Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------ICU4    --------->YAB1   <---------YAB1   <---------TOE2(3)  <-----------GT1 --------->YAB1                                               <---------At4g35610 ---------MYB52(2)                                            --------->At4g35610 ------>WOX13(1)    <---------YAB1                       --------->DAG2 --->ANAC58  ------->MYC3            --------->MYB46(3) ---------->DOF2                --------->ARR11(3) --->ANAC58  <-------MYC3       --------->ANAC46 --------->AtLEC2    ----------->GT1   <---------ARR11(3)   caattaacataatcacatgctcattcttggaatcacagaacaaaccttgccatgaacaaaaaggagcagagaagttataagcttgagaagagcttaaacc  10311500           <---------GLK1(1)                <---------ANAC58       --------->HSFB2a(2)              <------MYB46(1)         --------->HSFB2a(2)   <---------ANAC46                     <------MYB83 --------->YAB1       ---------->DOF2   ------->GAMYB   <---------ANAC58       <-----------GT1   <---------ANAC58<---------ANAC58             --------->ARR14(2)   <---------ANAC58  ---------->DOF2   --------->MYB59      <---------ANAC58             <---------ARR14(2)   catttgcttatagaattcagagacaaagaaaccatctgtgtttggttcttggcaatgagattgcttcaagaacagagaaagaaacaatgcataaccccaa  10311600                                                       --------->LBD16                                             --------->ARR11(3)                                             <---------ARR11(3)                                             --------->ARR14(2)    --------->ARR11(3)           -----                                             <---------ARR14(2)    <-----------ARR10            -----                                             <-----------ARR10     <---------ARR11(3)           -----                                             --------->GLK1(2)----------->GT1            --------->ZAT18                                       ----------->RAV1(1)  ---------->DOF2        <---------DAG2   -                                <---------At4g35610   <---------HSFB2a(2)          <----------DOF2  -                                --------->At4g35610   --------->HSFB2a(2)     <---------At4g35610   -                      ---------->DOF2 <----------ID1------>NtERF2  --------->GLK1(2)     <---------ZAT18   aaaccaagaccaagacccattgaagaaagcttggagctaaacaacaaaatctgcctccagaaaaaagaaaatctcactgaagctactttagggtactcat  10311700                                        --------->CCA1(2)                                 ------>ZmHOX2a(2)                                --------->At4g35610                                <------ZmHOX2a(2)                                --------->CCA1(2)                               --------->ARR11(3)                               <---------ARR14(2)                               --------->ARR14(2)                               <---------ARR11(3)                               --------->AGP1                               <---------AGP1       --------->At4g35610    --------->GLK1(1) ---->ANAC58                  <---------GLK1(1)                       <---------ANAC58 ---->AtLEC2                 ----------->ARR10                        <---------ANAC58 ---->ANAC58<----------ID1==============HOX2a_HOX2a              --------->ALFIN1               <---- -------->ANAC46          =============HOX2a_HOX2a        <-----------GT1                   --------- -------->ANAC58          <------ZmHOX2a(1)   --------->DAG2     <-----------RAV1(1)       --------->AtMYB61 -------->ANAC58        <---------TOE2(3)    ---------->DOF2   <-----------RAV1(1) --------->ANAC46   gcaagaaacagttgaagacaaatattaaggagagatctgaagatagaaaaagtgtttgtttaactctgtggtgcttctcaagaacacgagagaccaaagg  10311800                                                                                            *TSS                                                                                            <--------                                                   <---------At4g35610                     --------->ATHB12                                                   --------->At4g35610           --------->ARR11(3)                    <---------ARR11(3)           <-----------GT1                 <-----------ARR10                    --------->ARR14(2)        --------->YAB1                     --------->GLK1(2)                    --------->ARR11(3)      <---------AHL20(2)       <---------ICU4       <---------YAB1                    <---------ARR14(2)     --------->YAB1           --------->ICU4  <----------DOF2                   <------ZmHOX2a(1)      <---------AHL20(2)     <---------YAB1  <---------ARR11(3)            ---------->DOF2            <---------AHL20(1)   ------>MYB83         <---------ARR14(2)        --------->ANAC58               --------->AHL20(1)   -------->P <---------YAB1     <---------AHL20(2) --ZmHOX2a(1)--------->DAG2         --------->AHL20(2)      ------>MYB46(1)      --------->ARR14(2)-- ->DOF2 --------->ANAC58   <---------YAB1--------->AHL20(2)<---------ALFIN1     <---------ARR14(1) <-   acataaaaacaagaaaaaggaggatttttgtcatagattaatatataatattaagcttcccctacctctgattatgacaagagtatctttttttaattgg  10311900                                                        --------->At4g35610                                                        <---------At4g35610                                                    <------MYB46(1)                                                    <------MYB83                                                   --------->MYB111(1)                                                   <---------MYB46(3)                                                 >>>>>>>>>TAC1                                                 <-------GAMYB            <----------DOF2 ----CBF    ---------->DOF2                 --------->ETT(2)              <---------DAG2 ------->GLK1(1)                            <---------ETT(2)        <---------REM1(1) --------GLK1(1)  ---------->DOF2        <---------REM1(1)  ---------->DOF2    --------->YAB1   gaattctgaaataccaaagagaaagagagagagagaagaggtaatgtagacagttggtagcagaaagaagttgaagctttttcataaatgagagaattca  10312000                                  --------------->AGL15                                         <----                                  <---------------AGL15                                      <-------                                  <----------DOF2                                        <----------DOF2                            <---------MYB46(3)            <---------ATHB12            <---------ARR11(1)      <---------GLK1(2)<---------YAB1                 <---------AHL20(2)             <---------MYB52(1)      --------->ARR11(3)--------->ATHB12              --------->AHL20(2)             <---------CCA1(2)   ttcactcagatttttcagaaacagtatcattggtttctttttctagttgaacaaatttaaatcattcattcttctcactgaaaacccgtttcttttttct  10312100                                                                                         -------->ATHB1                                                                                         <---------ICU4                                                                                        <---------ATHB51                                                                                        --------->ICU4                                                                                        --------->AHL20(2)                                                                                     --------->AHL20(2)                                                                                     <---------AHL20(2)                                                                              <---------HSFB2a(2)                                                                              --------->HSFB2a(2)                                                                        <-----------GT1 <---------AHL20(2)                                                                       ==============================      <---------ANAC46                                                 <-----------------AGL1      <---------ANAC58                                             <---------DAG2    --------->AHL20(1)      <---------ANAC58                                             <----------DOF2   <---------AHL20(1)    <---------ANAC46                                            <-----------GT1     --------->AHL20(2) <----------DOF2                                          ----------->GT1    <---------LBD16  <------ ------DOF2            ----------->HVH21                 <---------TOE2(3) <----------DOF2   -------- ----GT1 ----------->GT1      <---------AHL20(2)       ---------->DOF2 <-----------------AG<---------YAB1   tttcttttgtgtggataaaacctgtttgacatttttttttctcttattctgtagagaaaaaggtttaaactttttcactttcggaaataaattattaaag  10312200                                                                        --------->ZAT14                                                                        <---------ZAT14                                                                       <----------DOF2                                                                       <---------------AGL15                                                                       ==============================                                                           --------->ARR11(3)                                                          <---------GLK1(1)                                         <----------DOF2  --------->GLK1(1)                               <----------DOF2           --------->ARR11(3) ======================================================================================MADS_MADS ---TOE2(3)                 <---------ARR11(3)           <---------ARR11(3)      --------->GLK1(1) -->DOF2 <---------YAB1     --------->ARR11(3)       ---------->DOF2   <---------DAG2               <   ttcgggtgtctatgaaagttttttgtaagagttctttattcttctttttattctcaaaagatatcatcttgtactttactgagaaatctatctccattga  10312300           ---------->DOF2       <---------------AGL15       --------------->AGL15      ----------------->AG      ----------------->AGL3      ===================================================MADS_MADS      <-----------------AGL2                      <---------GLK1(2)      ----------------->AGL1                   --------->HSFB2a(2)                             <-----      <-----------------AGL3             <---------------AGL15                            --------->ICU4    --------->ANAC58                     <----------DOF2 <-------GAMYB                --------->MYB46(3)    --------->ANAC58                     <---------DAG2 <---------DEAR3(2)           --------->ANAC58  <---------ANAC58   --------->ZAT18     --------------->AGL15                       --------->ANAC58  <---------ANAC58   <---------ZAT18  <-----------GT1  --------->ETT(1)          --------->ANAC58 =======================MADS_MADS ------->TEIL <---------HSFB2a(2)<-----------GT1--------->ANAC46 -----------HVH21   --------->ALFIN1<----------DOF2    <---------At1g77200       --------->ANAC58   tgtgtcatgccattaaaggagagtgtgcaaagtatgaactttactttttctagattgtcggtagaatttttctacatgtttctaagcaagcactgatttt  10312400  Previous    Next  AGI:  At2g24230.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G58150.1); similar to Os08g0276400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061434.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47204.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Tyrosine prot Range:  from: 10308897    to: 10311892    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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