Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                              -------                                     --------->ARR14(2)                   --------->ALFIN1    <------       --------->At4g35610           --------->KAN4(2)            ---------->DOF2             <------       <---------At4g35610           <---------ARR14(2)        <---------ZAT6        --------->DAG2 -->HVH21  -------->P              <---------KAN4(2)         ----------->GT1        ---------->DOF2   caaaaaatgagcttaccctctatttcacatatgtaagaatatactctaattagactcagcatgtagtataaagaaggtgttgacaaaaaagctcaaataa  10569400                                                                                         <------MYB46(1)                                                                                         <------MYB83                                                                                         --------->ANAC55(2)                                                                                         <---------ANAC55(2)                                                                                        --------->MYB46(2)                                              <---------AHL20(2)                  --------------->AGL15                                             --------->AHL20(2)                   <---------------AGL15                         <---------ICU4   --------->YAB1                         ----------------->AGL2        --------->MYB52(1)           --------->GLK1(1)                           ----------------->AGL1      <---------MYB52(2)--------->ICU4   <---------YAB1       --------->AHL20(2) <-----------------AGL1 ---ATHB51      ------->TEIL         <---------GLK1(1)        <---------AHL20(2) ----------------->AG -->AHL20(2)    <---------LBD16  --------->ANAC58     ----------->GT1            <-----------------AG ---AHL20(2)  --------->ZAT14    --------->ANAC58    <---------TOE2(3)   --------->YAB1 --------->MYB59 ---ATHB12    <---------ZAT14    --------->ANAC46    <---------TOE1(3)--------->YAB1    <---------TOE2(3)   ttcgataaactaacaatgcacgggtactaattaacaaggaattctcataaaattgaaggtaaatttaaacaacaataagagcatcccaattaggtaagag  10569500                    --------->ANAC58                    --------->ANAC58                 <------ZmHOX2a(2)        <---------AHL20(2)                                              ----------->HVH21      --------->ANAC55(2)           ------->GAMYB                     ----------->RAV1(2)      <---------ANAC55(2)        ----------->RAV1(1)           <----------DOF2        -------->P     --------->MYB59<---------TOE2(3)    --------->ALFIN1   <-----------GT1          <-----------GT1   atttagttaagtaattgcgatcaaggaaacaagtacaacagaagtggaagtctgtctctatatcactttcttccctgatgcataaacttacctcttgttc  10569600                                                                             --------->ZAT18                                                                             <---------ZAT18                                                                             <---------ZAT14                                                                        --------->MYB46(3)          -                                                                       >>>>>>>>>>>>>>>>>LFY     <----                            --------->AHL20(2)                  --------->DAG2    <---------ZAT14  --                 --------->YAB1                                 <---------------AtSPL8     <---------ATHB12                <---------YAB1                                 ---------->DOF2    --------->ZAT14----          <---------TOE2(3)<---------ATHB12               ----------->GT1    --------->ZAT14   ------   acaaactttgttaacattttgataatgcaatgaaatgaaattagaaattcaaaacaaaaatagagaaaagtacaaccagtggactatagtccaattagtc  10569700                            <---------ICU4       ------------>CBF  --------->YAB1      <<<<<<<<<<<<<<<<<LFY --------->ICU4 ---------->DOF2     ----------->GT1 ------>GAMYB      --------->At4g35610 -----WRKY38(1)    --------->ZAT2 ------->MYB46(3)  <---------At4g35610            --------->HSFB2a(2)               <<<<<<<<<TBF1 ----->WOX13(1)    <---------ZAT2         ---------->DOF2                     --------->HSFB2a(1) --->WRKY18(1)   <------NtERF2  --------->MYB59   <---------HSFB2a(2)        ------->TEIL       -----   aaccaaagtaacaatgggccgagctgataatatttaggcccaaaaaaagcctctggacgaatcagagacactggaaatgaacgttcttcttcgcactaac  10569800                             <---------------------WRI1                          --------->ALFIN1                  ------>ZmHOX2a(2)                 --------->CCA1(2)                 <------ZmHOX2a(2)                <---------ARR11(3)                --------->ARR11(3)                <---------ARR14(2)                --------->ARR14(2)                <---------AGP1        ------>ZmHOX2a(2)                          ------>ZmHOX2a(2)               --------->RVE1(1)  <---------KAN4(1)                         ------>ZmHOX2a(2)        >>>>>>>>>TBF1     <---------AtMYB61                                <---------At4g35610     *TSS     ----------->ARR10   --------->HSFB2a(1)               ------>ZmHOX2a(2) ---------->DOF2--------->AGP1   <---------KAN4(2)                --------->ARR11(3)       >>>>>>>>>TBF1 ---->ZAT6  ---------->DOF2<---------MYB46(3)   >>>>>>>>>TBF1     <---------ARR11(3) <---------ATHB12   tctcaaagaagaagaaaagatctgagaggtggtcgaatgatccaagagaagaagaacaatctctcttagatcgtttgatctgatccaatcgaagaagaag  10569900                            ----------------->AGL1                            <-----------------AGL1                            <-----------------AG                   <---------HSFB2a(1)                   --------->HSFB2a(1)                  <-----------ARR10                  --------->ARR14(2)                            ------>ZmHOX2a(1)                  <---------ARR14(2)----------->GT1        --------->TOE1(1)                --------->LBD16  <----------DOF2           --------->TOE2(1)              <---------LBD16<---------ANAC58         <---------ARR14(2)                         ----             --------->ANAC46<---------ANAC58         --------->ARR14(2)                     --------   --------->GLK1(2)--------->KAN4(2)     ---------->DOF2 ------>ZmHOX2a(1)              --------->TOE2(3)   atgggaatcttattcacgcggatgttctcttccgtctttggtaacaaagaagctcgaatcctcgtcctcggtctcgacaatgctggaaaaaccacaatcc  10570000                                                                                        <-------GAMYB                                                                                       <---------ANAC58        <---------At5g28300                                                            <---------ANAC46       <-----------GT1                                          <---------YAB1         <---------ANAC58 -->ZmHOX2a(1)    <---------ATHB12                   <---------STY1(2)     <---------MYB52(1)      <- ->ARR14(2)  --------->TOE2(3)                       --------->STY1(2)   ------>ZmHOX2a(2)  <--------   tctgtaaattcactgcctcaatctttcgcattgtgtaatagatttgatatttagtagctagggtttttgattcgatcgttttttgagttgcgttgatgtt  10570100                              --------->ALFIN1                            --------->At4g35610                            <---------At4g35610                          <-----------RAV1(2)                        <-----------HVH21                                                        ----                    ------>ZmHOX2a(2)                                                          <-----                   <------ZmHOX2a(2)                                                           ------                   --------->RAP2.6(3)                         ------->TEIL                    ------                  --------->ARR14(2)                          <---------CCA1(2)                <----- <---------GLK1(2)<---------ARR14(2)                   --------->LBD16                  <---------GLK1(2) --------YAB1  <---------HSFB2a(2)                    <---------ANAC46       <---------YAB1 <-------- -TOE2(3)      --------->HSFB2a(2)                 --------->GLK1(2)         <---------ATHB51  ------   tttgattctctgtgattccagatcggcttcagatgggggaagttgtctctacgattccgagtatgtatctaatctctcgattattgtatagattatggat  10570200            <---------YAB1          <---------ANAC58          <---------ANAC58          <---------ANAC46                                                  --------------->AtSPL8     --------->ANAC55(2)                         <---------At4g35610       --------->ZAT14 -->ZmHOX2a(2)                             <----------DOF2                 <---------ZAT18 ----ARR14(2)                             ------>ZmHOX2a(2)                <---------ZAT14 ->TEIL ------->TEIL                      <---------ICU4                 <---------ZAT14 --->ARR11(3)          ------->TEIL     --------->ARR11(3)    <---------TOE1(3) ----AGP1 --------->YAB1                <---------ARR11(3)    <---------TOE2(3) -TOE2(3) ----------->GT1            ------>ZmHOX2a(2)       <-----------GT1--------------->AtSPL3 --->ARR14(2)     <-----------GT1   <---------At4g35610      <---------DOF5.7(2)               <-----   ctagtttatgtatcgtgattttacgaattttggttttgatctgatctttgcagctattggatttaacgttgagactgtgcagtacaacaatatcaagttt  10570300  Previous    Next  AGI:  At2g24765.1    Description:  ARF3/ARL1/ATARL1 (ADP-RIBOSYLATION FACTOR 3); protein binding. Identical to ADP-ribosylation factor 3 (ARF3) [Arabidopsis Thaliana] (GB:P40940); similar to ATARFA1B (ADP-RIBOSYLATION FACTOR A1B), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT5G14670.1); similar to ADP-ribosylation factor 1 (GB:Q96361); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain ADP-ribosylation factor; (InterPro:IPR006688); contains InterPro domain GTP-bind Range:  from: 10569805    to: 10572277    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version