Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     --------->ATHB12                                                                  <---------YAB1                                                                =======================HOX2a_HOX2a                                                                ------>ZmHOX2a(2)                                                              --------->ARR11(3)                                                          <----------DOF2                                                     <---------ZAT2<---------ICU4        <---------ZAT18                              <---------At4g35610        --------->ZAT14                             <-----------RAV1(1)        <---------ZAT14     --------->YAB1          ===================HOX2a_HOX2a        --------->REM1(2)  <---------YAB1           ------>ZmHOX2a(1)   <---------ANAC58 -------->DOF2           <---------bZIP60(1)      ----------->RAV1(2)   <---------ANAC58 ------>YAB1             --------->bZIP60(1)  <---------DAG2----------->ARR10                -------- ------YAB1              --------->GLK1(1)    <----------DOF2 <---------ARR11(3)------>ZmHOX2a(1)   tcaaagtcagtgtagtctcactatctgatatcatagtctggtaccatgcttttcctgctgctttgatcttcattgccttctcctacaataaacaatgaga  10533700                              <------ZmHOX2a(2)                             --------->AGP1                             <---------ARR11(3)                       --------->ANAC46                       --------->ANAC58                   --------->ANAC55(1)                   --------->ANAC55(2)                   <---------ANAC55(2)                   --------->ANAC58                   --------->ANAC46  --------->GLK1(2)                     --------->ANAC58        --------->AHL20(2)  --------->At4g35610                            --------->ANAC46     --------->YAB1--------->ANAC58 <---------GLK1(2)                      --------->ANAC58        -- ->YAB1 --------->YAB1 --------->ANAC58 <---------YAB1                  --------->TOE1(2)    --------   ttaagaagaataatatcactcacgcaagccagatcaaagattctaatttctaaactcatcaagtctaaacaatccctacgaaacccattatcaacaaaag  10533800      --------->ATHB51      -------->HAHB4                                                         --------->ARR14(2)      <--------ATHB1                                                        <---------GLK1(1)      <---------ICU4                                                        --------->GLK1(1)     <---------ATHB12                                          <---------YAB1<---------ARR14(2)     <---------ATHB51                       --------->YAB1    --------->AHL20(1)     --------->AHL20(2)                    <---------ATHB12   --------->ARR11(3)     --------->ICU4                      --------->WOX13(1)   <---------AHL20(1)     <---------AHL20(2)            <---------YAB1             <---------ARR11(3)              <------ --------->GT1                   --------->YAB1              --------->CCA1(1)         ------>ZmHOX2a(1) -->DOF2                      ---------->DOF2                --------->RVE1(1)   ------>ZmHOX2a(1)   aaggcaaataattgttgatcagatagttccactaaagatgattcaatcatagaaagaattcaaatatctttgaaatgggtttcctcttcctctcgagctt  10533900                                  ---------->DOF2                               ----------->RAV1(1)                             --------->MYB46(3)          <---------MYB59   <---------At4g35610                               <---------ICU4 <---------DAG2       --------->At4g35610                  --------->YAB1  --------->REM1(1) <----------DOF2      <---------At4g35610   ------>ZmHOX2a(1) --------->MYB52(1) ---GLK1(2)   --------->ZAT6--------->At4g35610------>ZmHOX2a(1)      <---------TOE1(3)   <---------GLK1(2)   ctcctttttcgacttaactctctgagcttcagccaacaaagacatcctcctcacagtcttagcataagggttaagcttcaacatcacattcaaattctta  10534000                  <---------ZAT18                  --------->ZAT14                --------->ANAC46                                             --------->YAB1              <---------ALFIN1                                            --------->YAB1       <<<<<<<<<TBF1                                        ------->TEIL --------->AHL20(2)  --------->ARR14(2)                                <---------ALFIN1     <---------AHL20(2)  <---------GLK1(2)                               ------->GAMYB   --------->At4g35610            <---  <---------ARR14(2)            <----------DOF2  --------->MYB46(3)--------->YAB1          --------->YAB1 <------ZmHOX2a(1)<---------ZAT14              <-----------GT1--------->TOE2(3)   ------>ZmHOX2a(1)   agaggattcttcttcaacacagcactcttcacatctttctcaatcggtctaaccacactctgaacctcatcagaattaataatcctagccaaatcagcat  10534100                             --------->AHL20(1)                 ------>ZmHOX2a(2)                                         <---------ATHB12                <------ZmHOX2a(2)                          --------->HSFB2a(2)               <---------AGP1<---------AHL20(2)            <---------HSFB2a(2)               <-----------ARR10         --------->At4g35610             <---------GLK1(1)               --------->ARR11(3)        <---------At4g35610      <---------MYB46(3)               <---------ARR14(2)  <---------YAB1          <---------HSFC1(1) <---------YAB1   ------               <---------ARR11(3)----------->GT1           --------------->AGL15<---------ARR11(3)               --------->ARR14(2)--------->YAB1           <-----------------AGL2--------->ARR11(3)    *TSS       --------->AGP1--------->AHL20(2)    --------->YAB1--------->ALFIN1       --------->AHL20(2)   <-----------GT1          --------->AHL20(2)     --------->AHL20(2)    --------->GLK1(1) <---------ARR14(2) ----TEIL     <---------CCA1(2)<------------CBF --------->YAB1 <-----------RAV1(1)   --------->YAB1 -   tcattttacctagaccagatctaatcccaaaaaaattgtaattagctcattaataatatttctagatgtgggtggaaatcaagataataagaaaatatgg  10534200      <---------ANAC58      <---------ANAC58                     --------->WOX13(1)      <---------ANAC46                   <---------YAB1  <------------CBF             ---------->DOF2     <-----------RAV1(1) ----->GT1         <---------REM1(1)   --------->YAB1        <---------YAB1                         - -------->ICU4  <-----------RAV1(1)   --------->ICU4       --------->YAB1 --------->LBD16          <-   taagaattgtgtgttttcatgttgtagggtcttaaaaggaattatcattcacactgttgtattatgagttattttccgaaaatatacaaaaattagctta  10534300                                                                                --------->LBD16                                                                               --------->LBD16                                                                      ------>ZmHOX2a(1)        ------                                                                    ------>ZmHOX2a(2)      --------->ANAC58                                                                   <------ZmHOX2a(2)       --------->ANAC58          ---------->DOF2       --------->ANAC58                  <---------ARR14(2)  <-----------ARR10 --------->DOF2                 --------->ANAC58            <---------ZAT6<-----------GT1---------->DOF2 --------AHL20(2)            --------->WRKY18(1) ----------->GT1  --------->ARR14(2)  --------->GLK1(2)   tataaagaaaacaaaagagagccgagtcgaggtcaagaaaaacatctaagttagtaattttagagttggatccttttcaccccgagagaatcaaagcaaa  10534400                                                                              <---------LBD16                                                                          --------->ATHB12                                                                         --------->AHL20(2)         <                                       <---------ANAC46           <---------AtLEC2                  <         --------->HSFB2a(1)    <---------YAB1               <---------------AtSPL8                -- ---->DOF2<---------GLK1(2)  --------->ICU4       --------->AHL20(2)     <---------AHL20(2)  <------ZmHOX2a(1)   agaaaattcaaaggttctcaaaacataaaacatgatgaatagcgcatagcaaaaaaataagagattgtacatggattaattggggaatagttttaggaca  10534500                                                                  <---------TOE2(3)                                                               <---------AHL20(2)                                                               <---------YAB1                                                              --------->TOE2(3)              <-------                                                            <---------AHL20(2)               --------                                                            --------->AHL20(2)               --------                                                            <---------AHL20(1)          --------->AHL20(2)                --------->YAB1                              --------->AHL20(1)          <---------AHL20(2)          --------->YAB1                                 <---------AHL20(2)         <---------AHL20(2)          <-----------GT1                                --------->AHL20(1)         --------->AHL20(2) ---------YAB1  >>>>>>>>>RAP2.2                          --------->AHL20(2)        --------->AHL20(2) ---------TOE2(3)              ----------->GT1  ----------->RAV1(1)                <---------AHL20(2) ------->YAB1   --------->TOE2(3)         <-------TEIL--------->YAB1      <---------AHL20(2)---------   ataagattgaaatcacaatctaaattttaaaaatagtcaaaatatacatacaacaaaaataaaatattaatgttattttatggaataaaattaaaaatct  10534600  Previous    Next  AGI:  At2g24730.1    Description:  60S ribosomal protein L4/L1 (RPL4C), pseudogene, blastp match of 68% identity and 7.9e-28 P-value to SP|Q9XF97|RL4_PRUAR 60S ribosomal protein L4 (L1). (Apricot) {Prunus armeniaca} Range:  from: 10533428    to: 10534104    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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