Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------GLK1(1)                           <---------ANAC46 --------->TOE2(3)                             <----------DOF2                         ------->TEIL ------>ZmHOX2a(1)             ---------->DOF2--------->REM1(1)                 <---------At4g35610----------->RAV1(2)<---------GLK1(2)   <---------DEAR3(1)<------- --ICU4     --------->ARR11(3)   --------->GLK1(1)<-----------GT1--------->YAB1<---------MYB46(3)   actcttcgacttaagatgctgctcatgagccttggaactcctgtaacctttgttacagattccacaactataaagcatcggtgcttcaacagctttaacc  10409600                                                                                            ---------                                                            --------->At4g35610             <--------                                                            --------->ZAT2                 <---------ATHB12                <---------ANAC58                    <------ZmHOX2a(1)                ------>MYB83                <---------ANAC58                  --------->LBD16       <---------ICU4     --------->ICU4               --------->ZAT2                    <---------LBD16      <-----------GT1------>MYB46(1) ----GT1       <---------ZAT2              <---------MYB52(1)        --------->YAB1<---------MYB59   ttctcttgagctatagcagcttgtctagcttcaaatagtgcctctgttactccaggaacaccagctatctataaacatttcaaaaccaaactaatcatga  10409700                                                                                                    -                                    ------->TEIL  --------->ANAC58                                  - >YAB1                     --------->TOE2(3)      --------->ANAC58                            <------ -ICU4              --------->TOE2(3)        --------->ANAC46             <-----------GT1     -------   actagaagaaccaaaatcaaatccataaaccatagacgaacttaatcgcgaaacgaaaacacaagagattgaattctaaccttgcgcttgagattgtaac  10409800                                                                                <---------ARR11(3)          --------->GLK1(1)                                        --------->ANAC46         --------->ARR14(2)                                        --------->ANAC58 <------NtERF2                  --------->At4g35610            <-----------GT1  --------->ARR11(3) ----->NtERF2                 ---------->CDC5             --------->ANAC58    <<<<<<<GRF7 -------->ABI4(2)          --------->At4g35610            --------->ANAC46  ----------->HVH21 -----GT1<---------ARR14(2)<---------At4g35610   <----------DOF2   --------->ANAC58<----------DOF2 -->MYB52(1)     <---------ZAT6 <---------At4g35610       --------->ANAC58----------->RAV1(2)       -   ggtgccattcggatttgtagtgaaacttctgctcagcgtcgtcttcgaagtctttgttacacgaattacaagctaaacctgacatctttctctatctcag  10409900                                                                         <------MYB83                                                              <---------At4g35610                                                             <---------DEAR3(2)                                                             ------>NtERF2                                                            <---------DEAR3(1)                                                            <---------RAP2.3(2)                                                           <------NtERF2 <------MYB46(1)                                                           --------->ATERF1(1)                                                          ------>NtERF2 <---------AtMYB61                                                         <---------DEAR3(1)                                                         --------->DEAR3(1)                                         <---------AtMYB61<---------ATERF1(1) <------NtERF2                                       <----------DOF2   ----------->HVH21   <---------ORA47(2)                                      <---------ANAC58  <------NtERF2--------->ANAC46      <---------                                      <---------ANAC58  --------->ATERF1(1) <---------DEAR4(1)     --                          <------ZmHOX2a(1)             --------->RAP2.3(1) <---------DEAR3(1)     <- -------->YAB1<------ZmHOX2a(1)<---------TOE2(3)       <---------ATERF1(1) <---------ORA47(1)<-------   aataaaaactcagagaggaagaattcgaggattagggatggctttggtttatattggaggcgacggctcatacgtaggtcggcgaaatttgtttaacgac  10410000                      --------->ANAC55(2)                      <---------ANAC58                <---------ANAC46                <---------YAB1              *TSS    <---------ANAC46       --------->ARR11(3)                                               --------->ANAC58       <---------ARR11(1)                                    <----------DOF2       <---------ARR14(2)                                   <---------ANAC58       --------->ARR14(2)         ----------->GT1           <---------ANAC58           ----------->GT1 --GT1<---------CCA1(2)   --------->ANAC58            <---------YAB1    --------->ANAC58 ------->ARR14(2)     <---------ANAC58           ----------->GT1        --------->ANAC46        <---- --------ARR14(2)     <---------ANAC55(2)      <---------ANAC46       --------->MYB52(1)   --------->AHL20(2) ---ID1<---------ARR11(3) --------->ANAC58   <-----------HVH21   ---------->ID1 --------->AHL20(2)   aaatctccaaatcttgttgtgtttgcgtaagcagtgatgttaatatgggtcgggttaagatggctttggcccaaacgaaattttaaatcgggttaaaata  10410100                                                                                        --------->ANAC55(1)                                                                                        --------->ANAC46                                                                                        --------->ANAC58                                                                                        --------->ANAC55(2)                                                                           <---------YAB1                                                                          --------->AHL20(2)    <----                                                                         <---------ICU4 --------->ANAC58                  <----------DOF2                                  --------->TOE2(3) <---------ARR14(2)           --------->MYB52(1)                                      --------->TOE1(3) --------->ARR14(2) ---TEIL<---------At4g35610   <----------DOF2          --------->YAB1   --------->ICU4  <---------ANAC55(2)   cattttgtgaagctaatgggctttctaatgggcttttagataaatcgattaggcttattgtaacgaaaaccctaatttttatacacatatacgcaacgct  10410200                                                  --------->SPL7                                                --------->LBD16                                          <------ZmHOX2a(2)                                         --------->ARR14(2)                                         --------->ARR11(3)                                         <---------ARR11(3)                                         <---------ARR14(2)                                   <---------GLK1(1)                                   --------->GLK1(1)                                  --------->ARR11(3)                                <---------YAB1  <---------SPL7                              <---------ICU4   --------->HSFB2a(2)                              --------->YAB1   <---------HSFB2a(2)       ----------->GT1                             <---------ATHB12 <---------LBD16      --------->ZAT6                <---                             --------->ICU4------>ZmHOX2a(2)      --------->GLK1(1)  ----------->RAV1(2)    ------>ZmHOX2a(1)---------->DOF2------>ZmHOX2a(2)       --------->GLK1(2)    --------->ARR11(3) ------DOF2    --------->At4g35610<---------ARR11(3)       <---------GLK1(2)     <---------ARR11(3)   ttcttcctcgagggatgagatgagaaagacaatgatgatctccgatcttccggacgatttagaatcggaactctagggtttaaaatcttctggccatagc  10410300              ----------->HVH21                                                                     <            --------->bZIP60(1)                                                             ---------            <---------bZIP60(1)                                                             <--------   --------->ARR11(3)           <----------DOF2                     <---------ANAC58        <--------   <---------ARR11(3)     <---------MYB52(1)            ------->MYC3<---------ANAC58        <--------   --------->ARR14(2)------------>AtMYB77               <-------MYC3<---------ANAC46        ---------  --------->RVE1(1)  ----------->RAV1(1)--------->MYB46(3)       <----------DOF2            ---------  --------->CCA1(1) ----------->HVH21   <---------MYB55(2)     ------>ZmHOX2a(1)          ----------- -------DOF2<---------REM1(1) ---------->ID1         <---------ALFIN1                --------->YAB1 -   tttaatatcttctgatgtaacagcgacagtttgtcttttccaacaactgatagaaccacgttttcctctttcgtttaagagttttaatcgtgaagatatt  10410400                                                           <-----------GT1 ---------At4g35610                                    <---------ARR11(3) >ARR11(3)                                           --------->ICU4 -ARR11(3)                                         --------->YAB1 -ARR14(2)                                    --------->ARR14(2) -ARR14(3)                                    <---------GLK1(2) >ARR14(2)        ---------->DOF2             <---------ARR14(2) >ARR14(3) --------->MYB55(2)                 <---------ARR11(3) <---------ARR11(3)      <----------DOF2 >ARR10    <---------MYB46(3)                <------ZmHOX2a(1)<----------DOF2     <---------TOE2(3) -------->At4g35610 ----------->GT1  <-----------GT1 <---------YAB1         <---------AHL20(2)   gcagctctatcagttgttgggaaagaaaaactcttagttttacatcaggattttcatgatttttctttatcttctggttttattgatgttcctttgttcg  10410500  Previous    Next  AGI:  At2g24500.1    Description:  FZF; transcription factor. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT4G31420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43939.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880) Range:  from: 10408115    to: 10410014    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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