Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <------NtERF2                                                                         --------->ATERF1(1)                                                                        <---------ATERF1(1)                                                                        ------>NtERF2                                                                       --------->DEAR3(1)                                                                       <---------DEAR3(1)                                                                  --------->MYB52(1)                                                               --------->ANAC58                                                               --------->ANAC46               ------>ZmHOX2a(1)           <------ZmHOX2a(1)                          ------>ZmHOX2a(1)<---------ANAC46    ------>ZmHOX2a(1)   <---------ANAC55(2)                            ----------------------->TaNAC69(2) <<<<<<<<<TBF1   --------->ANAC55(2)               --------->MYB52(1)        --------->ANAC58   <<<<<<<<<TBF1   aacttacttaataggaagagagtcttcaagagaagaactaaacgaatcaagtgttcctcgttggcacgaaacggcgtcgtcttcttcttcttcctcctcg  10435900                                             <---------ATERF1(1)                                             --------->LBD16    <-----------GT1                                             ------>NtERF2   <---------ICU4                                            <---------DEAR3(1) <---------YAB1                   =====                                           <---------LBD16  --------->ICU4                      -----                                          ------>ZmHOX2a(1) <---------YAB1              =============                                     <---------ARR14(2)   --------->YAB1                <------ZmHOX2a(2)                                     --------->KAN4(2)    <---------ICU4               <---------ARR14(2)                                     <---------GLK1(2)   --------->ICU4                --------->ARR14(2)                                    --------->HSFB2a(1)  <---------YAB1  =======================HOX2a_HOX2a                                    <---------HSFC1(2) <---------ICU4    ============================                                    <---------HSFB2a(1)--------->YAB1    ======================HOX2a_HOX2a                                 --------->LBD16      --------->ICU4     ------>ZmHOX2a(1)      -----                             --------->MYB52(1) ------>NtERF2--------->YAB1          --------->LBD16<       <----------DOF2     --------->HSFB2a(1) --------->DEAR3(1)       --------->TOE2(3)============ <-----------GT1    <----------ID1  --------->HSFC1(2)<---------YAB1    --------->TOE1(3)------>ZmHOX2a(2)   ttttcactgctttctccgatagacgacgaactatccgaagattcctccggcgacttattattattattactcatccttaatccaatcccgatctgtgatc  10436000                                                                                       <------NtERF2                                                                                      <---------RAP2.6(3)                                                                                      ------>NtERF2                                                                                     --------->RRTF1(3)                                                                                     --------->RRTF1(2)                                                                                     --------->DEAR3(1)                                                                                     --------->RAP2.6(2)                                                                                     --------->RAP2.3(2)                                                                                     --------->DREB2C(2)                                                                                     --------->RAP2.3(3)                                                                                     --------->ANAC46                                                                                    --------->ERF1                                                                                    --------->RRTF1(1)                                                                                    --------->RAP2.3(1)                                                                                    --------->ORA47(2)                                                                                   <---------ATERF1(1)           <-------TEIL                                                           --------->ANAC46       <---------YAB1                                                             --------->ANAC58       --------->ICU4                                                             --------->ANAC58       ------>ZmHOX2a(1)                                                         --------->SPL7   ------->PIF5                                        --------->DEAR3(1)        ------->TEIL   <-------PIF5                                        --------->RAP2.3(3)       <-------TEIL  --------->ANAC58                                    --------->RAP2.3(1)      --------->TOE1(2)  --------->ANAC58                                    <------NtERF2            <---------SPL7  --------->ANAC46                                =============================HOX2a_HOX2a  --------->bZIP60(2)                             ------>ZmHOX2a(1)           <---------ANAC58 =============HOX2a_HOX2a                        --------->TOE2(2)            <---------ANAC58 ->ZmHOX2a(2)                                    --------->TOE1(2)           --------------->AtSPL3 =============HOX2a_HOX2a                       ----------->RAV1(2)     ------>ZmHOX2a(2) ==HOX2a_HOX2a--------->At4g35610          <---------DAG2             <---------ARR11(3) ---->MYB46(3)<---------At4g35610          --------->TOE2(3)    --------->LBD16--------->TOE2(2) ---------ALFIN1                       --------->MYB46(3)   <---------ALFIN1 <---------TOE2(3) <----- =============HOX2a_HOX2a        <---------MYB52(1)  ------>NtERF2    --------->ARR11(3)  --------->AtLEC2   caccacgtcctgattcatcagccaagaacagagccgtttgaacagccttatcctgcgccgaaacaccgcgatgatctctaacgtacgccgccatgccgat  10436100                  <---------ARR14(2)                  --------->ARR14(2)               --------->TOE2(3)               --------->YAB1               --------->TOE1(3)               --------->AtMYB61              --------->MYB46(3)              <---------ATHB12             ------>MYB46(1)             ------>MYB83                                     ----------->GT1                       -           --------->AtMYB61                                <---------ANAC58         --------->At4g35610           <---------MYB111(1)                     <----------DOF2                 <-----------RAV1(2)          <---------MYB55(2)                   <------ZmHOX2a(2)          --------->ANAC46          <          --------->DEAR3(2)                   --------->GLK1(1)     --------->KAN4(2)        -------          --------->MYB46(3)     <----------DOF2------>ZmHOX2a(2)    --------->ARR14(2)   <---------YAB1         ------->TEIL--------->TOE2(3)        <---------ARR11(3)     <---------ARR14(2)  <---------ARR11(3)      <---------MYB52(2)         <---------DAG2<---------GLK1(1)    <----------TaMYB80   --------->ARR11(3)     <-----------------------TaNAC69(2)       --------->ARR11(3)   ---------->TaMYB80<---------At4g35610 ----ARR14(2)-------->P       <-----------GT1 <---------AGP1<---------ANAC58---------->DOF2--------->YAB1   tccaaacgacgaaccaaccataacctccatataaacttttccgattaagatctctttctctagcctgtgaatatacccgaaagactcagatgatcataaa  10436200              <---------AtMYB61           <---------ANAC58           <---------ANAC58   <------NtERF2  ------>NtERF2<------MYB83  --------->LBD16                              --------->CCA1(2)  <---------ATERF1(1)                         --------->ARR11(3) --------->DEAR3(1)                  <---------TOE1(2) --------->ATERF1(2)                 <---------TOE2(2) <---------DEAR3(1)                 <-----------RAV1(2)            ---------->DOF2 <---------ATERF1(2)     <----------DOF2      >>>>>>>>>>GT-1 --------->CCA1(2) -------->ATERF1(1)   --------->ARR11(3)     --------->YAB1 <---------ARR11(3)                ------- ---------LBD16<------MYB46(1)--------->MYB46(3)    <------ZmHOX2a(1)    ----------->GT1    --------- --->DOF2 <-------TEIL<---------ARR11(3)   <---------TOE2(3)--------->ARR11(3)  --------->AtLEC2   --   tcgccggcgatgtgcgtaggtgaagagctttaaccagcgcaggttaatgatataggaagagagatatacaaaagaaggtgaaatgcaaaacaacactgaa  10436300                                                             <---------ANAC58                                                             --------->ANAC55(2)            <--------                                                             <---------ANAC55(1)         --------->ICU4                                                             <---------ANAC55(2)       ------->TEIL                                                 --------->AHL20(2)                 <---------ANAC55(2)                  <---------YAB1                 <---------AHL20(2)                 --------->ANAC55(1)            <---------AHL20(2)                 ----------->TBP                      --------->ANAC55(2)            --------->AHL20(2)             ----------->GT1   <---------ANAC58       --------->ANAC46 *TSS  ----------->GT1       --------->YAB1<---------ANAC46  <---------ANAC46     <-----------GT1 -->ZAT14   --------->AHL20(1)           <---------ARR11(3) <-----------------------TaNAC69(2) >ANAC46    <---------AHL20(1)      ------------>CBF   <---------YAB1         <-----------TBP     <-- --------->GT1<---------GLK1(2)   <----------ID1--------->YAB1  <------------CBF<---------AHL20(2)---   cgagaaaaatggaataaattctcatttacatttataacgacaatatcgtataaaaatacgattacgtattgaatacgaatatttatacgtatttatgagt  10436400                                                                                 --------->REM1(2)                                                                                --------->ALFIN1                                                                              <---------ANAC46                                                                              <---------ANAC58                                                                              --------->TGA1a                                                                              <---------O2                                                    --------->WRKY12          <---------TGA1a              <---------------AGL15               <----------DOF2             <---------bZIP60(2)              --------------->AGL15            ------>NtERF2                  --------->O2              ------>ZmHOX2a(1)               --------->DEAR3(1)              <---------ANAC58             ----------------->AGL3         ------->GAMYB                     =======================             ----------------->AGL2         ============================================MYC_MYB             <-----------------AGL2      <---------DOF5.7(2)                <---------TGA2(2)             <-----------------AGL3      --------->MYB52(1)                ----------->HVH21             --------->TOE2(3)         --------->DOF5.7(2)                 ----------->TGA1       ------->MYC3                  --------->ANAC58             --------->ANAC58         --------->ATHB12 -YAB1 <-------MYC3                  --------->ANAC58             --------->ANAC58        <---------YAB1 -------HSFB2a(2)                   --------->ZAT18 ----------->HVH21    <---------At4g35610 ------>HSFB2a(2)              ------>ZmHOX2a(1)  ======================================bZIP_DOF   ctggaaacacatgttcctaaatatagaatagtcctaggcacgctaacggcgactttgacggtatagacacggtcttgctgacgtggagagttttcattgg  10436500                                                                              <---------MYB46(3)                                                                           <---------ANAC46                         <---------ANAC58                                  <------MYB46(1)                         <---------ANAC46                                  <------MYB83        ------                     --------->HSFC1(2)                                   --------->MYB46(2)   <-----                     <---------HSFC1(2)                               --------->HSFC1(2)       <-----                 <---------SPL7                                       <---------HSFB2a(1)--------->ANAC58                 --------->LBD16                                      <---------HSFC1(2) --------->ANAC58                 ----------->HVH21                                    --------->HSFB2a(1)--------->ANAC46               <---------LBD16                                <---------SPL7<---------MYB52(1) <-----          <----------DOF2<---------ANAC58                   <---------------AtSPL3     --------->YAB1 <---------TOE2(3) --------->SPL7                     ------->TEIL  ---------->DOF2  <-----------HVH21 ====================bZIP_DOF<--------P  <---------MYB52(1)<-------GAMYB  <---------DEAR3(1)  <------   tttaagtttggacttttgccggacgtttcgggttactgtctccgtttaatccgatgtatgtcgttgtaccgaaagttcggtggtcactatcacaccatat  10436600                                                                                --------->GLK1(2)                                                                                --------->ARR11(3)   <---------DAG2                                                               <---------ARR11(3)   --------->TOE1(3)                                                           --------->RVE1(1)   --------->TOE2(3)                                                           --------->CCA1(1) --->ARR14(2)                                                          ----------->GT1 ----ARR11(3)       <---------YAB1<---------AHL20(2) --------->HSFB2a(2)<----------ID1 ------ARR10 --------->AHL20(2)   --------->AHL20(2) <---------HSFB2a(2)----------->GT1  ----------->GT1 ----ARR11(1)--------->YAB1 ---------->ID1     --------->ARR11(3)    --------->DAG2  --------->ATHB12 ---CCA1(2)  <---------AHL20(2) <----------DOF2<---------ARR11(3)   ---------->DOF2 <---------YAB1   ctcaaccttatccatttatattttgattttgtttctttaaatgttttaagatgttttagaaatatgtggaaaaagggaaaaaaatcttgattagttatat  10436700                                                                                           --------->ATHB12                                                                                          <---------YAB1                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                <XXXXXXXXXXXXXXXXXXXXMIR852                         <---------ANAC58                          --------->ANAC58                                     <---------ARR11(3)                      <------MYB83                                             <---------AHL20(1)                      <------MYB46(1)     <XXXXXXXXXXXXXXXXXXXMIR156A-F        --------->ARR11(3) <--                     --------->MYB59  --------->ARR11(3)                       --------->AHL20(1) <--           ----------->GT1--------->ANAC58<---------YAB1                      --------->YAB1   <-----   caattcaattggatggataatatttggtatgcaaaattaagatgctgatttttttctgttaataagtcaaaagattacaaaaatattcgtgtatgattta  10436800  Previous    Next  AGI:  At2g24550.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31510.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96563.1) Range:  from: 10434936    to: 10436301    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version