Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                        <---------ARR14(2)                                         --                       ==============HOX2a_HOX2a                                        <---------ANAC58         <---------ARR14(2)             <---------ARR11(3)                              <---------ANAC58     --------->At4g35610       --------->YAB1                                    <---------At5g28300     <---------At4g35610      <------ZmHOX2a(2)                                 <-----------GT1  ---- ------->GLK1(2)       ------>ZmHOX2a(1)--------->ARR14(2)                   <----------DOF2     <--- ----------ARR10      <---------MYB59   --------->ARR11(3)              <---------ARR11(3)   -------- -----KAN4(2)      <---------PCF2<---------YAB1                         --------->ARR11(3) <---------LBD16 -ZmHOX2a(1)     <---------MYB46(3)<---------ARR11(3)             <---------HSFB2a(2)<---------MYB52(1)   taatctaagcagacatggatgggtcctaatcgatcaagatagtatcttccatataggtctcaagagtttgagaagatgtctttcaccgtttcatgcggaa  10386700              --------->ANAC46               <---------AHL20(1)              --------->ANAC58               --------->AHL20(1)              --------->ANAC58               --------->ARR11(3)                    <---------ARR11(3)            ---------->DOF2              <---------ZAT6             --------->ARR14(2)      ------>ZmHOX2a(1)         ------>ZmHOX2a(2)                   <---------ARR14(2)      =================================HOX2a_HOX2a                  <---------MYB52(1) ------->WRKY12------------>CBF --------->YAB1<---------AHL20(2)   <---------MYB52(1)      ------>ZmHOX2a(1) ------->WRKY38(1)              ----------->GT1                   --------->LBD16  --------->ARR11(3) ----->At4g35610              <---------ARR11(3)        --------->ARR14(2)        <---------GLK1(1) ------At4g35610  <------------CBF   --------->ICU4     <---------ARR14(2)        --------->GLK1(1) ->LBD16  <----------DOF2 <---------AtLEC2   <---------ARR11(3) <---------LBD16<---------YAB1      --   gttgactccttactttaagcaattgaatgcatgatcgtaattagtgatatatttggagttttcgcttccggttactctgatatgatatctttcctcgaca  10386800                                                                        --------->ZAT6            --------------->AGL15                                      <---------TOE2(3)            <---------------AGL15                          <----------DOF2       <---------KAN4(2)               <-----------GT1 ---------->ID1 <-----------GT1          <----- ------->YAB1              <---------ZAT6    ------>ZmHOX2a(2) <----------DOF2      <---------YAB1 <-   actataacgaatgaccaatatttgtaatagagatagtctattttcgatctctcatttgtttctttctttttttaacattacattttttcatagaattcta  10386900                                                         <---------AHL20(2)                                                        --------->AHL20(2)                                                        --------->YAB1                <----------DOF2                                                       <---------------AGL15         --------------->AGL15                 <---------ICU4                        ==============================================MADS_MADS                 --------->ATHB12                   --------->AHL20(2)               <---------------AGL15                <---------YAB1                     --------->AHL20(2)               -----------------                <---------ATHB12                   --------->AHL20(1)               -----------------                --------->ICU4               <---------At4g35610                    -----------------               <---------TOE2(3)        --------->WOX13(1)                        <-----------GT1       <---------GLK1(2)              <---------YAB1<---------AHL20(2)       <---------MYB52(1) ----YAB1----------->GT1         --------->DAG2    <---------AHL20(1)       <----------DOF2 --------ICU4<---------AHL20(2) ---------->DOF2    <---------AHL20(2)    <---------ZAT18   <------ZmHOX2a(1)   atactcacagattgtttaatgattttttcttacaaaaagtatcattcagataatttaataaaaatggtatcgcagtgcctttatttacctttaggagtaa  10387000                                           --------->ANAC55(2)                                           <---------ANAC55(2)                                           --------->ANAC46                                           --------->ANAC58                                           --------->ANAC58                                         --------->YAB1                                        <---------ATHB12                                 <-------MYC2                                 ------->MYC3                                 -------->ABF1                                 <-------MYC3                                 ------->MYC2                                 ------->MYC4                                 <-------MYC4                                ===============================MYC_MYB                                <---------ANAC55(2)                                --------->ANAC55(2)                                <---------O2                                <---------TGA1a                                <--------ABF1                           ----------->HVH21                     <------------CBF --------->WOX13(1)                 --------->TOE2(3)  ------------>CBF   ------->GAMYB   =======================================bZIP_DOF    --------->MYB46(3)   <----------DOF2------>ZmHOX2a(1)<-----------HVH21 --------->ANAC58           <---------ATHB12 >AG          <---------ARR11(3)--------->O2         --------->ANAC58         --------->WOX13(1) >AGL1       <---------GLK1(1)  --------->TGA1a    --------->MYB46(3)       ------------>CBF >AGL2       --------->GLK1(1)<---------ALFIN1   --------->AtMYB61 ---------->ID1--------->YAB1   gttttctttcttccgatatcctaaattgttcgacacgtgtcaatcacgaaaccacaaccaaaaaaccttgtcgtcttctccaatcataaaaaaaaaaaaa  10387100                                                                                       <------ZmHOX2a(2)                                                                                      --------->ARR11(3)                                                                                      <---------ARR11(3)                                                                                    ----------->ARR10                                                                                --------->LBD16                                                          --------->ARR11(3)    ------>NtERF2                                                          <---------ARR11(3)   <---------DEAR3(1)                                                    --------->ANAC58      --------->ARR14(2)                                                    --------->ANAC58      <---------ARR14(2)                                   --------->AHL20(2)     --------->GLK1(2)   <---------LBD16                                --------->YAB1      <----------ID1        <-----------ARR10      *TSS                     <-------TEIL         ----------->GT1      <---------CCA1(2)  <--------   aaacagtgtcccaatttgatcaaacaaaacaaattcataaattcggagaagagaacgaaaaatcttcttgttggcaaatctccggcgagatcatctttct  10387200                                 --------->ANAC58                                 --------->ANAC46                                 --------->ANAC58                                <------NtERF2                               --------->RAP2.6(2)                              <---------DEAR3(1)                              --------->ATERF1(1)                             <---------DREB2C(1)                             <---------ATERF1(1)                             ------>NtERF2                             --------->ATERF1(1)                             <------NtERF2                             --------->DREB2C(1)                            ------>NtERF2                            <---------ATERF1(1)                            <---------ERF1                            <---------SPL7                            <---------RAP2.3(1)                           --------->ATERF1(2)                           <---------RRTF1(3)                           <---------DEAR3(1)                           <---------ATERF1(2)                           <---------RAP2.6(2)                           <---------ANAC58                           <---------DREB2C(2)                      <---------O2      <---------O2                                               <-              --------->HSFC1(2)------>NtERF2<---------ANAC46                                    ----              <---------HSFC1(2)--------->LBD16                                                  ----         --------->ANAC58  <---------RRTF1(2)<---------ANAC58                               <--------         --------->ANAC46  <---------RAP2.3(3)     <-----------GT1                       ------->TEIL         --------->ANAC58  <---------RAP2.3(2)<-------GAMYB                             <---------CCA1(2)        --------->LBD16    <---------ANAC58 <------NtERF2                      <-----------GT1  ----- --DOF2 <---------LBD16   --------->RAP2.6(3)<---------ANAC58        <<<<<<<<<MYB2<---------ALFIN1---   tattttgttccacggaagtttcagacatggcggccgcgaaactcgtggcgttgttacttcttctcgccttggttttcaatttcaccacttgtatctttgc  10387300                        ------->TEIL                  <---------DEAR3(1)                 <------NtERF2                 --------->ATERF1(1)           <------NtERF2                <---------ATERF1(1)            --------->At5g28300                <---------DEAR4(2)            ----------->GT1                ------>NtERF2                 <---------MYB46(3)                <---------ERF1               <---------ANAC46                <---------RAP2.3(1)          <---------DEAR3(1)                <---------ORA47(2)          <---------------------WRI1               <---------RAP2.3(3)          <---------ABI4(1)               <---------RRTF1(3)           <------NtERF2               --------->DEAR3(1)          <---------ERF1               <---------RAP2.3(2)         <---------RAP2.3(1)               <---------DEAR3(1)          <---------RRTF1(1)              <---------ABI4(1)            ------>NtERF2             <---------DEAR4(2)           <---------RAP2.3(3)             <---------RAP2.3(1)          --------->ATERF1(2)             <---------ERF1               <---------ATERF1(2)             ------>NtERF2                <---------DEAR3(1)                              <---------TOE1(2)             <---------ATERF1(1)         --------->SPL7                                   <---------TOE2(2)             <---------RRTF1(1)        ----------->HVH21                                 --------->STY1(1)            <---------DEAR3(1)        ------>ZmHOX2a(2)                           <---------ANAC58         ----------->HVH21            --------->DEAR3(2)                          <---------ANAC55(2) -----NtERF2<---------RAP2.3(2)      <------ZmHOX2a(2)                         <---------ARR14(2) ------->HVH21<------NtERF2          --------->CCA1(2)                         --------->ARR14(2) ----->DEAR3(1)<---------ANAC46     <---------ARR14(2)                       ----------->ARR10  ----- --DOF2 --------->DEAR3(2)          --------->AGP1                <---------At4g35610    <---------STY1(1) ---->DEAR3(2)--------->ATERF1(1)   --------->ARR14(2)            --------->At4g35610<---------ZAT18 --->NtERF2 <---------RAP2.3(3)   ----------->ARR10            <------ZmHOX2a(2)  <---------ANAC58  -   cgacgctggaatcgacggcggcgatgaaccgaaacttagatccgacggcggtgatatcgaattggatcagcttaatgctaaaatccgtgccctaggttac  10387400                                                              <---------ANAC58                                               <---------ARR14(2)                                               --------->ARR14(2)              <---------AHL20(2)                                        --------->YAB1        <---------ANAC58--------->AHL20(1)                                       <---------ATHB12       <---------ANAC46--------->AHL20(2)      <----------DOF2                --------->WOX13(1)   <---------ANAC58    <---------AHL20(2) ---->ZAT6   <---------MYB52(1)   <-----------HVH21       <---------ANAC46    <---------AHL20(1) -------->YAB1           <-----------GT1----------->GT1   <---------ANAC58   --------->AHL20(2)<-----   actcagaactttacagttacttcaattttacttctatgtcaatcgtgaaaatttgctatggcttgtgtgaatttctcaaattaatttttgttttcttctt  10387500     <---------MYB46(3)     <------MYB83     <------MYB46(1)    --------->MYB46(2)    --------->MYB111(1)             --------->ANAC58    --------->MYB55(2)              --------->ANAC46    <---------MYB46(3)              --------->ANAC58    <---------DEAR3(1)    --------->YAB1                                       --------->HSFB2a(1)    <---------AtMYB61    <---------YAB1                                        <---------HSFC1(2)    --------->MYB111(2) <---------TOE2(3)                                      --------->HSFC1(2)   <--------P--------->GLK1(2)    --------->TOE2(2)                            <---------HSFB2a(1)   <---------MYB55(1)   <---------------------WRI1        ------------>MYB.PH3(2)                ----  <-------GAMYB        --------->YAB1                    <---------ZAT6   <------ZmHOX2a(1)      ---- <---------MYB46(3)  <---------WOX13(1)     ---------->DOF2              ----------->GT1     -------- -----DOF2  <---------GLK1(2)     --------->TOE1(2)<------NtERF2--------->MYB52(1)          <--------   ttttggttggtgaagaatctcagattgatgataaaaccaaggaacttaaaggcagagaagagttagtaacagagaaggagaaacttcttcaagagagaca  10387600  Previous    Next  AGI:  At2g24420.1    Description:  DNA repair ATPase-related. similar to myosin heavy chain-related [Arabidopsis thaliana] (TAIR:AT4G31340.1); similar to unknown [Populus trichocarpa] (GB:ABK94806.1); contains domain Apolipoprotein (SSF47162) Range:  from: 10387106    to: 10390485    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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