Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   ===============================HOX2a_HOX2a                                 <------ZmHOX2a(2)                                --------->ARR14(2)                                <---------ARR14(2)                          <---------HSFC1(2)                          --------->HSFC1(2)                          --------->HSFB2a(1)                --------->LBD16                          <---------HSFB2a(1)               --------->LBD16                    --------->LBD16                         --------->HSFB2a(2)                   <---------ANAC58                        <---------LBD16                          < --------->YAB1    <---------ANAC46            --------->ARR14(2)                          --------->TOE2(3) --MYB46(1)        <---------ANAC58         --------->LBD16--------->HSFB2a(2)          --------->ARR14(2) --MYB83         xxxxxxxxxxxxxxxx>smallRNA(i)  <---------ARR14(2)      <---------LBD16  <---------ARR14(2) ----MYB46(3)   <---------ARR14(2)         <---------LBD16 <---------HSFB2a(2)          --------->GLK1(2) ---ANAC46      --------->ARR14(2)        <---------LBD16------>ZmHOX2a(1) <---------ARR14(2)       =   gtttgataatcccaccaagttccgtcgaaactccgatccaattctccgggatactaatcctcccggagaaatgctcggaaactgcatgagaatccataac  10452900                                 --------->MYB52(1)                         ------->MYC3                         <-------PIF5                         -------->ABF1                         <-------MYC2                         ------->MYC2                         <-------MYC3                         ------->PIF5                         ------->MYC4                         <-------MYC4                        --------->TGA1a                        --------->ARR14(2)                        <---------TGA1a                        <---------TCP20                        <---------O2                         --------->LBD16                        <---------ANAC55(2)                  ----------->HVH21                        --------->ANAC55(2)                  <---------SPL7                        <---------bZIP60(2)             ------>ZmHOX2a(2)                        >>>>>>>>>>ABI5                 <---------At4g35610                        >>>>>>>>>>AtMYC2               --------->At4g35610                        --------->O2              --------->At4g35610                        ====================MYC_MYB   <---------ARR14(2)                    ----------------->PIF3(1)     <---------At4g35610            --------->LBD16  ----------------->AGL1   --------->ARR14(2)           XXXXXXXXXXXXXXXXXXXX>MIR826        --------->GLK1(2)--------->PCF2    --------->At4g35610 >>>>>>>>>>HY5     =====================HOX2a_HOX2a                      <---- ----------CDC5    ----------->HVH21------->GAMYB <---------ZAT2                              ------- =================================MYC_MYB <------ZmHOX2a(1)<---------LBD16          ----------->GT1 <   ccgatgagctagcccgtgtttttgacacgtggccacaacggagaggagactctgctgatctgccggacccatgtcgaattgttgagttggaaaatgaact  10453000                                 ------->GAMYB                              <---------ARR14(2)                        ------>NtERF2                        <---------At4g35610                       --------->DEAR3(1)                                                    --------                      <------NtERF2                                                          <-------                      <---------ALFIN1                                                       <-------                      --------->ATERF1(1)                                           --------->ANAC58                     <---------ATERF1(1)                                            <---------ANAC55(2)                     --------->At4g35610                                            --------->ANAC58                     --------->LBD16                                                --------->ANAC55(2)                     <---------At4g35610                                          <---------ANAC46                    --------->DEAR3(1)                                      --------->MYB111(1)------                    --------->RAP2.3(2)                                    <--------P        <-------          --------->TOE2(1)   --------->ARR14(2)                        --------->LBD16      <------- ------DOF2        --------->RAP2.3(1)--------->ZAT18                  <---------ANAC46     <-------TEIL >TEIL    --------->TOE1(1)   --------->MYB52(1)                      <---------LBD16      <---------ANAC46 ---------CCA1(2) --------->At4g35610 <---------ZAT18                ------>ZmHOX2a(1)  <-----------RAV1(1)   ttgtatccaatctcggactgagccgcagcccataaccgagtcgactcggaaaccatggagtagtagtaatcctccgggtaagtggcacgtatggtgcgtg  10453100                                                                                           <---------ZAT2                                                                                           <---------At4g35610                                                                                           --------->At4g35610                                                                                           --------->ZAT2                                                                                           <---------HSFB2a(1)                                                                                           --------->HSFC1(2)                                                                                           <---------HSFC1(2)                                                                                           --------->HSFB2a(1)                                                                                          --------->ARR14(2)                                                                                          <----------                                                                                        --------->LBD16                                                                                       --------->ALFIN1                                                                                       <---------DEAR3(1)                                                                                      <------NtERF2                                                                                      --------->ATERF1(1)                                                                                      <---------LBD16                                                                                      ------>NtERF2                                                                                    --------->ANAC46                                                                                    <---------DEAR3(1)                                                                           ----------->RAV1(2)                                                                           --------->At4g35610                                                                           <---------ZAT2 <---------ARR14(2)                                                                           <---------At4g35610                                                                           --------->ZAT2<------NtERF2    --------->LBD16                                                       ------>NtERF2<---------ANAC46    <-----------HVH21                                                    <---------ATERF1(2)   <---------ANAC46                                                      <-----------RAV1(2) ->ANAC55(2)                                                          <-----------GT1<---------ATERF1(1) --ANAC55(2)                                                      <----------DOF2  <---------LBD16 --ANAC58                     --------->GLK1(1)          <---------At4g35610      --------->ANAC46 ----->HVH21                <------ZmHOX2a(1)            --------->At4g35610   --------->ARR14(2) --ANAC46           --------->ALFIN1                     ----------->RAV1(2)   <---------ARR14(2) --ANAC58          --------->At5g28300          ---------->DOF2   <---------DAG2--------->CCA1(2)  <-   actcgccgtgagaagagccacggtgatggaggaaatcgaattgctctaacaaaagagtcttctggcctctttttgccagctgatacgcggcggagcttcc  10453200                                              <---------HSFB2a(1)                                              <---------KAN4(1)                                              --------->HSFC1(2)                                              --------->HSFB2a(1)                                              --------->KAN4(1)                                             ---------->TaMYB80                                     <------NtERF2                                     --------->ATERF1(1)                                    <-----------HVH21                              --------->HSFB2a(1)                             <---------ARR11(1)                             <---------ARR14(2)                             --------->ARR14(2)--------->KAN4(2)                             <-----------ARR10<---------HSFC1(2)                             --------->GLK1(2)<----------TaMYB80                                    <                       --------->O2 <---------RAP2.6(3)                                            <-                       <---------O2<---------ANAC46                                              <---                       --------->TGA1a  <------NtERF2                      <------MYB46(1)     ------               ==================MYC_MYB<---------------------WRI1      <---------ANAC58     <-------               ------->GAMYB ------->TEIL    <---------KAN4(2)          <---------ANAC58     <-------      ------>ZmHOX2a(1)<---------TGA1a<---------DEAR3(1)                <---------ANAC46     <-------    ----------->RAV1(2)===================================================bZIP_DOF<---------YAB1 ---- -ARR10       --------->MYB46(3)   --------->DEAR3(1)          ---------->DOF2   <---------TOE2(3)<-- --------CCA1(2)  --------->WOX13(1)------>NtERF2        <------ZmHOX2a(1) <------MYB83<---------HSFB2a(2)   cataactcctgctccaacgacaatcacgtcgaatctgccgtcgtcggaatattccatgaggaagtgaaagagaggcttggtttgatgtttgagaagcgtg  10453300    <---------MYB46(3)  <-------GAMYB <---------MYB46(3) --------->MYB111(2) --------->MYB55(2) --------P ------GAMYB                                                                                        < ------AtMYB61                                                                                     <- --->ALFIN1                                                                                      ---- --ANAC46                                                                                    <------- --ANAC58                                    <-----------TBP                                 -------- --ANAC58            *TSS             --------->YAB1                                       --------->YAB1 ----->ALFIN1  <----------DOF2       <---------YAB1                 <----------ID1      --------->YAB1 -------MYB46(3)   ---------->DOF2--------->ICU4        <---------ZAT6                 <---------AHL20(2)   tggttgttgttgatgctctttaaaagcgactatgaaattatcaaaacatatatagatagtgtttgacaaatggacaaaactccacttatataatcacgag  10453400                                                                 <---------MYB52(1)                                                               ----------->GT1                                                              <---------------------WRI1                                                           --------->SPL7                                                           <-------TEIL                                                           ------->TEIL                                                         --------->TOE1(2)                                                         <---------SPL7                                                         --------->TOE2(2)                                                       <---------TOE2(3)                                                       --------------->AtSPL3                    ----                                                       <---------------AtSPL8                    <---                                                       <---------TOE1(3)                         ----      <------------CBF                           <---------AHL20(1)                              ----  --------->ANAC46                               --------->AHL20(1)            <------NtERF2    ----- -----------GT1   <----------DOF2                --------->AHL20(2)           ----------->GT1   ----- ------TEIL<-----------HVH21<----------DOF2     <---------AHL20(2) --------->MYB52(2)           <---- ----->ARR14(2)--------->ANAC58      <---------ZAT18  <-----------GT1         --------->LBD16   <---- --ANAC55(2)   --------->ANAC58      <---------ZAT14 <-----------GT1        <---------LBD16     <---- ->ANAC55(2)----------->HVH21        --------->ZAT14<---------AHL20(2)<-----------GT1         -------   attcacaacattgtgtcacgctttcttcccctttcttactgaactcttaaatattttaacgtacgtcgttatttactaggcggaaaaacaaaacaaaaat  10453500                                      <---------YAB1                                  <---------AHL20(2)                              --------->AHL20(2)                             <---------ARR11(3) ----->ATHB51                --------->AHL20(1)                                               <------ ------ICU4                  --------->ARR11(3)                                              <------- ----->ATHB12                <---------AHL20(1)                                              -------- ---->ATHB1          --------->AHL20(2)                                  <-----------GT1 <---------YAB1 ---->AHL20(1)      <---------AHL20(2)--------->AHL20(2)          --------->ANAC46       <---------AHL20(2) ---->ICU4          --------->AHL20(2)<---------AHL20(2)         --------->LBD16       --------->YAB1 -----ATHB51--------->ZAT6--------->AHL20(2)                   <---------LBD16     --------->AHL20(2) -----YAB1<-----------GT1--------->YAB1                      --------->ARR14(2)    --------->ATHB51 -----AHL20(2)  --------->AHL20(2)--------->AHL20(2)         --------->GLK1(2)    --------->ICU4 ---- -->YAB1 <-----------GT1--------->AHL20(2)  <---------TOE2(3)<---------ARR14(2)   <---------YAB1<----   tattgtattatttaacacttaaataaataaaaatatttatattattaagttatttgtaagaaaaatccgcgaaattaacatctcattatttataatttat  10453600                                               ------>MYB46(1)                                               ------>MYB83        --------->ANAC58                      <---------------AGL15                    <---------AHL20(2)        --------->ANAC58                     <-----------------AGL3 ------>MYB46(1) <---------AHL20(2)      <---------AtLEC2                       <---------MYB59        ------>MYB83    <---------ICU4 -----GT1                             ------>MYB46(1)             <---------MYB111(1)  <---------ICU4 --AHL20(2)                           ------>MYB83             --------->AtMYB61   --------->AHL20(2) ->AHL20(2)           --------->GLK1(2)   <-----------GT1    -------->P          --------->YAB1 ----->YAB1    --------->TOE1(3)    <---------MYB59 <---------TOE2(3)      --------->TOE2(3) -----YAB1     --------->TOE2(3)  -------->P --------->TOE2(3)--------->MYB46(3)<---------AHL20(2)   catattttgcaagtaaacctcaaaattctggctatctaccaaataaacctaattttggttatctaccaccaaataagcctaaataataaatatttctcta  10453700                                                                            <---------TOE1(2)                                                                            <---------TOE2(2)                                                                           <---------MYB52(1)                                                                         <---------ANAC58                                                                         <---------ANAC55(2)                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                --------->ARR14(2)                 --                                                                --------->KAN4(2)                  <-                                                               <----------TaMYB80                 ---                                                               <---------HSFB2a(1)                ---                                                               <---------KAN4(1)                  <--                                                               --------->KAN4(1)                  <--                              --------->AHL20(2)               <---------HSFC1(2)            --------                  <-------GAMYB<---------AHL20(2)              --------->HSFB2a(1)   --------->ZAT18                  <---------ANAC46             --------->TOE2(3)<---------ARR14(2)   <---------ZAT18                  <---------ANAC58          <-----------GT1   <---------KAN4(2)   <---------ANAC46===                  <---------ANAC58         <-----------GT1    ---------->TaMYB80<---------ZAT14   <--   gcacaaaaactttgggacttggttgtaaatgattttatatgttttttaacctttgtaactatggaatattcgatttcgtaagtttagtgggcaactttgt  10453800  Previous    Next  AGI:  At2g24580.1    Description:  sarcosine oxidase family protein. Identical to Probable sarcosine oxidase [Arabidopsis Thaliana] (GB:Q9SJA7); similar to unnamed protein product [Vitis vinifera] (GB:CAO63139.1); contains InterPro domain Sarcosine oxidase, monomeric; (InterPro:IPR006281); contains InterPro domain FAD dependent oxidoreductase; (InterPro:IPR006076) Range:  from: 10451869    to: 10453321    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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