Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------ARR14(2)                     --------->YAB1         --------->ARR14(2)                  <---------ICU4         --------->GLK1(2)        <---------ARR14(2)                       <----------DOF2        <---------GLK1(2)         --------->ARR11(3)                 <---------At4g35610 ---------ANAC46    <---------ARR11(3)   <-----------GT1--------->ANAC58  --------->TOE2(3) ---------ANAC58    --------->ARR11(3)----------->GT1   --------->ANAC58-------->P---------->DOF2 ---------ANAC58---------->DOF2  <---------CCA1(2)    --------->YAB1 --------->At4g35610           --   tggcttggaagaatctgtaaaagattttagtaaacatatctagttactaattagaatcaagacagaaactaagctacctttgaagaaagagtcgtttgat  10505000                                                                                                    <                       --------->ARR11(3)                                                           <                       <---------ARR11(3)                                                      ------                      <---------GLK1(1)                                                  <-------GAMYB                      <---------CCA1(2)                                                 =============         <---------ZAT14                                                                <-----------RAV1(1)         --------->ZAT14        <---------ANAC46            --------->At4g35610     ------>ZmHOX2a(1) ----->TEIL           --------->GLK1(1)<-----------HVH21  <---------WOX13(1)   ------>ZmHOX2a(1) ----   gaacttactagtatacagtctctgatatcttctggtgtgaatgtcacaaatcgattttggattgctgaagacgagtctctcctctcctctctgttgctcc  10505100                                                                                              -------                                                                                              <------      ------>ZmHOX2a(1)                                                                       ------- <---------GLK1(1)                                                                       <---------ANAC58 <----------DOF2                <---------ZAT14                                          <---------ANAC46 ---------ANAC58          <------MYB46(1)                                        <----------DOF2 ---------ANAC58         --------->MYB59      <----------DOF2           <----------DOF2  <---------ANAC58 ----->RAV1(2)     <----------DOF2   --------->GLK1(1)          --------->ZAT14 <---------ANAC46 ======RAV <----------DOF2<------MYB83 <------ZmHOX2a(2)        --------->ZAT18 <---------ANAC58 -->ZmHOX2a(1) <-----------GT1  --------->ZAT14   ---------->ID1<---------ZAT18 <---------ANAC58   --   tggctttcctgttcttttttcctttgctaggtactgcagagatcgactctttctcgctatgttttgagcactctcttttctggcttttatgacttgtgga  10505200           ------>MYB83           --------->MYB52(1)        --------->ANAC46                               <---------DOF5.7(2) <---------ZAT18                    --------------->AGL15 <---------ZAT14         <---------GLK1(1)           --------->DOF5.7(2)                     <------- --------->ZAT14         --------->GLK1(1)         <---------ANAC46                      >>>>>>>>>GATA-1 -->ZAT14  ------>MYB46(1)         <-----------------AGL3                      <---------MYB52(1) ---ZAT14<---------MYB46(2)        ----------------->AGL2                 --------->ANAC46   -------- -->ZAT18<---------MYB111(2)       ----------------->AGL3               ---------->DOF2----------->GT1 ------------->AtSPL8  <------ZmHOX2a(1)    --------->At4g35610    <---------ALFIN1 --------->CCA1(2)   ctgtgtactcaccaaactgagcataggagttccattctccaaaattagctccagcgtgaacgacttgccactcttcaagccgttggatatagataaatct  10505300                                                                              ---------->DOF2                                                                             ------->GAMYB                                                                            --------->MYB46(3)                                                                           --------->ANAC58                                                                           ------>MYB83                                                                           -------->P                                                                           --------->ANAC58       --------->ARR14(2)            <-----------HVH21       <-----------GT1<---------MYB55(2)       <---------ARR14(2)            --------->LBD16      --------------->AtSPL8 --------->ANAC46    --------->WOX13(1)            ------>NtERF2           ------>MYB46(1) --ARR11(3) XXXXXXXXXXXXXXXXXXXXX>MIR402         <---------ANAC58   <----------DOF2         <-------- ->ARR11(3)--------->LBD16------>ZmHOX2a(1)      <---------ANAC58  <---------ICU4    <---------YAB1   ttccagccatttccgagacacatcaatcctctgttttcccgtcgaagagttgcctccaactttgtaccatctttgccaaccaaagttattatcgccaggt  10505400                       <---------DEAR3(2)       --------->ANAC55(2)                     <------NtERF2              <---------ANAC55(2)                   --------->ALFIN1             <---------ANAC55(1)                   ----------->HVH21            <---------ANAC46 --------->ANAC58<---------ANAC58            <---------MYB52(1)              ------------>CBF --------->ANAC46<---------ANAC46           <-------GAMYB               <---------ATHB12     -------- --------->ANAC58<---------ANAC58        <------NtERF2           ----------->GT1             <------- ---RAV1(2)<----------DOF2        <---------MYB52(1)          --------->TOE2(3)         ----------->GT1   tccaagccatttgctcttggggtgtcggtttattcggtttggcctcggttaagtgtttttttttcattagttaaatcatcccaattcaaatggattaaaa  10505500          --------->LBD16         <---------ANAC46         <---------ANAC58         <---------ANAC55(2)         <---------ANAC55(1)         --------->ANAC55(2)               --------->ANAC58  <---------ZAT14         <---------ANAC58                  --------->ANAC46  --------->ZAT14         <---------YAB1      --------->GLK1(2)                    --------->ANAC58  <---------ZAT18      <------NtERF2     <---------GLK1(2)                <----------ID1   ----------->RAV1(1)       ------>NtERF2    --------->HSFB2a(1)           ---------->DOF2   --------->ANAC58          <---------ANAC58    <---------HSFB2a(1)      --------->LBD16  ----------->RAV1(1)             <------MYB83 ->AHL20(2)                 --------->HSFB2a(2)     --------->ANAC58          <------MYB46(1) --AHL20(2)                 <---------HSFB2a(2)   ---------->DOF2             <---------ANAC58 <-----   tttgaaagattccgtgtttccactggttttccagacaaaaggaacaagccacagaagcaccagtgctcaaacaactaatttggtgccatgaatgagtaat  10505600                 --------->TOE2(3)         <---------MYB46(3)        --------->ALFIN1      <---------ANAC46      <-----------RAV1(1)                                                <----------DOF2      <---------ANAC58                                                  <---------ANAC58      <---------ANAC58                                             <---------STY1(2)      --------->ALFIN1                                             --------->STY1(2)  <-------GAMYB  --------->YAB1                              <---------WOX13(1) <---------MYB46(3)          <-----------GT1                <------------CBF               <---------ANAC58 --------->MYB52(2)     --------->TOE2(3)<------------CBF <---------AHL20(2)         <----------DOF2< -------CBF      --------->TOE1(3)    ------>ZmHOX2a(1)<---------ZAT6   <---------ANAC58   <---------ANAC58   tgtttgttgtgtgggtgaaccataaacctttatactattcctctattggctgtctcagagttaattgctatctagctttcgaactgactttaggcttgaa  10505700                                          <---------ATHB12                                        --------->WOX13(1)                                  ------>ZmHOX2a(1) ----------->HVH21               --------->WOX13(1)                                  --------->HSFB2a(2)                             <---------YAB1                               ==============HOX2a_HOX2a                        <---------CCA1(2)                     --------->ANAC46 <------ZmHOX2a(2)             <------ZmHOX2a(2)              <-      ------>ZmHOX2a(1)        ------>ZmHOX2a(1)  <----------DOF2  <---------ARR14(2)             ---     --------->TOE2(3)     --------->ARR14(2)------->TEIL          --------->ARR14(2)          <----- -----------GT1    <---------MYB52(2) ------------>CBF<---------TOE2(3) <---------ALFIN1 <---------At4g35610   tttgactccttaatctctcaaacaaaccacatcctcctcgatcaatgaacctctttgacgttgtgaatcgatcccctcttccatatcattcagataatcc  10505800                                                                                       <---------MYB52(1)                                                                                      --------->LBD16                                                                                     --------->ANAC55(2)                                                                                   ------>ZmHOX2a(2)                                                                               ----------->HVH21                                                                              <-----------HVH21                                                                              --------->LBD16                                                                             <---------O2                                                                             --------->O2                                                                      ----------->RAV1(2)                                                                      <---------ZAT2 <---------ANAC55(2)                                                                      --------->ZAT2 <---------ANAC46                                                        --------->ARR14(2)   --------->bZIP60(2)                                                        <---------ARR14(2)  <---------LBD16   <---------TOE2(3)               >>>>>>>>>>>>>>>>>LFY ------->TEIL  --------->At4g35610  <--------- --------DAG2                ------->GAMYB             <---------CCA1(2) ------>NtERF2<-----------HVH21 ------>ANAC46              <---------ALFIN1      ------->TEIL        <---------At4g35610 --------->bZIP60(1) ----ZAT18         <-----------RAV1(1)       <---------AtLEC2        <-----------RAV1(1)  <---------bZIP60(1)   actctatggtttcagcgttatatgttgccaacacactttccactgttgaatggatgtgtatccctaagtctctgctgccccgtgatcccgtgatgtcaag  10505900  Previous    Next  AGI:  At2g24680.1    Description:  transcriptional factor B3 family protein. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT2G24650.1); similar to reproductive meristem gene 1 [Brassica oleracea var. botrytis] (GB:AAC18082.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 10500966    to: 10505410    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g24683.1    Description:  unknown protein Range:  from: 10505806    to: 10505940    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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