Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->ANAC58                                                                                         --------->ANAC46                                                                                         --------->ANAC58           ------>ZmHOX2a(1)                                                       ------------------       <---------ARR14(2)                                                    <---------At4g35610 -------MYB52(1)                                                          <---------ANAC58 ------->GT1                                             --------->MYB46(3)  --------->At4g35610 -----HSFB2a(2)                                          <---------ATHB12 <---------ANAC58       <--- ---->HSFB2a(2)---------->DOF2                       ------>ZmHOX2a(1)   --------->STY1(2)<---------MYB52(2) --DOF2--------->ARR14(2)                           --------->ANAC46     <---------STY1(2)--------->MYB46(3)   ggtaattcaaatcctccaaaagctccattgacaactcaacatgagacattctctcctcaaccattctcttgtactggctagcttccatagcaagcaacgc  10270700                                                        <---------ANAC58                                             <---------REM1(1)                                             <---------ANAC46                                             <---------ANAC58                                             --------->O2                                             <---------ANAC58                                             --------->bZIP60(1)                                             <---------O2                                             <---------bZIP60(2)                                             <---------bZIP60(1)                                             <---------TGA1a                                           ------>NtERF2<---------ANAC58                        <----                                           <---------TGA2(2)                                    -----                                          ----------->TGA1                                   <-------                                          --------->WRKY12                                  ---------        --------->REM1(2)                 ----------->HVH21        --------->At4g35610      <-------- ---------->ID1                 <---------ANAC58       --------->HSFC1(2)         ------>ZmHOX2a(1) --->WRI1                       <---------ANAC58       <---------HSFC1(2)        --------->TOE2(3) -------DOF2               <---------O2 --------->At4g35610        <---------At4g35610      <--------   tttctcgccttgtagcctaagtatcacagacatggcttcactcgctgacgtagcagtagcttctctctcagcatccaactcttcctcaagtctctgcaca  10270800                                      --------->ZAT18                                      <---------ZAT18                                   <---------ANAC46                                   <---------MYB46(3)                                  --------->ALFIN1                                  <---------AtMYB61                                      --------->ATHB12                                <-----------RAV1(1)                                <---------ARR14(2)                               ------>ZmHOX2a(2)                                   --------->ARR14(2)                              --------->CCA1(2)                                    <---------ARR11(3)  <----------DOF2             <------ZmHOX2a(2)         <-----------ARR10          --------->ARR11(3) -----ARR11(3)               --------->AGP1   --------->ARR14(2)                   <---------ARR11(1) ---->ARR11(3)               --------->ARR14(2)      <<<<<<<<CAMTA3               <---------CCA1(2) --ALFIN1                    <---------ARR11(3)     ------->MYC3              -------->P<---------YAB1 >ZAT14                      --------->ARR11(3)     <-------MYC3              ------>MYB46(1) -ZAT14                      <---------ARR14(2)    --------->ANAC46           ------>MYB83 <---------WOX13(1) -ZAT18      ---------->DOF2 <---------AGP1   <---------ARR14(2)             ------>ZmHOX2a(1)      -   tcttctttcatttcataaagagctattctaagatctgtggtggactcaaatccacgcgtttctaagctatagcttcttcctaccatatctctgattgcaa  10270900                                                       --------->GLK1(2)                       ------                          --------->AHL20(2)           --------->ARR14(2)                     <------                          --------->AHL20(1)           <---------ARR14(2)                  >>>>>>>>>TBF1                          <---------AHL20(1)          <---------GLK1(2)            --------->HSFC1(1)                          <---------AHL20(2)        <---------TOE1(2)              <---------HSFB2a(2)                         <---------ATHB12  <---------ZAT14                         --------->HSFB2a(2)                         --------->AHL20(2)--------->ZAT14                    <---------HSFC1(2) -------->ZAT6 <-----------GT1        --------->MYB46(3)                      --------->HSFC1(2)   aaacactatatgcaaaatttctattcaataaattacttcaaccactatagttcgtagaatctgaagtttttttttgtctaagcttctagagaagaagaat  10271000                                                                                                   --                                                                                                  <--                     --------->GLK1(2)                                         <-----------------AGL1                    <---------GLK1(2)                                          <-----------------AGL3             --------->ANAC58                                                  ----------------->AGL3          <---------ATHB12 <---------YAB1                              <---------STY1(2)          --- <---------YAB1 ---------->DOF2    ----------->GT1                     --------->STY1(2)      ------- --->GLK1(2) --------->ANAC58 <-----------GT1--------->HSFB2a(2) <---------ETT(2)  --------->ARR14(2) ---GLK1(2)  XXXXXXXXXXXXXXXXXXXX>MIR866-5P  <---------HSFB2a(2) --------->ETT(2)  <---------ARR14(2)   cttataaatgaaatcaagaaaagaatctcattataccttgtaaatttgtagaagaacacgagttttgtcgacgagctagtccccaaatttggctcagaaa  10271100                                                                                                    -                                                                                                    -                                                                                                    -                                                              --------->TOE2(3)                   ---             *TSS       --------->DAG2      <<<<<<<<<<<<<<<<<LFY                          <---------AHL20(2) --------->GT1 <-----------RAV1(1)        <------ZmHOX2a(1)   ----------->GT1            --------->AHL20(2) -------ARR11(3)       ---------->DOF2---------->DOF2        ----------->GT1           ------>MYB46(1) ------>ARR11(3) <---------ANAC46<XXXXXXXXXXXXXXXXXXXXXXXMIR836        <----------ID1  ------>MYB83-- --->DOF2   <----------DOF2   <---------ANAC46 <------------CBF  --------->AHL20(2)  <---------MYB59-   gatgtcaaaaaacacttttgtggggaaaagttttgtgtattaaaggacacattggaaactaaaatgttaaaattcgacaaaattagacctaataaatgga  10271200                                                                 <----------DOF2                                                            <---------ICU4                                                           <---------YAB1                                                         --------->YAB1                                                         <--------HAHB4                                                         <---------ICU4                                          <---------WRKY18(1) <---------YAB1          ----------->GT1                ----------->HVH21 --------->ICU4        --------->DAG2               --------->ANAC58   --------->ICU4       ---------->DOF2          --------->ANAC58        <---------YAB1 ----------------------->ANAC81 --------->ANAC46      --------->YAB1             ---------->DOF2 -------->ANAC58                --------->ANAC58    <---------ARR11(3)        <---------YAB1 -------->ANAC58            --------->ANAC58        --------->ARR11(3)       --------->TOE2(3) ------->DOF2               --------->ANAC58       --------->CCA1(1)       <---------YAB1 ------->DAG2               --------->ANAC46       --------->RVE1(1)      <<<<<<<<<<GT-1 ---------->GT1      <-------TEIL    --------->ANAC58<---------YAB1       <---------ARR11(3)   aaaagcaaaaaaagggaaatagtttcattcacacaagccacgcttgaccaaaaatatcatcattatgctttgtctatatcattaaaagtagaaagtttct  10271300                                                         -------->HAHB4                                                         <---------ICU4                                                         --------->YAB1                                                        --------->ICU4                                                      --------->YAB1                                                      <---------ICU4                                                     <---------AHL20(2)                                                     <---------ATHB51                          <-----                                                     --------->ICU4                      --------->ICU4                                                     --------->AHL20(2)              ----------->GT1                                                    <---------AHL20(1)            --------->At4g35610                                              ------>ZmHOX2a(1)           --------->ANAC58  <--------                                            <---------ZAT18     --------->CCA1(2) --------->ZAT2   --                                            --------->ZAT18<---------YAB1 --------->ANAC58 --------->TOE2(3)           --------->YAB1        ---------->DOF2   --------->YAB1<-------TEIL---------->DOF2<--------   taagttgggccatttataaactcattaaactctgagaaagtaatagtcctctaaaataattatgagatacactaccaagaaaagagctggaaatattaat  10271400                              <---------ICU4                              --------->ATHB51                              -------->ATHB1                              --------->ATHB12                      --------->ATHB12                        <---------YAB1 ----TOE2(3)      <-----------GT1      ---------->DOF2 <---------ICU4 -YAB1    --------->ANAC55(2) <--------HAHB4          --------->ICU4  --------->WOX13(1)           -- ----->TEIL   <---------TOE2(3) <---------YAB1  ----------->GT1--------->YAB1                -------- -AHL20(2)<---------ANAC55(2)--------->ICU4 ---------->DOF2   <---------AHL20(2)        --------->YAB1   gaaactttgaatacttaatgttactcattgaattattagaaaaaaggaaagggttaattagtatattatagtcagtcaaatatttctcaaaaatactgat  10271500                                           <---------ARR14(2)                                           --------->ARR14(2)                                           --------->ARR11(3)                                           <---------ARR11(3)                                           <-----------ARR10                   ------->TEIL                                           <---------ARR11(1)           <---------YAB1                                 <---------ANAC58                      <---------ARR11(3)                  ----------->HVH21  ----------->HVH21                 --------->ARR11(3)     <------         --------->YAB1          <---------ANAC46               --------->ANAC46              <------        --------->ICU4           <---------ANAC58--------------------->WRI1   <---------CCA1(2) ----->TEIL   <---------GLK1(1)  ----------->RAV1(2)  <----------DOF2 --------->YAB1        <-------- ->ICU4<---------WOX13(1) <----------DOF2 <---------CCA1(2)   ----------->RAV1(1)       <----------DOF2   gaaactttgaatgatgaaatctgaccttctttttggcctgggacatatcttcttagctttcatcccacaaaatgatatttgaatcttcttcttttttctt  10271600  Previous    Next  AGI:  At2g24140.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G30830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66637.1); contains InterPro domain Protein of unknown function DUF593 (InterPro:IPR007656) Range:  from: 10269634    to: 10271113    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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