Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <------ZmHOX2a(2)                   <---------ANAC46                          ----------------->AGL1  --------->ARR11(3)                   <---------ANAC58                          ----------------->AG  <---------ARR11(3)           <----------DOF2                                   <-----------------AGL1 ------->DOF2                 <---------ANAC58                        --------->CCA1(2) ---->YAB1                    <---------ANAC46                        --------->GLK1(1) ----ATHB12        ---------->DOF2     <---------ANAC58              <---------ARR11(3) ->WOX13(1)<---------ICU4     <---------ANAC58     <------ZmHOX2a(1) --------->ARR11(3)        <-----   aaaagatcactcagcattacacaaagactcttgcttttatgacttgtaacagaggaaactaatagtaccaagatatcgagttttccgaaatgggttttca  10291700                                                                                  <----------DOF2                             <------ZmHOX2a(2)                                 --------->ARR11(3)                           <------ZmHOX2a(1)     ---------->DOF2               <---------ARR11(3)                      --------->MYB52(1)       <---------YAB1                --------->ANAC58                    <---------MYB52(2)       --------->At4g35610      <---------GLK1(1)                  --------->ZAT6          <---------At4g35610         --------->GLK1(1) ------GT1     ----------->HVH21          <---------ZAT2    <----------DOF2  --------->ANAC58   caaactcagcaagagaagtgacactaacaggatcagagacatcaagctgatgaaagacaatgctttgatcagaaatctcaagctctttcttcaatgtctc  10291800                                                                                      --------->ARR14(2)                                                                         <---------ARR11(3)                                                   <----------DOF2       --------->ARR11(3)                                          --------->TOE2(3)              --------->ARR14(2)       --------->ANAC58                   --------->TOE1(3)              <---------ARR14(2)       --------->ANAC58   <---------HSFB2a(2)      <---------MYB52(1)   <---------CCA1(2)         --- --------->At4g35610  <---------CCA1(2)<-----------GT1                  <---------GLK1(1) ------>ZmHOX2a(1)   aacagcttcaagcccttgtttctcatctctagatgtcaaaataaccctaatccctttgtttgctaattgtctgcatatctcaaatccaattcctctattc  10291900                      ---------->DOF2                <---------ARR11(3)                --------->ARR14(2)                <------ZmHOX2a(2)                <---------ARR11(1)               --------->ARR11(3)                --------->ARR11(3)               <---------ARR11(3)                <---------ARR14(2)           --------->YAB1               <---------CCA1(2)             ---------->DOF2                 --------->ICU4               <---------ARR14(1)     --------->ARR11(3)                     <---------YAB1 ------>ANAC46 --------->GLK1(1)      <---------ARR11(3)          --------->MYB46(3)       --------->TOE2(3)   cctccagtaactatagcatatctacaaaggccagaactaaaatctaataaagatcagaactaaattcaacaactaagtgaagattgagtcataccttggt  10292000                                                                                *TSS                                                                              <---------At4g35610                                                                              --------->At4g35610                                                                              <---------ZAT2                                                                          --------->O2                                                                          ===========================                                                                          --------->bZIP60(2)                                                                          --------->ANAC58                                                                          --------->ANAC46                                                                          --------->ANAC55(2)                                                                          <---------ANAC55(2)                                                                          --------->ANAC58                                                                          ===========================                                                                          <---------TGA1a                                                                          --------->TGA1a                                                                          <---------O2                                                                     --------->ANAC58                                                                     --------->ANAC58                                                            --------->ANAC58  --------->ZAT2                                                            --------->ANAC58 ------->TEIL            <---------AHL20(2)                   --------->ANAC46  ---------->DOF2        <---------TOE2(3)   ------>ZmHOX2a(1)         --------->ZAT14     --------->ANAC58  =================bZIP_DOF  --------->TOE2(3)<---------TOE1(2)             --------->ANAC58 <---------ATHB12    <------------CBF   gattcctcagccatttttttctaggttttagttcagacaagaatgtttcaaacgaaatgtggaagccaatgaagccacgtagctcagaaattgatgttct  10292100                                                                                   <---------ANAC46                                                                                  ------>NtERF2                                                                                 --------->ZAT18                                                                                 --------->RAP2.6(2)              --------->ATHB12                                                  <---------RAP2.6(2)       ---------->DOF2                                                    --------->YAB1    ----------->GT1       --------->YAB1                                <---------DOF5.7(2)   --------->DAG2         <---------ICU4             <---------YAB1   --------->DOF5.7(2) ---------->DOF2  --------->ZAT18     <---------AHL20(2)             --------->TOE1(3)         ------ ===========bZIP_DOF     <---------ATHB12            --------->ICU4  --------->TOE2(3)  ---------->DOF2 ===========bZIP_DOF ------------>CBF--------->AHL20(2)       <---------ZAT6   --------->At4g35610  -   tggaaaaggtaaagagtgagtggcccaataatctcaccattaaatagttttggttatgattttagtgttttcgttaacataagcggcctataaagaatag  10292200                                   <---------ARR11(3)                                   --------->GLK1(2)                                   --------->ARR11(3)                                              --                             <-----------GT1        <---------At4g35610       <---------GLK1(2)    <-    --------->AHL20(2)  --------->CCA1(2)           --------->At4g35610    --------->YAB1  --------->MYB52(1) ----->GT1             --------->ARR11(3)        ---------->DOF2     ----------->GT1     --------->MYB46(3) --------->DOF2        <---------ARR11(3) <---------AHL20(2) <-----------------AGL3--------->ZAT18---   ttaaaagaaaatagcttagacataagatatataacaaaatctatatatatgtaaagctgaggcgatatatatggtaatcagaatgtgcagaacaaacaga  10292300               <---------ANAC46                                                             ---------     --------->ANAC55(2)                                     <---------At4g35610    --------->YAB1     <---------ANAC55(2)                                     --------->At4g35610 <---------ICU4 ------->AHL20(2)                                 --------->ANAC46               --------->YAB1 --------AHL20(2)                                 --------->ANAC58              --------->ICU4 ------>AHL20(2)         <------ZmHOX2a(1)        --------->ANAC58        ----------->GT1 --------->AHL20(2)   ttaaattatgtgatgcgacttgttggaggaaaactcattatgcagaagaaaaacgctacaaacagctcaaaataatgtgtgaataatgagaaaataatat  10292400                                                                                ----------->GT1                                                                             --------->YAB1                                                                         <---------AHL20(2)                                                                         <---------YAB1                                                                        --------->AHL20(2)                                                                     --------->AHL20(2)                                                                     <---------AHL20(2)                     ----------->GT1                    <---------AHL20(2)--------->YAB1                  <---------AtLEC2            <---------AHL20(2)    <---------AHL20(2)          -----             --------->ATHB12              --------->AHL20(1)    <---------AHL20(2)             <----        <---------YAB1      --------->DAG2 --------->AHL20(2)   --------->AHL20(2)              ----- >AHL20(2) ------->TEIL    ---------->DOF2 <---------AHL20(1)   <---------AHL20(2)              <----   gttatccagtatgaatgtttgaatggtgaaaaagttttaaacaaatattttatagtttttaatagattaatttatataatagtagtaatttgaacaaata  10292500        <---------ZAT6                                              <---------YAB1     <---------MYB52(1)                                     --------->AHL20(1)    <---------At4g35610                                     <---------AHL20(2)    <-------GAMYB                       <---------YAB1      <---------AHL20(1) ---->ARR11(3)                       --------->AHL20(1)    <---------AHL20(2) -----AHL20(1)           <---------AHL20(2)                --------->AHL20(2) ---->AHL20(1)           --------->AHL20(2)                --------->YAB1   ---------->ID1 -----ARR11(3) <---------AHL20(2)   --------->AHL20(2)  --------->YAB1--------->ARR11(3)            -   tttttcagttgtgttattttatcgcaattttttgttaaatatatgattctgaaaacaaaaattatattgtatgattttgttttttttcagaaaactgtaa  10292600  Previous    Next  AGI:  At2g24190.1    Description:  short-chain dehydrogenase/reductase (SDR) family protein. similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT3G61220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39528.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 10290701    to: 10292080    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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