Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------->AHL20(1)               --------->AHL20(2)                                          <---------AHL20(1)            <----------DOF2                                        <---------AHL20(2)           <---------ALFIN1                                       --------->YAB1               --------->MYB46(3)                               <-----------GT1     <---------At4g35610  <---------DAG2     <---------DAG2     --------->ANAC55(2)  <---------AHL20(2)     <---------MYB55(2)     <----------DOF2  <-----------GT1 <---------AHL20(2)           ------>MYB46(1)  <---------ALFIN1    <---------AHL20(2)<---------AHL20(1)         -------->P                 ------- --------->MYB46(3)<---------ICU4    --------->AHL20(2)            ------>MYB83   -------->P <-------TEIL   tcaaccacttttgccatctaatatttacttattttgctatataatattttttcagctattttgttagccaaccacttttaaatctaccaaaaacattcat  10351000                                                            --------->YAB1                                                          ------>MYB83  --------->AHL20(2)                                      ------>MYB46(1)  <---------AHL20(2)                                    ------->GAMYB                            <--- --------->AHL20(1)                                     <---------MYB59                        ------ <---------AHL20(1)                                  <-----------GT1                   <<<<<<<<<<<<<< <---------AHL20(2)                                  --------->MYB52(1)               <-----------GT1 --------->AHL20(2)                             <---------AHL20(2)        <---------ARR11(3)   <----- -->YAB1                                        <---------YAB1            <---------AHL20(1) <-------   caatttattttgaaatattgattttcaactagtatgtttttatgtttttttttattaaccgaacataactaaacaatatataccaaaataaccagtggat  10351100 <-------TEIL ----TEIL --->ARR14(2)           ------>ZmHOX2a(1)                                       --------->ANAC46 <<<LFY                --------->TOE2(3)          --------->DAG2                --------->At4g35610 ----ARR14(2)         --------->YAB1             ---------->DOF2              <-----------GT1 --MYB46(3)     <-----------GT1          <-----------GT1                   <---------CCA1(2)       <-   acatacataaacttctaatttcaatcctaaaactgtcattttttaacaaaaaaaagttaacttctaatttcattttcatatcacctcacttatttgagtt  10351200                                                    <---------ANAC58                                                    <---------REM1(1)                                                    <---------TGA1a                                                    <---------bZIP60(1)                                                    <---------ANAC58                                                    --------->bZIP60(1)                                                    <---------bZIP60(2)                                                    <---------ANAC46                                                    --------->O2                                              --------->GLK1(2)                                              <---------ARR14(2)                                <---------ANAC58   <---------TOE2(3)                      <------MYB46(1)         --------->ARR14(2)                      <------MYB83     <---------ANAC46                    ==========================================MYC_MYB                             ---                  <------MYB83  <---------ANAC58 ----------->TGA1                                 <--                  <------MYB46(1) --------->ALFIN1<---------TGA2(2)             --------->ATHB12-----                  <---------MYB46(3)   <---------ANAC58                        <-------TEIL   <------ZmHOX2a(2)  --------->TOE2(3) <--------P  <---------ANAC46 ----------->HVH21          <------ZmHOX2a(1) <------  --------->TOE1(3)<---------ANAC46    <---------ANAC58                     =========================HOX2a_HOX2a  <----------DOF2 --------->MYB55(2)--------->ALFIN1<---------O2     --------->MYB46(3)      <------- ----------GT1    --------->ATHB12<-----------RAV1(1)              <-----------GT1           --------   ttaactttaatcgacgagattggttggacatgttgagtgtggctcgaggttctgacgtagcgactaaattaaccaataggattcattgcatttaagatca  10351300          <---------MYB52(1)         --------->TOE2(3)        <---------ANAC58   <---------AHL20(2)  <---------AHL20(1)  <---------AHL20(2)                      <---------AHL20(2)  --------->AHL20(2)                     --------->AHL20(2)                        <---------------AGL15 ------>AHL20(2)                   <---------LBD16                          <---------ZAT18 -------AHL20(2)                 --------->SPL7<-----------GT1          --------->ANAC46  ------->GAMYB ---->TOE2(3)                    --------->ARR14(2)                  --------->ZAT18    <---------LBD16 ---YAB1<---------ANAC58         <---------ARR14(2)                  <---------ZAT14   --------->MYB52(1) --ARR11(3)                    ----------->HVH21                     --------->ZAT14   <-----------GT1 ->ARR11(3)       --------->MYB52(1)--------->LBD16           ----------->GT1      <----------DOF2   ttaattaatttcgttagtaataccggtgtaaaccggaccgggattaattttactaaaccagacttggttactacactgagcgctccttttaacggaagag  10351400                                                                                <---------CCA1(2)                                                                            --------->ANAC58                                         <---------ANAC46                   --------->ANAC58    -----                                        <---------LBD16                   ---------->DOF2       <----                                      *TSS <------NtERF2             <---------ARR14(2)        <-----                            --------->YAB1--------->LBD16            --------->ARR14(2)        ------   actgagacagtggaagagtcactcactcactcatcaaaaaatggcggaaaatgttggaagcgactcgagcgaattcgaaagcatctcttcttctcagaaa  10351500                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                  ---                                                                                                  <--                                        <---------ETT(1)        <---------ZAT14                 <----                                  --------->ARR11(3)            --------->ZAT14                ------                             --------->ANAC46                 <---------bZIP60(1)       --------->GLK1(1)                             --------->ANAC58                 --------->bZIP60(1)       <---------GLK1(1)   --------->TOE1(3)         --------->ANAC58           --------->GLK1(2)     --------->HSFB2a(2) <--   --------->TOE2(3)      ----------->HVH21            <---------GLK1(2)      <---------HSFB2a(2)<--- ---->ARR11(3)           <-----------HVH21             --------->ARR14(2)    <---------LBD16   ------ -----ARR11(3)          <---------DEAR3(2)         <---------LBD16          <---------LBD16   <------ ----GLK1(1)     ------>ZmHOX2a(1)<---------ARR11(3)   <---------ARR14(2)<---------ARR14(2)  <------- --->GLK1(1)     <----------DOF2------->TEIL      --------->MYB52(1)  <---------TOE2(3)<---------GLK1(2)   tcttacctcaaaaactgtcctttcgccggtcacgaagctcttccgacaaaatcgacggattctgacaacactgaggttctcgggaaccagatttctccgg  10351600                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                   --------------->AtSPL3                                                                 <----------DOF2  <-------GAMYB                                              <---------ANAC58 ----------->GT1                                             <---------ANAC46 <---------MYB46(3)                                          <---------TGA2(1) ---------MYB55(1)                                           <---------bZIP60(2) --------P                                                   <---------ANAC58 ------GAMYB                                                 --------->bZIP60(1) ------>MYB55(2)                                             <---------bZIP60(1) -------MYB46(3)                                             --------->TGA2(1) -----MYB52(1)                                               --------->O2 >NtERF2                                                     <---------O2                           < -------DEAR3(2)                                            ----------->STF1             <---------CCA1(2) ------DEAR3(1)--------->GLK1(2)                           <---------TGA2(2)   ------>ZmHOX2a(1)  --- --->LBD16    <---------GLK1(2)                           ----------->HVH21    --------->LBD16    --- ---DEAR3(1)  --------->ARR14(2)                          ----------->TGA1   ----------->RAV1(2)  <-- --LBD16      <---------ARR14(2)  ------>NtERF2         --------->YAB1      ------>ZmHOX2a(1)     ---   cggttgttaaaactccgattctctcgttctcttctccgactagcctcgattctatcaacgatgacgtctttcgtactcctcctgagaacgcgtctctctc  10351700                                                            --------->At4g35610                                                            <---------At4g35610                                                           --------->GLK1(2)              <---------ARR14(2)                           --------->ARR14(2)    ------>NtERF2                                          <---------ARR14(2)    <---------At4g35610                                    ------->TEIL    --------->At4g35610                                <-------TEIL ------>NtERF2--------->ARR14(2)                    --------->HSFC1(2) <---------At4g35610            <---------ANAC46    <---------HSFC1(2) -----------RAV1(1)          <---------ARR14(2)     <---------HSFB2a(1) -------->RAV1(2)            --------->ARR14(2)     --------->HSFB2a(1) ------>At4g35610       --------->ALFIN1           <---------------AtSPL8                ----------->HVH21 -------At4g35610      --------->ALFIN1   <---------At4g35610            <---------MYB52(1) --->ZmHOX2a(1)    --------->LBD16        --------->At4g35610 ----------->HVH21    <---------ANAC46   ctctgccgctgaatcggaacccagagttggggtttcggagattaagctccaaggaggttcgaatctgacaactccgttttctatggctgagacgacgctt  10351800                       --------->LBD16                      <---------ANAC46                     <---------LBD16                    --------->LBD16                                                                 -                    ------>NtERF2                                                              <-----            <---------CCA1(2)                                                                <-------           ------>NtERF2<------NtERF2                          <<<<<<<<<TBF1                 --------          --------->DEAR3(1)      <---------TOE1(3)     <---------ARR11(3)          ----------->RAV1(2)   <<<<<<<<<TBF1  <---------LBD16 <---------TOE2(3)     --------->ARR11(3)         ------>NtERF2  <--   gtttcttcttcgccgtctcttccggcggaaaatgttagggtttcagagtcgaatttgaaatcttcttcttctacggccaaaacgacgcctgtttctgctt  10351900  Previous    Next  AGI:  At2g24310.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47170.1) Range:  from: 10351438    to: 10352590    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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