Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                    <---------At4g35610                             -                                               --------->CCA1(2)                                    <                                              --------->ARR11(3)                                    <                                              <---------ARR11(3)                       <----------DOF2          --------->ATHB12         ---------->DOF2  --------->At4g35610    --------->MYB52(1)  ------         <---------YAB1         --------->TOE2(3)  <---------TOE1(3)       ---------->DOF2 <---------ANAC58   ------->TEIL              <---------CCA1(2)<-----------ARR10          --------->TOE2(3) <---------ANAC58   agttgaatctcttgattagagtttaagacccaaatctcaaagttggaagatttaagctaaacccatcttgagaaacctaaaggtagcgactttgagtgag  10481200                                                                       <---------ARR11(3)                                                                       --------->ARR11(3)                                                              <---------ARR11(3)                                                        --------->CCA1(2)            <----------DOF2                                                        ===================HOX2a_HOX2a                                                        <------ZmHOX2a(2)          ------>MYB46(1)                                                       --------->ARR14(2)          ------>MYB83                                                       <---------ARR14(2)  ---------->DOF2                                                       --------->AGP1 <---------GLK1(1)             <---------TOE1(3)                         <---------ARR11(3)>>>>>>>>>RAP2.2        ----- -------->ARR14(2)                                 ------->GAMYB      --------->GLK1(1)        ------ -------->ARR11(3)                               -------->P   --------->ARR11(3)  <---------ALFIN1 ---------ARR14(2)                               --------->ANAC58    --------->ARR11(3)      -------- ---------ARR11(3)---------->DOF2                --------->ANAC58    <---------ARR11(3)      -------- ----->GT1  <-----------RAV1(2)                --------->MYB46(3)   <------ZmHOX2a(1)<---------DAG2   taaatcttcagacttcaggttaaagaccaagactttgtaagaaatttgaacaacccagatccaagaactaggatatctaaagacccacttttaaacaaca  10481300                                        --------->TOE1(2)                                        --------->TOE2(2)                                       <---------ANAC58                                       <---------At4g35610                                       --------->At4g35610               <---------At4g35610     <---------ANAC58      --------->At4g35610    <---------YAB1                    --------->ATHB12   ---------->DOF2 ---------->DOF2   --------->ZAT18  --------->ZAT14 -->GAMYB--------->At4g35610 --------->ICU4           <---------ZAT14<---------ANAC46 --->MYB46(3)  --------->At4g35610<---------ICU4    <---------ZAT14<---------MYB46(3)          <----- ->MYB52(1)----------->RAV1(1)    --------->YAB1  <---------------AtSPL8                    --------- --->RAV1(1) --------->MYB46(3)--------->YAB1     <---------------AtSPL3             ----------->GT1   gacagagaagcagcaacagctcaaaggggtcattaatagtgacctgcgagagagagtacagacaatgagtggtttgggcaagtgagagagagaaaagatt  10481400                                                                           <----------DOF2                                                                  ==================================HOX2a_HOX2a                                                                 ===================================HOX2a_HOX2a                                                                --------->ARR11(3)                                                                <---------ARR11(3)                                                  ---------->DOF2<------ZmHOX2a(2)                                          ---------->DOF2       --------->ARR14(2)                  < <---------ANAC58   ---------->DOF2  ===================================HOX2a_HOX2a                <- <---------ANAC58 --------->CCA1(2)  <------ZmHOX2a(1)          <---------ARR14(2)                 -- ----WOX13(1)  ----------->GT1       ====================================HOX2a_HOX2a         ------>ZmHOX2a(1) >ICU4         <---------ZAT6      ------------------------>ANAC81------>ZmHOX2a(2)      <-----------GT1   gatacttggcaatggtagagataaaagagagagagaagaggaagaaaagaatcaaagaagttgtaagatcccttacactttcatgtgaatgtttcctctt  10481500            --------->YAB1            <--------ATHB1            <---------ICU4            --------->ATHB12           --------->ICU4           <---------ATHB12     ------->GAMYB   -------->P ---------MYB52(2)                 <---------CCA1(2) ---------->DOF2              *TSS     <---------DAG2 --------At4g35610              <-------TEIL     ---------->DOF2        ------->TEIL       <--------- ------->At4g35610  --------->REM1(1)  <----------DOF2   --------->TOE1(3)     <---------YAB1   cagctaaccctcaatgatggcttcaacatccaaattcatctcttttttccaaaaagaaagcttaacatttcatgaatctttctcatagagtagctttttt  10481600                                                                                   <---------YAB1                                 ---------->DOF2                                  <---------AHL20(2)                               <------ZmHOX2a(1)                                 --------->YAB1    ==               ---------->DOF2<----------ID1     ----------->GT1                <---------YAB1     <-       <----------DOF2   ---------->DOF2<---------ATHB12                   --------->At4g35610     -- -DOF2 <---------DAG2 ----------->GT1   ------------>CBF                   <---------At4g35610    ---   gaaaaacaacttttagagaaaggctagtaaagaggaaaagaaatcaatggatagaaaaattcaaaatggtagtgactagctgattataatgggctagtaa  10481700                                                             ----------->GT1                                                            <---------TOE2(3)                                                          --------->ATHB51                                                          --------->YAB1                                                          <---------ICU4                                                         <---------ATHB12                                                         --------->ICU4                                                      <---------------AGL15                                                      --------------->AGL15            --------->ANAC58                    <---------ARR14(2)            --------->ANAC58   <---------ANAC58 <---------ARR11(3)                 --------->ANAC58         <-------TEIL--------->ANAC58           --------->ARR11(3)      --------->ARR11(3)     <---------------AtSPL8  <-----------GT1    --------->ARR14(3)      <---------ARR11(3)  ---------->DOF2  ---------->DOF2              <---------ARR14(3)      --------->GLK1(2) =====================================================================MADS_MADS    --------->ANAC46 --------------AGL15 --------->ANAC58         ----------->ARR10        --------->RVE1(1) ------------->AGL15 --------->ANAC46     --------->YAB1 <---------ATHB51          --------->ANAC58 ------>TOE2(3)<----------DOF2 <---------ANAC58 <---------GLK1(2)    --------->AHL20(2)        <-----   tctaaaaagggtacaagctttaaaagcaattttacttgaacttataagaagattttgcaattatggaaaaaaaaaatctagttataggcaattgcattta  10481800                   --------->At4g35610                   <---------At4g35610           --------->ZAT6            <---------ALFIN1            <---------AHL20(2)                 <-----------GT1            <------NtERF2        ------      <-----------GT1                       --------->TOE2(3)        --------->DAG2  ---------->DOF2 ----AHL20(2)     ------->TEIL        <-----------GT1              ---------->DOF2<---------ANAC55(2)   atctctgtttacattttatgtagctgataaacacacatattcacaaacttaactcttcatcaaatgggcaaaaggccccaaatcacataaagagataaca  10481900                                                                    --------->ATHB12                          --------->KAN4(2)                        <---------YAB1                         <---------ICU4                        <---------WOX13(1)                        <---------YAB1                      <---------YAB1   --------->ARR11(3)                       <---------ARR11(3)               --------->WOX13(1)   <---------ARR11(3)     <                       --------->ARR11(3)            <-----------TGA1 <---------WOX13(1)            -                      --------->YAB1               ---------->ID1  --------->ICU4                   -                     <---------YAB1               <-----------GT1 <---------TOE2(3)              <--- --->MYB46(3)        --------->ICU4            <---------AHL20(2)--------->YAB1          --------->CCA1(2)   aacaaatatgtgtattatcgaccatgatcattctacttggaaaacatatttttttcgtcattcagattgatgattgaaagatttagttaagagacgatat  10482000                                --------->LBD16                                ------>NtERF2                               <---------ANAC46       <---------MYB52(1)     <---------LBD16 ---------DAG2               <---------At5g28300 -------->TOE2(3)     ------->TEIL<----------DOF2                                                 --- -------->TOE1(3)    <---------AtLEC2           <-----------GT1    ----------->GT1   <---------YAB1 --------GT1       <---------YAB1<---------ANAC46       ---------->DOF2   <---------TOE2(3)    <-----   aaccttaccgtttcgctcattatgcatgttttgccgcgtttattttgtttctactattcaaagtcttaatagttataagattgaattagtattggtatta  10482100  Previous    Next  AGI:  At2g24630.1    Description:  ATCSLC08 (Cellulose synthase-like C8); transferase, transferring glycosyl groups. similar to ATCSLC12 (Cellulose synthase-like C12), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G07960.1); similar to ATCSLC04 (CELLULOSE-SYNTHASE LIKE C 4), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G28180.1); similar to ATCSLC05 (Cellulose synthase-like C5), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT4G31590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23196.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78456.1); similar to hypothetical pr Range:  from: 10478382    to: 10481582    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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