB111(1)       <-----------GT1            <---------YAB1       --------->MYB59    <---------REM1(1)   --------->DAG2           --------------->AGL15    ----------->GT1    --------->DAG2            <---------------AGL15                    <---------ANAC58 ================================================================MADS_MADS <---------ZAT6 <---------ANAC58 ------------AGL15    ---------->DOF2          --------->At4g35610<----------DOF2         <---------ANAC46   tattagttgtaacaaaataaaaagaaaaggggttttgttattgtttatcatctaaattaggtagattcctttagttagtgtttgtttttatgtcttgttg  10655500                                                                   --------->TOE2(1)                                                                   --------->TOE1(1)                                                              <---------ALFIN1                                                             ----------->HVH21                                                            --------->AtMYB61                                                            <---------ALFIN1                                                           --------->ANAC46                                                           --------->At4g35610                                                           --------->ANAC58                                                           --------->ANAC58                                                           <---------At4g35610                                                    <-----------RAV1(1)  --------->ATHB12                                                  <-----------RAV1(1)    --------->YAB1            --                                          <---------ICU4  ------->TEIL   <---------ICU4          ----                                          <--------HAHB4 <---------ALFIN1<--------HAHB4          ----                                          --------->YAB1--------->ZAT18 <---------ATHB12         ----                                         <---------YAB1 <---------ZAT18 --------->ICU4         ------                                  <---------GLK1(2) --------->ALFIN1    <---------YAB1<xxxxxxxxxxxxxx   agcgagtcatcaaggcttcgaacttgtattgtatcagagtcttatcattactctgtggtgcacctcacctcgtaatcatttcccctcatttgattccaca  10655600          --------->ANAC58          --------->RAP2.6(2)          --------->ANAC58          ------->GAMYB          --------->DREB2C(2)         --------->SPL7         --------->MYB46(3)         --------->DEAR3(2)        <---------ATERF1(1)      ----------->HVH21                                                                             - -------->DOF2                                                                                      < ----->ANAC58                                                                          ------->TEIL < ----->ANAC46                                                                         <---------GLK1(2) ----->ANAC58            <---------GLK1(1)                     ------------>AtMYB77   --------->ARR14(2) --->ANAC46  --------->DEAR3(1)                     <-----------GT1               ---------->DOF2   - xxxxxsmallRNA(si3)      --------->GLK1(1)         <---------CCA1(2)        --------->GLK1(2)    ----   cgaaagaagcgaccgccatcgtgttcgatttccaacttaagtatggaacccttgtatccctccaaggccagttagaagaagctagaaagaacctcacaaa  10655700                                           --------->TOE1(3)                                           --------->TOE2(3)                                         ------>MYB46(1)                 <-----------GT1      --------->MYB46(3)            ------->TEIL            <-----------GT1                      <---------ANAC46   ---------->DOF2               --------->ANAC55(2)            --------->ANAC58 -------->HSFB2a(2)       --------->LBD16------>MYB83           --------->ANAC58                  <-- ---------HSFC1(1)        --------->HSFB2a(2)           --------->ARR14(2)                   -------- ---------HSFB2a(2)       <---------HSFB2a(2)           <---------ARR14(2)      >>>>>>>>>>>>>>>>>LFY- -------->HSFC1(1)       <---------TOE1(1)*TSS     --------->MYB52(1)  --------->ZAT18      <-------- ----->GLK1(2)--------->KAN4(2)  <---------ANAC55(2) <---------ANAC46 ----------->HVH21     <xxxxxxxx   ttctagaaagcatgaatattcactagtccgagaataagtaaccaagcttaacatagcggatatagtaagcaagtgacctatattccactgtccaatcttc  10655800                                                    --------->ATHB51                                                    --------->ATHB12                                                    <--------ATHB1                                                    <---------ICU4   --------->YAB1                                  <---------YAB1                     <---------At4g35610  <---------ATHB12                                 --------->ICU4               <-------GAMYB -------At4g35610                          --------->ANAC46                     <---------At4g35610 ->YAB1      ---------->DOF2               --------->O2                         --------->At4g35610 -------->WOX13(1)                 --------->ARR14(2)                          --------->MYB52(2) -ATHB12----------->GT1 --------->ICU4--------->ANAC46                     <---------ZAT6          <x xxxxxxxxxxxxxxxsmallRNA(si3)      <---------ARR14(2)                 <---------REM1(1)          <---   agcaatcagagagagaaaagctagtcatgttggaacaaatactccacgagagaataattgctcaagacttggatgtagagtcagttgccgatgctatccg  10655900                               <----------DOF2                            --------->DEAR3(1)                            ------->GAMYB                           --------->MYB46(3)                           --------->DEAR3(2)                           <------------MYB.PH3(1)                        ------>ZmHOX2a(1)                       <---------MYB59                     <------ZmHOX2a(2)                    --------->ARR11(3)                    <---------GLK1(2)                    <---------ARR14(2)                                                           <---                    --------->ARR14(2)                                <------MYB83         <---------ZAT18                    <---------ARR11(3)                                <------MYB46(1)    --------->ANAC46                    --------->AGP1---------->DOF2                   <--------P           --------->ANAC58           <---------MYB52(1)  <---------DAG2                     <-----------RAV1(1)    --------->ANAC58          <------MYB46(1)--------->MYB52(1)                       --------->ALFIN1<---------ANAC58          <------MYB83------>ZmHOX2a(2)                     --------->ANAC58      <---------ANAC58 xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                        --------->ANAC58     --------->ZAT2  ---- ------MYB52(1)    <---------At4g35610            <-------TEIL------->GAMYB      <---------ZAT2  ----   ttgttcaaaggctggtatttcagatcctaaccgccttatagctagttttatgttcatgggacaaccaagtgttggtaagaccgagcttgccaaggcacta  10656000                                                                                             --------                                                                                             --------                                                                                             ========                                                                                             <-------                                                                                    <------MYB46(1)                                                                                    <------MYB83                                                                                   <---------DEAR3(1)                                                                                   <---------AtMYB61       <----------DOF2                                ------->MYC3               <-------GAMYB      <---------DAG2                                  <-------MYC2           <---------ZAT2  --------   <---------GLK1(1)                                  ------->MYC2  --------->MYB52(2) <-------TEIL  --------->ARR14(2)                     --------->CCA1(2)       --------->TOE2(3) <---------TOE1(2)  <---------ARR14(2)                    --------->ARR11(1)       --------->TOE1(3)<---------MYB52(1) ------ZAT2                           ----------->ARR10 ----------->GT1      <---------At4g35610 ----->ZAT2                  --------->YAB1       <---------At4g35610        --------->ZAT2<---------ALFIN1 ----->At4g35610  --------->YAB1   <------ZmHOX2a(1)  <-------MYC3<---------MYB52(1)<---------MYB46(3)   gctggataccttttcaacaatgaaaacacaatagtgaggatagatatgagttagcacatggaaaaaacgttagtctcacagctcgttggtgcatcacctg  10656100           --------->LBD16          <---------ANAC46          <---------ANAC55(2)      <-------GAMYB     <------MYB83     <---------MYB46(3)                                                                   ------->TEIL     <------MYB46(1)                                                                     <---------ALFIN1 <-----------RAV1(1)                                         <---------MYB46(3)        --------->RAP2.6(2) ->At4g35610        <---------MYB46(3)                   --------->ATHB12           --------->ARR14(2) --->RAV1(2)       --------->ALFIN1                <---------MYB59                  <---------ARR14(2) ============RAV<---------DEAR3(1)               --------->ARR11(3)             <---------HSFB2a(2) --O2--------->MYB52(2)     --------->MYB52(1)   <---------ARR11(3)             --------->HSFB2a(2) ->ZAT2  <---------LBD16   --------->AHL20(2) <------ZmHOX2a(1)               <------ZmHOX2a(2)   gctatgttggttacggagacggtgggaaattaactgaagttgttcgaaggagaccttattcagtggttcagtttgatgagatcgagaaaccgcaccttga  10656200  Previous    Next  AGI:  At2g25030.1    Description:  pseudogene, HSP100/ClpB, putative, similar to HSP100/ClpB GI:9651530 (Phaseolus lunatus); blastp match of 77% identity and 3.4e-113 P-value to GP|9651530|gb|AAF91178.1|AF203700_1|AF203700 ClpB {Phaseolus lunatus} Range:  from: 10655742    to: 10657529    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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