Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->ZAT14                      ---------->DOF2                                                 <---------ZAT14                   <----------ID1                                                     <---------ZAT18                 --------->DAG2           <-------TEIL ------>ZmHOX2a(1)   --------->ANAC58                ---------->DOF2        --------->At4g35610    --------->YAB1 --------->YAB1           --------->ANAC58        --------->MYB52(1) --------->TOE2(3)    --------->ANAC58 --->DOF2  --------->ANAC58   <-----------GT1 <---------MYB52(2)           --------->ANAC46    <-----   gccctaatcacataggcaaaaaggaaaagaatttacaaaacagatgcaactaaaatcctaaaaatcaaaactttcacaagcaaaactgttcactcttcta  10486100                                                                                --------->CCA1(2)                                                                                --------->GLK1(1)                                                                               --------->ARR14(2)                                                                               <---------GLK1(2)<----      <-------TEIL                                                             <---------ARR14(2)   --------->ZAT2   --------->GLK1(2)                                    ----------->HVH21      <----   --------->At4g35610        --------->TOE1(3)                       <---------ARR11(3)    ---------   <---------At4g35610        --------->TOE2(3)   <---------CCA1(2)  <---------CCA1(2)      <--------   <---------ZAT2  <---------GLK1(2)   <------ZmHOX2a(1)             <---------GLK1(2)      --------- ----CCA1(2)    --------->YAB1--------------->AGL15------->TEIL --------->MYB52(1)          <--------   tctccagctacgtccaaatcagaatctaaaaaccctaataaggagcaaacttgaatcttttcaacataccagtatctcacagatttgcagcgagagcact  10486200                                                                                             ------->GAMYB                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                          --------->DEAR3(1)                                                                                          <---------ALFIN1                                                                                          --------->AtMYB61                                                                                         --------->MYB46(3)                                                                                         <---------ABI4(2)                                                                                         <---------MYB55(2)                                                                                        ------>NtERF2                                                                                      --------->MYB46(3)                                                                                      --------->ATERF1(1)                                                                                     <---------ATERF1(1)                                       <---------ANAC46                              ------>NtERF2                                       --------->ETT(1)                             --------->PCF2                                     <-----------HVH21                              --------->ARR14(2)                                     --------->REM1(2)                              <---------ARR14(2)                                    --------->ALFIN1                              --------->LBD16                                    ----------->HVH21                           <---------LBD16 -----DAG2                        <---------ANAC58            <---------AtMYB61 ----------->RAV1(2) ------DOF2                     --------->At4g35610        <---------DEAR3(1)  --------->MYB52(1) >ZAT18                         <---------At4g35610       <------NtERF2       --------->AtMYB61   <-- -ZAT14                   --------->KAN4(1)             <---------DEAR3(1)   <---------MYB55(2)------ >ZAT14                  <---------KAN4(2)          --------->ARR11(3)       --------->MYB46(3)------ -ZAT18        ----------->RAV1(1)<---------ANAC58 <---------GLK1(1)         <---------ABI4(2)-------   ttttggtagtagccttcccacagacagaacattcagccgtgtcggaaaccatgaaatctcggcgatggtctctatcgaaaccaccggagccaccaccgac  10486300      <---------ANAC58      <---------ANAC58 ->DREB2C(2) --MYB111(2) ->DEAR3(1)                                                                               --------->ARR14(2) --->HVH21                                                                                <---------ARR14(2) --MYB46(2)             <-----------GT1                                             <---------GLK1(1) --MYB111(1)        <----------DOF2                                                 --------->GLK1(1) --MYB55(2)     <---------RAP2.6(3)                                          ----------->HVH21 ->DEAR4(1)    <---------ANAC58                                            <---------ANAC46 ->MYB46(3)    <---------ANAC58                                            <---------ANAC58--------->CCA1(2) >DEAR3(2) <---------RAP2.6(2)                                            <-------TEIL   --------->At4g35610 -------HSFB2a(2)<---------MYB52(1)                         ----------->GT1<---------ANAC58<------ZmHOX2a(2) >MYB46(1)--------->At4g35610                      ---------->DOF2     --------->ZAT2    <---------At4g35610 >MYB83   <---------At4g35610           <---------------------WRI1     --------->At4g35610--------->ARR11(3) -->ORA47(1) ------>NtERF2 ---------->DOF2     <----------ID1          <---------At4g35610--------->AGP1   ctcgaagtacttggctgccgttcttttaacaaagtagagaagaccgatagagacaaagaagagcgtcaatataagctgcgtgaaggaattcagatccaca  10486400                                                                                 --------->GLK1(1)                                                                       <-------TEIL                --                                            <------------------------ANAC81      <---------At4g35610-                                        ------>ZmHOX2a(2)             --------->ARR14(1)          ---                                        ======================HOX2a_HOX2a        <---------GLK1(1)---                                      <---------ARR11(3)             --------->ARR14(2)          <---                <---------At4g35610   --------->ARR11(3)             <---------ARR14(2)       -------               ------->TEIL --------->HSFB2a(2)        ------>ZmHOX2a(1)         --------->At4g35610-            --------->AtLEC2<---------HSFB2a(2) <-----------GT1      <---------GLK1(2) ---------->DOF2   aataatccaacttcatgcatctaattccctctcgaacatcgatcttcgtttttcttcctcttctcttctcagattcgattcggagatgccaaagagaatc  10486500                                                                     --------->ARR11(3)    ------>ZmHOX2a(1)                                                <---------ARR11(3)       ------- ------->MYB46(3)                                                 --------->AHL20(2)     <----------DOF2 ------>GAMYB                                                     <---------AHL20(2)    <----------DOF2 ---->TEIL                                                       --------->AHL20(2)     <---------DAG2 ----->P<---------MYB52(1)                                       --------->YAB1       ------>NtERF2 < --------GT1   <----------DOF2    ----------->GT1               <---------ATHB12     <---------PCF2 - -->GLK1(2) <-----------GT1       <---------ZAT6              --------->WOX13(1)  --------->ALFIN1  - -------->AtMYB61                *TSS ---------->DOF2       ------------>CBF    ----------->RAV1(2) <   aacctcctctgttttttctttgctctgtgttttatagagttaaagagagaatgagagaatgggccaattaaaatctttgttcacatggggccttttgggt  10486600                  <--------HAHB4                  -------->ATHB1                 --------->ICU4          --------->ATHB12      <---------YAB1                     <--------HAHB4    <---------ICU4--------->ATHB51      <---------ATHB12    <---------AHL20(2)    <----------DOF2<---------ICU4    --------->AHL20(2) <-----------GT1--------->YAB1                                                -    --------->ATHB51  <-----------GT1 <-----------GT1                                               -   --------->ICU4<---------ATHB51 <---------AHL20(2)              <-----------GT1               <---- ---->GT1    ------------>CBF <---------AHL20(2)             <---------DAG2                  <------- ---------AHL20(2)--------->YAB1 --------->AHL20(2)          <----------DOF2            <---------At5g28300 -------->AHL20(1)<---------ICU4 <---------AHL20(2)       <-----------GT1         <---------AHL20(2)- -------->AHL20(2)<---------AHL20(2)  --------->WOX13(1)<----------DOF2        ----------->GT1 <----- ---------AHL20(1)--------->AHL20(2)<---------YAB1    ---------->ID1 <----------DOF2   <-----------GT1   aattaattatttttggacaattattttcctttttatttattaatcatttgttttttgtctttactttttttctttgtaatttagttaatttacagttatt  10486700                                                         <---------ICU4                                                         --------->ATHB12                                                        --------->ICU4                                                        <---------YAB1                                                      -------->HAHB4                                                      --------->ATHB12                                                     --------->ICU4                                                     <---------ATHB12      <---------MYB111(1)                       --------->TOE2(3)      --------->MYB46(3)           <---------YAB1    <---------YAB1 -------->ANAC58             ----------------->AGL1 <---------TOE2(3) -------->ANAC58           <-----------GT1    <---------TOE1(3)                           --------->AHL20(2) -------GT1       --------->HSFB2a(2)   --------->DAG2<---------ICU4                <-----------GT1 --ICU4           <---------HSFB2a(2)  ---------->DOF2--------->YAB1         <---------ANAC46 -------->ANAC46 <---------LBD16 <---------ICU4 --------->YAB1               <---------ANAC58 ----YAB1      <-----------GT1  --------->ICU4<---------TOE2(3)              <---------ANAC58       -   acaggccaactactatttttctggatttttttccattatgaaaaagttaatgttaatgattattagatactactacattgtgtgatatacaattcaatag  10486800                  ----------->GT1                 --------->DAG2               ---------->DOF2           <---------HSFC1(1)           --------->HSFB2a(2)           --------->HSFC1(1)           <---------------AGL15           <---------HSFB2a(2)           --------------->AGL15          ----------------->AGL3          <-----------------AGL2                     <-------TEIL          <-----------------AG               ----------->GT1              --------->ARR14(2)          <-----------------AGL3         --------->YAB1            <---------YAB1                 ---       <----------DOF2--------->MYB52(2)<---------ATHB12          --------->AHL20(2)    <---------YAB1 -------->ANAC55(2) <--------P        --------->WOX13(1)         --------->YAB1   <---------YAB1  ---   ataagtgttctttctagaaaaggttagtagttttttttggcaatcatatgtaaaatacattgttgaattataatcgaattcactctgattgtgtttgaaa  10486900                                                  <----------DOF2                                           --------->AHL20(2)                           <-------TEIL <---------ICU4     xxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->YAB1    ------------------------>ANAC81  --------->YAB1 ------>TOE1(3)           --------->GLK1(2)--------->YAB1          <---------YAB1                   - ------>TOE2(3)    ---------->DOF2  --------->AHL20(2)        ----------->GT1             <----------DOF2   cctcaaaaaaaaaaaaaaaaaaaaagagattcaatccattaataataatattctttttgtctaatggttaaaattgtatgagtactaccaggctttggac  10487000  Previous    Next  AGI:  At2g24640.1    Description:  ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein. Identical to Ubiquitin carboxyl-terminal hydrolase 19 (UBP19) [Arabidopsis Thaliana] (GB:Q9SJA1;GB:Q9C5D8); similar to ubiquitin carboxyl-terminal hydrolase family protein / zinc finger (MYND type) family protein [Arabidopsis thaliana] (TAIR:AT4G31670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63128.1); contains InterPro domain Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2; (InterPro:IPR001394); contains InterPro domain Zinc finger, MYND-type; (InterPro:IPR002893) Range:  from: 10482507    to: 10486533    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version