Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->ANAC58                                                        --------->ANAC58                                                       <---------------------WRI1                                                       <------NtERF2                                                     ----------->HVH21                                                     --------->At1g77200                                                     --------->RAP2.3(3)                                                     --------->DEAR3(1)                                                     --------->DREB2C(2)                                                    --------->DEAR3(2)                         ------>NtERF2              --------->RAP2.3(1)                         --------->ABI4(2)          --------->ERF1                     --------->PCF2                      --------->LBD16              --------->At4g35610                 ---------->ID1                     --------->DEAR3(1)            <---------At4g35610             <---------ANAC58      --------->LBD16<---------DEAR3(1)            <---------ATERF1(1)      ---------->DOF2    <---------LBD16  ------->PIF5 <---------ZAT14  ------>NtERF2           <---------AHL20(2)   --------->MYB52(1)<-------PIF5 ---------->DOF2  <------NtERF2       <---------RVE1(1)  --------->MYB52(1)--------->DEAR3(2)      <---------ANAC58           <---------CCA1(1)       <----- ---------MYB52(2)  --------->ATERF1(1)--------->LBD16------>NtERF2   <---------ARR11(3)       <----- -------->MYB46(3)  <---------LBD16  <---------LBD16<------NtERF2     --------->ARR11(3)       <----- ---------GT1<-----------RAV1(1)  --------->ZAT14 --------->ANAC46    <---------ARR14(2)  <---------ALFIN1 ----DOF2   <---------YAB1 <----------DOF2  <---------ANAC58    <---------HSFB2a(2)<---------ANAC58   taacaaaccggagtattgttgcaccggcgctttcagtaaaccggagacttgcccgccgacgaaatactcgaagatatttaaaggagcttgtcccactgcg  10581700                                                     <---------YAB1      <---------------AtSPL3                       --------->YAB1                                 <--     <---------ANAC46      ----------->ARR10       <---------ICU4                           <-------- ----ANAC58            --------->HSFB2a(2)        --------->ICU4                            <-------- ----ANAC46            <---------HSFB2a(2)     --------->ICU4                           <----------DOF2 ----ANAC58      <---------YAB1             <---------ZAT6     --------->GLK1(2)       <---------DAG2   tatagctatgtgtacgattatgcttcgagtagatttacatgtactagtgctaattatgttatcagtttctgttcttaggcatagtatagccttttttatt  10581800                                <---------YAB1                              --------->YAB1                             <---------ATHB12                           --------->WOX13(1)     --------->YAB1       <---------AHL20(2)    <---------YAB1        --------->AHL20(2)  --------->YAB1       <---------ICU4  <---------ICU4      <---------AHL20(2) <---------YAB1       <---------ATHB51<---------TOE2(3)                                          ---- --------->ICU4       --------->AHL20(2)                                                        ----- -------YAB1          --------->ICU4  <---------YAB1                                   ---------->DOF2 -AHL20(2)        --------->AHL20(2) <-----------GT1        --------->YAB1     ---------->DOF2  <---- -YAB1        <---------ATHB12<---------ICU4              <-----------GT1----------->GT1       <-----   gttattattatcaacaatgaataaataattaatcactattaacatagttttatgtttttttttcatcactatgaaatgtattaaagcaaaaaagactaat  10581900                                                                      <---------bZIP60(1)                                                                      --------->O2                                                             --------->YAB1                     <---------AHL20(2)                 --------->TOE2(3)        ---------->DOF2  --------->AHL20(2)            <---------ANAC55(2)    --------->TOE2(3)--------->AHL20(1)                ----------->GT1<---------O2 ----->TOE2(3)       --------->AHL20(2)               <---------TOE2(3) ------>GT1       --------->YAB1  ----------->GT1    --------->MYB52(1)  <---------ANAC46 -----ZAT6 ----------->GT1  ---------->DOF2     <---------AHL20(2)    --------->bZIP60(1) ----TOE2(3)  --------->AHL20(2) ----------->GT1--------->AHL20(2) --------->ANAC46       <----------   gttaaaacttaaaagattaaaaataaaataaaaagaagttaaaatgacatttaaataacgtaaaaataaacgacgtcgtttagccaaagtttctactatc  10582000                                                                             ------>MYB46(1)                                                                             ------>MYB83                                                                            --------->MYB55(1)                                                                           <---------MYB111(1)                                                                           <---------MYB59                                               <---------ARR11(3)          <---------MYB52(2)                                               <---------AHL20(1)          <---------MYB111(2)                                               --------->ARR11(3)          <---------MYB46(2)                                       --------->TOE2(3)                  --------->ANAC55(1)                                       <---------DAG2                     --------->ANAC55(2)                                 --------->ANAC58                         --------->ANAC46             <---------TOE2(1)   --------->ANAC58      <---------YAB1     <---------ANAC55(2)             <---------TOE1(1)   --------->ANAC46   <---------AHL20(2)    --------->ANAC58      <---------ANAC46  --------->ATHB12    --------->YAB1                --------->ANAC58 --------->ZAT2   <-----------RAV1(1)  <---------MYB46(3) <---------YAB1               <---------ALFIN1   <---------At4g35610  ------->TEIL     ------------>CBF  -------->P--------->AHL20(1)  --------->ANAC58  <---------ARR14(2) -GT1--------->ALFIN1  <---------ATHB12--------->TOE1(3)  *TSS     --------->ANAC58  --------->ARR14(2)   tatgtatgtggtggaacgaggtccaatggttgaacaagcaaccttatgatatattttatgagaagaggcaaacaacacctaacattggattcgagctctc  10582100                                                                 --------->GLK1(2)                                                        --------->O2                                                       ------>MYB46(1)                  <---------MYB46(3)                   ------>MYB83                     ------>MYB46(1)          ------>NtERF2                               <---------ALFIN1       <---------TOE2(3)          --------->LBD16                            --------->MYB46(3)     ---------->DOF2     -----         --------->ANAC46                         <---------ALFIN1          --------->ZAT14    <-----         --------->ANAC58                      ------->GAMYB    --------->ARR14(2)      -------->P         --------->ANAC58                    --------->ANAC46   <---------ARR14(2)      ------>MYB83      --------->GLK1(2)                    --------->REM1(1)    <---------GLK1(2)  --------->ZAT6   -      --------->ARR14(2)         <---------ARR11(3) --------->ANAC58   <---------ZAT14 ----------->RAV1(1)      <---------ARR14(2)         --------->ARR11(3) --------->ANAC58   --------->ZAT14--------->AtMYB61   tagtgaagaatccgccatggctgttccatttctaagctcttctctacaactcacacccacttctccgattctcttcactaaagtaacaccaacaccaata  10582200                                                                   <------NtERF2                                                                  ------>NtERF2                                                                  <-----------HVH21                                                                  <---------ATERF1(1)                                                                 <---------O2                                                                 --------->O2                                                                 --------->RAP2.3(2)                                                                 --------->DEAR3(1)                                                                --------->RAP2.3(1)                                                                --------->ATERF1(1)                                                               ------>NtERF2                                                               <---------ATERF1(1)                                                               --------->LBD16                                                              <---------ALFIN1                                                            <---------ATERF1(1)                                                           <---------ALFIN1                                                           <---------ARR14(2)                                                           --------->ARR14(2)                                                          --------->ABI4(1)                                                          <---------At4g35610      ------->TEIL                                                          ------>NtERF2            --------->GLK1(2)                                                          --------->At4g35610      --------->ARR14(2)                                                         <---------ALFIN1          <---------ARR11(1)                                                         --------->DEAR3(1)        <-----------ARR10                                                         <---------ATERF1(1)       <---------ARR14(2)                                                        --------->RAP2.3(1)       <---------ARR14(1)                                                       <---------ATERF1(1)   ------->GAMYB                                                       --------->LBD16      --------->MYB46(3)      ----------->RAV1(1)                              ------>NtERF2<---------DEAR3(1)      --------->AtMYB61                               --------->DEAR3(1)    <---------ABI4(2)      ------->GAMYB                                   --------->ANAC46      --------->DEAR3(2)     --------->MYB46(3)                               <---------ALFIN1      --------->ATERF1(1)  --------->MYB46(3)    --------->ZAT14             <---------ATERF1(1)   <---------ARR14(2) ---->YAB1  <------ZmHOX2a(2)   ---------->DOF2     ------>ZmHOX2a(1)     --------->ARR14(2) ----ATHB12--------->AGP1    --------->ANAC46      --------------------->WRI1--------->DEAR3(1) -------->ANAC46  --------->AtLEC2           --------->ANAC46 --------->DEAR3(1)  <---------CCA1(2) <   atccacaaccacagatcaacatgcactatacccacaaagcctcgtctacgtctcctccgccgctccgccgtcgctggaaccgccgtatctgatcaaacag  10582300                                                     <------NtERF2                                                   <---------ANAC46                                                  --------->ATERF1(1)                                                  <------NtERF2                                                  <---------LBD16                                                --------->ALFIN1                                                <---------DEAR3(1)                                              <---------bZIP60(2)                                             <---------TOE2(3)                                         --------->REM1(2)   <---------WOX13(1)               <----------DOF2          --------->ALFIN1   --------->ATHB12         --------->ARR11(3)            <-------MYC3<---------ANAC58         <---------ARR11(3)            ------->MYC3<---------ANAC58     xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------AtMYB61    --------->ALFIN1                  <---------ANAC55(1) <---------YAB1 --------->ALFIN1                     --------->ANAC55(2) --------->ICU4   ----------------------->TaNAC69(2) ------ZmHOX2a(1)                    <-----------------------TaNAC69(2)<------ZmHOX2a(1) <---------MYB59   aaggaggtggagatgttcttttaaaccctgaagaagagaaacgtgttgaggtggcggattatgattggacagaggaatggtatccattgtacttaactaa  10582400                                                                                                    -                                                                                                  <--                                                                                              =======                                                                                              ------>ZmHOX2a(2)                                                                                             ========                          <------NtERF2 ------>ZmHOX2a(2)        --------->At5g28300         <------ZmHOX2a(2)               ------->TEIL<---------ALFIN1                    <---------DEAR3(1)           <--------             <-------TEIL ----------->HVH21          ----------->GT1                        ---------           --------->ARR14(2)          <------ZmHOX2a(2)  ---------->DOF2                   <--------           <---------ARR14(2) --------->DEAR3(1)     <---------ANAC46     <---------ALFIN1  ---------   aaacgtccctgaagatgcgcctcttggcctcaccgtctacgatcgtcaaattgttttgtataaagacggtgaaggaacacttcgttgttacgaagatcgg  10582500  ------>ZmHOX2a(1) ---------------->AGL1 -------ZAT18                                                    --------->At4g35610 ========HOX2a_HOX2a                                            --------->GLK1(2) ========HOX2a_HOX2a                                          <------ZmHOX2a(1) -ARR14(2)                                    --------------->AtSPL8 >ARR11(3)                           --------->MYB46(3)     <---------TOE2(3)                  ------ -ARR11(3)                        --------->MYB46(3)<----------DOF2                 <----------DOF2 < >ARR14(2)                      --------->AtMYB61---------->ID1<---------GLK1(2)  ---------->ID1 <---   tgtcctcatcggtaagataaatcatctagcaaaaccacaaccactagttttgtacttttgtttaggaatctgaaattgagttttgtctttttttttataa  10582600  Previous    Next  AGI:  At2g24810.1    Description:  pathogenesis-related thaumatin family protein. similar to pathogenesis-related thaumatin family protein [Arabidopsis thaliana] (TAIR:AT1G19320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15082.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80000.1); contains InterPro domain Thaumatin, pathogenesis-related (InterPro:IPR001938) Range:  from: 10580941    to: 10581778    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g24820.1    Description:  TIC55 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55); oxidoreductase. similar to ACD1 (ACCELERATED CELL DEATH 1) [Arabidopsis thaliana] (TAIR:AT3G44880.1); similar to hypothetical protein OsI_009063 [Oryza sativa (indica cultivar-group)] (GB:EAY87830.1); similar to Rieske iron-sulfur protein Tic55 [Pisum sativum] (GB:CAA04157.1); similar to Os02g0792800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001048363.1); contains InterPro domain Rieske [2Fe-2S] region; (InterPro:IPR005806); contains InterPro domain Pheophorbide a oxygenase (InterPro:IPR013626) Range:  from: 10582058    to: 10584017    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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