Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <----------DOF2         <-------MYC2         ------->MYC2                                                                               -         <-------MYC4                                                                               -         ------->MYC3                                                                        ------>ZmHOX2a(2)         <-------MYC3                                             <XXXXXXXXXXXXXXXXXXXXXXXMIR836    -     --------->ZAT18                                             ----------->HVH21           --------     <-------TEIL <---------ANAC58        --------->TOE1(2)    <---------ANAC58            --------->ARR14(2)     <---------ZAT14                 --------->WRKY38(1)       <---------ANAC58            <---------ARR14(2)     <---------ZAT18           --------->GLK1(1)               ----------->GT1      <---------GLK1(1) ------HSFB2a(2)  <---------ANAC58   --------->WRKY12        <---------ANAC46 ---------->DOF2-------- ----->HSFB2a(2)<-----------GT1<---------ARR14(2)   ----------->GT1       <----------ID1--------->ALFIN1   tcgagggtgcacatgtttttgctttctgaagggaattcgttgaacgagggaagagagtaacttgggcgtaacaagggagacaaaggaaatgtggatcgcc  10324000                                                             <-------TEIL      --------->ZAT2 --------->ZAT2                                             --------->CCA1(2)  <---------ZAT2 --------->At4g35610                                       <---------ARR14(2)  --------->At4g35610 -------->ANAC58                                           --------->ARR11(3)  <---------GLK1(1) -------->ANAC46                                           <---------ARR11(3)  <---------At4g35610 -------->ANAC58                                           --------->ARR14(2)<---------ZAT18 ->ANAC58                                        <---------GLK1(2)       <-----------RAV1(2) ->ANAC58                                        <---------ARR11(3)     ------>ZmHOX2a(1)       <----   acaagctgcaaacagagcgagcatgaacaacatcgaaacagttgtcccctagatacttcaagatacagtagctcctcagggagctcagaccagtctgggg  10324100                                                                                       --------->AHL20(2)                                                                                       <---------AHL20(2)                                                                             --------->ARR14(2)                                                                             ------->TEIL                               <---------ARR14(2)                            <---------ARR14(2)                               --------->ARR14(2)                      --------->TOE2(2)           <- ---GAMYB            ---------->ID1    --------->ICU4                  --------->TOE1(2)      <------   ttatcgatgatgttgatgtcttcttcgttttgggttctgccatgtttgctaatggagacagaaaacgctgcaatctacgaatttgctaaaaaaattctaa  10324200                                                                                           <---------MYB52(1)                                                                                          --------->At5g28300                                                                                         --------->ANAC55(2)                                                                                         <---------ANAC55(2)                                                                                         ----------->GT1                                                                                     <---------SPL7                                                                                    ------>ZmHOX2a(2)                                                                                   --------------->AtSPL8                    --------->At5g28300    ----------->GT1                         --------------->AtSPL3                   ----------->GT1       <---------LBD16                           <---------------AtSPL3                 --------->ZAT14    --------->AHL20(1)                          <---------YAB1<------             <---------------AtSPL8 <---------ARR11(3)                        --------->CCA1(2)             <---------------AtSPL3 --------->ARR11(3)       --------->ATHB12--------->ARR11(3) ----------GT1   <---------ZAT14    <---------AHL20(1)      <-------TEIL     <---------ARR11(3) ---YAB1   --------->ATHB12   ----------->RAV1(1)     --------->LBD16  ---------->DOF2 --------->SPL7   tttacatttgaattgattgtacagtaaaatcgcaacaaaatattggggaaaaaacccgaagattcatttggcataaagagatatgatcgtaccgtaactt  10324300                                                                                         <---------At4g35610                                                                               <---------GLK1(2)                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                                <---------ANAC46--------->GLK1(2)                                                      ---------->DOF2         <---------HSFC1(2)                  --------->GLK1(2)             <---------TOE1(3)             <---------HSFB2a(1)       --------->ARR11(3)                       <---------TOE2(3)      ---------->DOF2   --------->LBD16       <---------ARR11(3)                 <---------YAB1  --------->ARR11(3) ----------->ARR10 ---ANAC46 <---------LBD16        ----------->GT1  <----------DOF2 <---------ZAT14       --------->At4g35610   ggagcccaaggtctctggagaatttgaaggaagagagagtgattttgattaagctttaaagaaattgagtatacaaaggaagaatcgcttccgctgtagc  10324400                                                                  <---------PCF2                                                        --------->CCA1(2)                                                       --------->ARR11(3)                                                       <---------ARR14(2)        --------->MYB52(2)                             <---------ARR11(3)                  --------->ARR14(1)      <---------MYB52(1)                               --------->ARR14(2)                 --------->ARR14(2)     <<<<<<<<<<AtWER                                 ----------->ARR10   <------------CBF <---------ARR14(2)    <---------ZAT6                        <---------ANAC46       ----------->HVH21      ----------->ARR10  <---------At5g28300                     <---------ANAC58     --------->ALFIN1       --------->ALFIN1 <-----------GT1                 *TSS     <---------ANAC58  <---------TOE2(3)  ---------->DOF2     --   aatttactgttagtgtcgattgtgaagtttgccctagactagtgtcgtagacgagaagatttgaggtgggacatgaattgagaaagaggtgggattcggt  10324500                                   ----------->GT1                                   <---------DEAR3(2)       <-----------GT1                 <------ZmHOX2a(2)                     ------->GAMYB<---------DEAR3(1)      --------->AHL20(2)               <---------ARR11(3)       <------------CBF     <------------CBF  <---------ANAC55(2)                      ---------->DOF2  <------------CBF--------->MYB52(1)<-------GAMYB   <---------At4g35610         <---------YAB1 <----- ------->HSFB2a(2)<-----------GT1<---------ORA47(1) --------->At4g35610   <---------YAB1   --------->ARR11(3)   tcgagattgaattgggaaattaaccgaaggaattggccggttaaaatcaagtgaagctgattaaacaattcgggttttgattttgaatataaagatcacg  10324600                  ---------->DOF2               --------->ANAC58                           ---------->DOF2           --------->ATHB12                            --------->ANAC58         <---------WOX13(1)              --------->YAB1--------->ANAC58        >>>>>>>>>GATA-2            ------->TEIL        --------->ANAC46        >>>>>>>>>GATA-1    <---------ANAC58            --------->ANAC55(1)        >>>>>>>>>GATA-3    <---------ANAC58 --------->ATHB12  --------->ALFIN1                      <        >>>>>>>>>GATA-4<----------DOF2--------------------->WRI1 <---------ANAC46                 --- ----ANAC55(2) --------->ANAC58   <---------CCA1(2)    <---------ANAC55(2)   <---------MYB46(3)------   tttgatagtggattgataggcaaagctttgcgagatgtatctttgatcatttggaacacgcaaagtgttgtgttcttgttcgttcaattctaaaacaaaa  10324700          --------->DAG2        ---------->DOF2                                                                     <--------    <---------WOX13(1)                                                            <---------ARR14(2)  --------->ATHB12                                      --------->ATHB12          --------->ARR14(2) ---------WOX13(1)                             ----------->GT1 <----------DOF2   --------->GLK1(1) ------>ATHB12                   --------->ZAT18    --------->DAG2               <---------GLK1(1) -- --->MYB52(1)--------->CCA1(2)   <---------ZAT18   ---------->DOF2   ------>ZmHOX2a(2)   <-------TEIL   cgattgattgaaaaggtatgagtttgtgaagtttgtgcaatagattgcaaggttaaagcgattggctttgatcgaatgggagcatttccgatacatgtag  10324800                                                                                                   <x                                                                                                  <xx                                                                                                  <xx                                                                                           <---------MYB46(3)                                                                                           <------MYB83                                                                                           <------MYB46(1)                                                                                         <---------WOX13(1)                                                                                       --------->ATHB12                                                   --------->ANAC46                   xxxxxxxxxxxxxxx                                                   --------->ANAC58                  <----------DOF2                 ----------->GT1                   --------->ANAC58                 <---------ANAC58<          <---------------AGL15           <---------HSFB2a(2)                       xxxxxxxxxxxxxxxx>smallRNA(s)    --------->ARR14(2)                    --------->HSFB2a(2)                       <---------ANAC58<    <---------ARR14(2)                  --------->At4g35610     --------->AHL20(1) <xxxxxxxxxxxxxxxxx    <---------ARR11(3)                  --------->ZAT2  ----------->GT1        <xxxxxxxxxxxxxxxxxxxxx -REM1(1) --------------->AGL15         <---------ZAT2---------->DOF2         xxxxxxxxxxxxxxxx>smallRNA(i) --------->RAV1(2)      ----------->GT1 <---------At4g35610    --------->YAB1 xxxxxxxxxxxxxxxxxxxxxxx   cgcctggatattcaaaaaatggaaaattgaaaatagagaggctgctcgaaaacactcaaagttaaaaataatgtattagacttagggcttgattggttct  10324900  Previous    Next  AGI:  At2g24255.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G64840.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174) Range:  from: 10322595    to: 10324433    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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