Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------MYB52(1)                         <---------ZAT2                         <---------At4g35610                         --------->ZAT2                         --------->At4g35610              XXXXXXXXXXXXXXXXXXXXX>MIR777                                <-------MYC3            <---------ANAC55(2)               ----------->GT1             ------->MYC3            --------->ANAC55(2)              <---------TOE2(3)           --------->ANAC55(2)       <---------------AtSPL3            <---------ATHB12                <---------ANAC55(1)      --------------------->WRI1---------->DOF2                     <---------YAB1     --------->YAB1 --------->At4g35610  <<<<<<<<<ARR2            --------->YAB1                 <---    <---------YAB1  <---------At4g35610--------->WOX13(1)         <---------ICU4                 <---   <---------ARR11(3)  <-----------RAV1(2)--------->YAB1         <---------ATHB12     <-----------GT1   ctcgatatcatagtacgtattgagctcagttggctaaagaacaatcaaaggttaaaccaagagccaaatcatgaaacgtgtttgaaattatctctcttac  10353500          <---------At4g35610                                                    <---------YAB1          --------->At4g35610                                                    --------->ICU4      <---------REM1(1)                                                        <--------HAHB4    <-------GAMYB                   ----------->GT1                            --------->YAB1 <---------ANAC58                <---------ZAT2                             --------->YAB1 <---------ANAC46            <---------ICU4        ---------->DOF2     <-------TEIL      ---------->DOF2 <---------ANAC58            --------->YAB1 --------->YAB1       <-------TEIL <---------YAB1 ------ANAC58               <---------YAB1 <---------ATHB12  <---------TOE1(3)--------->ICU4 ------ANAC58             --------->YAB1 --------->WOX13(1) <-----------RAV1(2)<---------ICU4   <----   cttgcctgttgaagctccatagcctgaataatcatagctggttcaatcacatataaagaagttcaggttcaagttcgttcatcattatcaacaaagagag  10353600                                                                                                 <---                                                                                                -----                                                                                               ------                                                                                              -------                                                                                              <------                                                                                            <--------                                                                                            ------>ZmHOX2a(2)                                                                                           --------->CCA1(2)                                                                                           --------->ARR14(1)                                                                                           <------ZmHOX2a(2)                                                                                          --------->ARR11(3)                                                                                          <---------ARR11(3)                                                                                          <---------ARR14(2)                                                                                          --------->AGP1                                               <---------At4g35610                       <---------GLK1(1)                                            --------->LBD16                              --------->GLK1(1)                                          <---------LBD16                               ----------->ARR10                                    <---------ICU4                           <---------ATHB12 -------                                   --------->ICU4   --------->At4g35610 --------->ARR11(3)--------->ARR14(2)                                 <---------ICU4--------->At4g35610      <---------ARR11(3)<---------ARR14(3)        <-----------GT1     --------->TOE2(3)<------NtERF2 --------->ZAT2   -------->P <------NtERF2 -----ZAT14              <-----------GT1 <---------ANAC46  <---------ZAT2<------ZmHOX2a(2)--------->ARR14(3)   aagtgttttttgactatttgtatgtataaacctcataatgttgacgcggagatgagctcgaagctcgatgaagagatcaaccatttggccgagatccgcg  10353700                                                                                        --------->At4g35610                                                                                     <---------ZAT2                                                                                     <---------At4g35610                                                                                     --------->At4g35610                                                                                  <--------P                                                                             <------MYB46(1)                                                                             <------MYB83                                                                            --------->MYB111(1)                                                                         <---------ARR14(2)                                                                         --------->ARR14(2)                                                                         <---------GLK1(2)      --------->O2                                          --------->ARR11(3)  <---------MYB46(3) ---NtERF2                                         <-------MYC3       <---------------AGL15 ->NtERF2                                          ------->MYC3       --------------->AGL15 --->ANAC46              --------->GLK1(2)   <---------HSFB2a(2)     ----------------->AGL3 -->LBD16                ------->TEIL        --------->HSFB2a(2)     <-----------------AGL1 ---LBD16                <---------ARR14(2) ----------------->AGL1   ----------------->AGL1 -LBD16             ----------->GT1    --------->ALFIN1   ----------->HVH21 <---------AtMYB61    <--- -->At4g35610---------->DOF2     ---------->DOF2  <---------O2       <-----------------AGL2  ------->TEIL   gcattgccatgtgaataaagaagagtgaatctagagaaagggtgtttccaaaacgtggcaatgaccttgttgccagatttggtggtaagctgatgaacat  10353800                                                                                <---------MYB46(3)                                                                             <---------DEAR3(2)                                                                             <---------MYB46(3)                                                                            <---------ANAC46                                                                            <---------DEAR4(1)                                                                            <---------DEAR3(1)                                                                            <---------DREB2C(2)                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                       --------->MYB52(2)                                                                       <---------MYB46(3)                                                                       <------MYB46(1)                                                                       <------MYB83                                                                      <---------AtMYB61                                                                  <---------TOE2(2)                                                               <---------ANAC46--------->ALFIN1                                                             <-----------HVH21<-------GAMYB                                                            =====================================bZIP_DOF                                                            =====================================bZIP_DOF                                                            --------->bZIP60(2)<---------ANAC46                                                            <---------TGA1a--------->ATERF1(1)                                                            <---------O2   <------NtERF2                                                            --------->ANAC46<---------RAP2.6(2)                                                            --------->TGA1a<---------ABI4(1)                                                            ==========================MYC_MYB  ======                                                    ==================bZIP_DOF<------NtERF2    <-----                                               ------>ZmHOX2a(1)  <---------TOE1(2)   ---------->DOF2                      --------->LBD16   --------->LBD16     --------->O2 <---------DEAR3(1)--------->ZAT18                     --------->LBD16  <---------LBD16     <---------ALFIN1<---------ERF1   <---------ZAT18   <----------DOF2  <---------LBD16===================================bZIP_DOF======================= ----TEIL    <---------ZAT6        <----------DOF2  <----------DOF2<-----------RAV1(1)===============   ccatgcttttttctggtgttatcccggtgaacataagctttccggtctcctcgtctttacccacgtcgtatgttggtggcggtgggaagaaagcgaactt  10353900             <-----------HVH21             <-----------TGA1            <---------bZIP60(1)            --------->bZIP60(1)            <---------TGA2(1)            --------->bZIP60(2)            --------->O2            <---------O2            --------->TGA1a            --------->TGA2(1)            <---------TGA1a            --------->ANAC46             <---------YAB1            --------->ANAC55(2)         <------------CBF            ==================================================bZIP_DOF            <<<<<<<<<<HY5              --------->ATHB51         ----------->HVH21             -------->ATHB1     --------->ICU4                   <---------YAB1       ---------->DOF2 ------>NtERF2                      <---------ZAT6     ----------->GT1                  <------ZmHOX2a(1) <---------RAP2.6(3)      <---------CCA1(2)           ----------->GT1                  ----------->GT1 =====================bZIP_DOF     <---------YAB1    --------->DAG2                  ---------------- -----DOF2 <-----------STF1 ------------>CBF       ---------->DOF2               ---------->DOF2 =====================MYC_MYB    --------->YAB1 <---------At4g35610           --------->YAB1 =====================bZIP_DOF--------->WOX13(1)--------->At4g35610      ------------>CBF   tgcagccatgtttgacgtcacattacccatatcaattagtattattgttcagcaaaagggtaaaagaaaaaaactttcaatgagaaagaaggagaaaaca  10354000                     --------->RVE1(1)                                                            <--                    --------->ARR11(3)                                                     <---------TOE2(2)                    --------->GLK1(2)                                                      <---------TOE1(2)                    <-----------ARR10               ---------->DOF2                      <---------LBD16                    <---------ARR11(3)        ------>ZmHOX2a(2)                         <---------ANAC46           <---------ALFIN1                 <---------AGP1            ----------->GT1   <---------ANAC58 -------->ANAC81   <---------GLK1(2)   <----------DOF2       ---------->DOF2            <---------ANAC58   aaaacaaaaacccaaaccccaaaatctctccctccctctctctttggatctaagaaaagaaaacaaagaaaatggttaaatttttgtgtttcgtgggttt  10354100                                                     --------->LBD16                                      <---------ANAC46    ---------->DOF2                                    <---------MYB46(3)<------NtERF2                                   <---------AtMYB61<---------ANAC58                                --------->ALFIN1    <---------ANAC46                                -                     --------->AHL20(1)             <---------ANAC58                   --------->AHL20(1)                     --------->AHL20(2)            <<<<<<<<<E2Fc                       <---------AHL20(2)                     <---------AHL20(2)            <<<<<<<<<E2Fd                       --------->AHL20(2)               ----------->GT1<------MYB83         <---------LBD16           --------->TOE2(3)   ----          ------------------------>ANAC81   --------->GLK1(2)        --------->At4g35610        <---- -------YAB1<------ZmHOX2a(1) <------MYB46(1) <---------ARR14(2)     <---------At4g35610<---------AHL20(2)   atgtttaggggagaggaaggaaataaaatggaaggtgatggtggagaatatttggcgggagaaagaagttgagctgtttcattaacaaatttaatataga  10354200        <---------AHL20(1)                <---------AHL20(2)        --------->AHL20(1)                --------->AHL20(1)       <---------AHL20(2)                 --------->AHL20(2)     <-----------TBP             <---------At4g35610                            <---------ARR11(3)  <---------MYB52(1)--------->At4g35610   <---------AHL20(1)                    --------->ARR11(3)  < ---------->GT1     <---------At4g35610  --------->AHL20(2)                    --------->GLK1(1)  --- ----->GLK1(2)      --------->ZAT2  --------->At5g28300         <-----------GT1<---------GLK1(1) <<<< -----GLK1(2)       <---------ZAT2 ----------->GT1       <---------YAB1   ----------->GT1        <---   ttctgttatatatattaaactcagctacaaatttcaactgtgaataaatttgatgctatatgattttcaccatgaaatgtgatatctcttcattccacaa  10354300            <---------At4g35610        --------->ANAC58                           --------->AtMYB61        --------->ANAC58           --------->TOE2(3)        --------->ANAC46         ------->TEIL      ------->GAMYB <---------ICU4        <-----------GT1       --------->ZAT6 ---------YAB1     <---------ARR11(3)        --------->ANAC46                                  ------ ------>YAB1--------->ZAT2       -------->P<-----------GT1                                   <------- <<<<<ARR2  --------->At4g35610 <-----------GT1   --------->MYB46(3)                      <----------DOF2 ------ATHB12      <---------GLK1(2)     --------->AHL20(2)    <----------DOF2    <-----------GT1   tcaaaattgcaagcagctacagattttagcatatcaacctcattttaacacaaccatctctctctcttttggcacaaacacttgaaacccttcttttacc  10354400  Previous    Next  AGI:  At2g24320.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31020.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22751.1); contains domain PTHR12277:SF8 (PTHR12277:SF8); contains domain PTHR12277 (PTHR12277); contains domain SSF53474 (SSF53474); contains domain G3DSA:3.40.50.1820 (G3DSA:3.40.50.1820) Range:  from: 10352501    to: 10353909    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g24330.1    Description:  Identical to Uncharacterized protein At2g24330 [Arabidopsis Thaliana] (GB:Q9ZQ34); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G31080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66718.1); contains domain FAMILY NOT NAMED (PTHR22166); contains domain SUBFAMILY NOT NAMED (PTHR22166:SF1) Range:  from: 10354240    to: 10356905    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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