Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         <---------TOE2(3)                                                  <---------ANAC46                                                  <---------ANAC58                                                  <---------ANAC58              ------>NtERF2                      <-------TEIL                     <---------ZAT2     --------->MYB52(1)                     <---------HSFB2a(2)                   <---------At4g35610  <------NtERF2                             --------->HSFB2a(2)                   --------->ZAT2    - --------->RAP2.6(2)                      ------>ZmHOX2a(1)       <---------REM1(1)                <- ------->At4g35610                      ------>ZmHOX2a(2)--------->ARR11(3)       --------->At4g35610   gagcggcaaacagagcgggcatgaacagcatcgaaatagtgatcctctagatgcgttgagataatgtgaagtagctcttcagggagctgagaccagtctg  10321600                            --------->ATHB12                           <---------YAB1   <---------At4g35610                       <----------DOF2      --------->At4g35610    <---------At4g35610                 <---------ARR11(3)      <---------At4g35610       --------->At4g35610                 --------->ARR11(3)   <---------ANAC58            <-----------RAV1(1)      <---------DAG2 -------->ICU4  <---------GLK1(1)     <---------ANAC58          <---------At5g28300        <--------- ---------DOF2  <---------CCA1(2)   <---------YAB1             <-----------GT1       <-----------GT1   gcattatcgatgatgttgatatcttctttttcattgccatgcttgctgctgaagaacacagaaatttactgctgcaatttcgaaaatttacaactttttt  10321700                                                 --------->KAN4(2)                                                --------->HSFB2a(1)                                                <---------HSFB2a(1)                                           --------->HSFB2a(2)                                     <---------------AGL15                               <---------AHL20(2)                                     --------------->AGL15                           <------ZmHOX2a(1)                                    ----------------->AGL1                          ----------->GT1                                    <-----------------AGL2                      ------>MYB46(1)                                    ----------------->AGL3                      ------>MYB83                                    <-----------------AGL3                      --------->MYB52(1)                                    ----------------->AGL2   <---------YAB1     ----------->RAV1(1) -DOF2                    <------ZmHOX2a(2)<---------HSFB2a(2)               --------->ANAC46 -------   ttaggggtttgatgaaattgctgaaacgatccaactcttccatttttagaaaattctcagttcattcttggaaaataaaacccaacaggaaaaaattgat  10321800                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                   <------MYB83                   ---                       <---------ICU4                              <------MYB46(1)                <--                    <---------ICU4                            --------->DAG2                      <--                   --------->ICU4                            ---------->DOF2                     ----      --------->At4g35610                           <------ZmHOX2a(1)                     <---------YAB1      <---------At4g35610                        <-----------RAV1(2)              <---------At5g28300 -->ATHB12 ---------->DOF2  <---------LBD16    ----------->RAV1(1)--------->MYB59<-----------GT1 <---   ttcactgaagctccaaaggtcataatcaattctgggtttgatcaatttgccacaggaaaaactaaaagttggtaacagaaaattcacagttcattataga  10321900            ---------->DOF2     <---------TOE1(2) ------->KAN4(2)                                 ---------->DOF2 ------->ARR14(2)                       <---------ANAC46 --------ARR14(2)                    <---------MYB52(1)                                    <---------ANAC46 -------HSFB2a(1)                  ----------->GT1--------->DAG2      --------->GLK1(2)    <---------ANAC58 ------>HSFB2a(1)            <---------------AtSPL3                  <---------ARR14(2)    <---------ANAC58 ------>KAN4(1)              <---------------AtSPL8                  --------->ARR14(2)   *TSS<------ --------TaMYB80     <------MYB83  --------->ANAC55(2)          ------>ZmHOX2a(1)     <---------ANAC58 -------KAN4(1)      <------MYB46(1)--------->At5g28300   <---------At4g35610      <----------DOF2 ------>TaMYB80     --------->MYB59<---------ANAC55(2)    --------->At4g35610  <---------ZAT18------- ------KAN4(2)   --------->CCA1(2)<-----------------------TaNAC69(2) <---------GLK1(2)<---------ANAC58   atattcgcagggattaaagagataggtcgtagtagtaccgtaacttggagaaaaagttggagcttcctgcagattcttcagagccctttcgtagcgtcga  10322000                                                <------MYB46(1)  ---------->DOF2                                 --------->ARR14(2)    <---------WOX13(1)                                 <---------ARR14(2)   <------------CBF                                 --------->GLK1(2) <---------WOX13(1)                       --------->CCA1(2)        <------MYB83  --------->ANAC58                      --------->ARR11(3)      <--------P      --------->ANAC58                    <---------TOE2(3)        <-------GAMYB  ---------->DOF2    <------------CBF ---ETT(2)          <---------YAB1   <------MYB83 <------------CBF <---------MYB52(2)  ----------->GT1 -->ETT(2)          <---------TOE1(3)<------MYB46(1) --------->ATHB12     --------->MYB52(1)   caaatggggatagagactagttaagatttagagcgaatttggtttggggttggattgattgggaaagcaaagaaccgaagggattgagacggtttatatc  10322100                                          <---------TGA2(1)                                          <---------bZIP60(2)                                          <---------ANAC46                                          >>>>>>>>>>HY5                                          <---------bZIP60(1)                                          <---------O2                                          --------->bZIP60(1)                                          --------->TGA2(1)                                       ---                                          --------->O2                                       <-------                                         ----------->STF1                                   <--------                                       ----------->HVH21                                    <--------                           <---------ARR14(2)                                              --------->ATHB12                           --------->ARR14(2)         <----------DOF2                    <---------MYB52(1)               <----------DOF2       --------->At4g35610                                <-------GAMYB       <-------GAMYB<<<<<<<<<MYB2    <---------At4g35610                   <----------DOF2<---------YAB1      --------->LBD16   <---------ANAC46<---------TGA2(2)            <---------YAB1    <-----------RAV1(1)      ----------->GT1  <---------LBD16 ----------->TGA1   <-----------RAV1(1)       <---------MYB52(1)   aaatgagccggttaagactttggttttcggatagacttgagatgacgtcgtttttgcattatgttgttgttatgtttcttttcttcgttctgttgattgt  10322200                                  <---------YAB1                                 <---------ARR11(3)                                 <---------AHL20(1)                                 --------->ARR11(3)                                                <-                                 --------->AHL20(1)                          ------->TEIL          --                        --------->ANAC58                             ======================HOX2a_HOX2a                        --------->ANAC46                    <---------ARR14(2)                     <-                        --------->ANAC58                    --------->ARR14(2)              ========= ------------>AtSPL8   ------->TEIL                         <---------ARR11(3)      <------ZmHOX2a(1) --WOX13(1)          --------->ZAT14                        --------->ARR11(3)    <---------TOE1(2)<- -ANAC58          ------>ZmHOX2a(1)                      ----------->GT1    <---------CCA1(2)-------- -ANAC58  <-----------GT1     --------->YAB1 --------->ATHB12        ------>ZmHOX2a(2)      ---------   tttgtactcttgtttctctcctctgtacccaagaatatttttgatactgatttgccaagaggtatcttcgatcggtttgaatcttaggaactcgtaaagt  10322300                                             --------->TOE2(3)                                       --------->ANAC46                                       --------->ANAC55(2)                                       <---------ANAC55(2)     --------->ARR11(3)                --------->ANAC58 --------ANAC46                --------->ANAC58    --------->AHL20(2) ------->bZIP60(1)             --------->ANAC58  <---------TOE2(3)                   ------->TEIL --------TGA1a                 --------->ANAC46 --------->YAB1            ------->GAMYB     --------- ========bZIP_DOF     --------->At5g28300 ----------->RAV1(1)       <------MYB46(1)--------->YAB1 --------bZIP60(1)   ----------->GT1   --------->ANAC58             <------MYB83  <---------ATHB12 ->DAG2        --------->HSFB2a(2)    --------->ZAT18           <---------ZAT2  --------->WOX13(1) ->DOF2        <---------HSFB2a(2)    <---------ZAT18           --------->ZAT2<---------ATHB12   gatgtgagttcttgtttttggaacggttaataaacgctagtacgcaacattaatgaaataacacagagcttggtaaccccatcaatgaaactccctaggc  10322400                                                                      <-----------GT1                                                                    --------->HSFC1(2)            ---                                 --------->ATHB12                   <---------HSFC1(2)            ---                                <---------YAB1             --------->HSFB2a(2)   <---------WOX13(1) -                              --------->YAB1               <---------HSFB2a(2)<---------YAB1      <--                            <---------TOE2(3)           <----------DOF2  <----------DOF2          <--                        <----------DOF2           <----------DOF2   --------->HSFB2a(1)         -----                       --------->TOE2(3)  --------->ARR11(3)        <---------HSFB2a(1)      -------- >STY1(1)      <-------TEIL---------->DOF2<---------ARR11(3)       <---------KAN4(2)       <---------LBD16   taactatagaagtaagtttcattttcctttaaagatgatttcaagaacttagctttagcttttggaaggaattttcttttctcattgacactctctggga  10322500  Previous    Next  AGI:  At2g24250.1    Description:  F-box family protein. Identical to F-box/Kelch-repeat protein At2g24250 [Arabidopsis Thaliana] (GB:Q9ZUH0;GB:Q94C28); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G64840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47506.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 10320366    to: 10321990    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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