Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------MYB52(1)                                             <-------GAMYB                                            --------->MYB55(2)                         --------->YAB1                                            <---------MYB46(3)                       <---------ARR14(2)                                         --------->LBD16             --------------->AGL15                                         ------>NtERF2          <------MYB46(1)      --------->ARR14(2)                                       <---------LBD16          <------MYB83        <---------CCA1(2)                                    <---------ANAC58       <---------AHL20(2)  --------->GLK1(1)                                    <---------ANAC58      --------->AHL20(1)   <---------GLK1(1)             <---------------AGL15 --------->HSFC1(2)     <---------AHL20(1)  --------->ARR14(2)             --------------->AGL15 --------->HSFB2a(1)  <-----------------AGL3<---------ARR14(2)            ----------------->AGL3 <---------HSFC1(2)   =============================MADS_MADS    <--            =========================================================================MADS_MADS ------ --->TEIL ------->TEIL             <---------HSFB2a(1) --------->AHL20(2)     <---------GLK1(2)<----- --TEIL<---------YAB1           <------ZmHOX2a(1)<---------ANAC46   <-----------------AGL3  <--------   atctcgattatgcatccaaatattgtaatctagaggatgcttccggctgttgtttgtttatatatttggttcttcatatggattccctatcttgatgtaa  10230600                                                                                               ------                                                                                      <---------AHL20(2)                                                                                     --------->AHL20(2)                                                                                     --------->AHL20(1)                                                                                     <---------AHL20(2)                                                                                 <---------AHL20(2)                                                                              ----------->GT1  ------                                                                             ----------->GT1 <-------                                                                            ------->MYC3     -------- --------DOF2                                          --------->YAB1       <-------MYC2    --------- ->TEIL                                          <---------AHL20(2)         ------->MYC2    <-------- ------GT1                                      --------->AHL20(2)          <-------MYC3<---------TOE2(3) -REM1(1)   <----------DOF2  <-----------GT1  ------->TEIL<---------ICU4 <---------AtLEC2 --------->YAB1   ctttgtttgtttttcttttgtatttgttaatttacattcacatcgatgtatttaatatcaaaatgactaaattgtgcatgtgttaaatttaatgatatct  10230700       <-----------GT1    --------->YAB1    --------->TOE1(3)    --------->TOE2(3) --------->YAB1 --->YAB1                                 <---------ANAC58 --->TOE2(3)               --------->AHL20(2)                   <---------ARR11(3)          <-------- --ARR11(3)                <---------AHL20(2)          <---------YAB1                      --------->ARR11(3) ->ARR11(3)               <---------AHL20(2)          --------->AHL20(2)     <---------At4g35610 >GLK1(1)       <-----------GT1           <---------ANAC58      --------->ARR11(3)   ----------->GT1 -GLK1(1)--------->ZAT6   --------->AHL20(2)         --------->YAB1         ------->TEIL   <---------ARR11(3)   taataatcttaactgtatttacaactaaaaaaatttcaaatttttcttggcacaattataatccaagataatgcaatgtagctcatctagtaatatcatt  10230800                                                                                   --------->TGA2(2)                                                                                 --------->bZIP60(1)                                                                                 <---------TGA1a                                                                                 <---------O2                                                                     --------->MYB46(3)                                                                    --------->ANAC58    --------->ANAC58                                                                    --------->ANAC58    --------->ANAC58                                                                  <---------WRKY12<-----------HVH21                                                             <---------MYB52(1)  --------->TGA1a                                                            --------->LBD16      --------->ANAC46                                                            <-----------HVH21    <---------bZIP60(1)                                                           <---------ANAC46      --------->ANAC58                                                           --------->TGA1a       --------->O2                    --------->YAB1                         <---------TGA1a       --------->bZIP60(2)                    <---------ICU4                 ==================bZIP_DOF    <---------TGA2(1)                   <---------ATHB51                ---------->DOF2<---------WRKY38(1)   --------->ANAC46  --------->ZAT2   <---------AHL20(2)              ==================bZIP_DOF    --------->ANAC58  <---------ZAT2<---------AHL20(2) ==================================MYC_MYB     ====================  <---------At4g35610   ---------->DOF2   --------->ANAC58 <---------O2          ====================  ----------->RAV1(2)   =============================================bZIP_DOF   <-----------STF1  --------->At4g35610 <---------YAB1      --------->ANAC58 --------->O2  <---------ATHB12--------->TOE2(3) -YAB1         --------->AHL20(2)  <--------P     --------->AtMYB61--------->WOX13(1)  --------->SPL7   tatcagctggaatgagattaaataatgaaagagtatggtaagtgaagccataccaaagctcccgtgagtcaaccaataaacagacgtcatacgtcaatac  10230900                                                                                                  ---                                                                                                  <--                                                                     <---------ZAT18              ===                                                                     <---------ZAT14              ---                                                                     --------->ZAT14              ---                                                                <---------LBD16            <---------YAB1                                                             ------>ZmHOX2a(2)        -------->ATHB1                                                            <------ZmHOX2a(2)         <---------AHL20(2)                            --------->AHL20(2)             <---------AGP1             --------->YAB1                  ------->TEIL         --------->ANAC58    --------->ARR14(2)         -------->HAHB4                 --------->MYB52(1)    --------->LBD16     --------->ARR14(3)         <---------ICU4               --------->MYB46(3)      --------->ANAC58    <---------ARR11(3)         <--------HAHB4               <---------MYB52(2)<---------ICU4            --------->ARR11(3)        --------->ICU4            --------->MYB46(3)--------->YAB1               <---------ARR14(2)   --------->YAB1 <-----      --------->GLK1(1)    --------->CCA1(2)        --------->At5g28300         --------->TOE2(3) <--      --------->CCA1(2)  <------ZmHOX2a(1)      ------------>MYB.PH3(1)       <---------ARR11(3)  ===     <---------ARR11(3)--------->SPL7  --------->ANAC46    <---------ARR14(3) ------->TEIL <---------TOE2(3)     --------->ARR11(3)<---------TOE2(2)--------->LBD16   --------->RVE1(1)  <---------CCA1(2)------- ---------->DOF2------->GAMYB<---------YAB1     --------->MYB52(1)   <-------TEIL    <---------ATHB51 =======================MYC_MYB  <---------AHL20(2)----------->GT1 <---------SPL7    <---------YAB1<- ===========bZIP_DOF --------->TOE1(2)<---------LBD16  ---------->DOF2<---------ALFIN1--------->ATHB51   ccaaaaagatatcaacaacgaaccgtaggatataataaatcccgcaaaataaacggttaaagatctcgcggtacactctgtatcttaattattaagattc  10231000                                         <---------ANAC55(2)                                         <---------ANAC58 <---------DEAR3(1)             <---------MYB46(3) ------>TGA1a               <---------TOE2(3) -------TGA1a         <---------YAB1     <---------ANAC58 =====================================MYC_MYB                                                   ----- ------>O2        ------>MYB83 <--------P<---------ANAC46                                       ----- ------>ANAC46    ------>MYB46(1) <---------ANAC46                              --------->ARR14(2) --TEIL --------->ANAC46 *TSS <-------GAMYB                                     <---------ARR14(2) -------O2--------->ANAC46<-----------RAV1(1)                          --------->ANAC58        ------ =======================================MYC_MYB<---------HSFC1(2)      --------->ANAC58       <------ -->CCA1(2)  <---------ALFIN1<---------MYB46(3)--------->HSFC1(2)      --------->ANAC46------>ZmHOX2a(2) ----------HVH21<---------MYB111(1) --------->MYB52(2)          <----------DOF2 <-----------ARR10<---   acgtcgctggacacaacacctactatatttgtggttgtttgtttcgtgaagcttctctcttcttctctttttcaagtcatcaaatctgatctaatctccg  10231100                                    ===============================HOX2a_HOX2a                                    ------>ZmHOX2a(2)                                    ============================HOX2a_HOX2a                                   ================================HOX2a_HOX2a        <---------ANAC46           =============================HOX2a_HOX2a        <---------ANAC58          --------->AGP1        <---------ANAC58          <---------ARR14(3)   --------->MYB52(1)     --------->At4g35610                              ======================RAV  <---------AHL20(2)      <---------At4g35610                  --------->ETT(1) <---------AHL20(2)    <----------DOF2             <<<<<<<<<TBF1 <------NtERF2           --------->ZAT18 --------->AHL20(2)  <---------ZAT2<------ZmHOX2a(2)         <-----------HVH21        <-------GAMYB ---->LBD16       <---------ANAC46--------->ARR14(2)        ===========================RAV ---->At5g28300   <---------ANAC58<---------ARR11(3)        ------>ZmHOX2a(1)         --------->At4g35610 --->ANAC46  <---------MYB46(3)   <---------ARR14(2)        <-----------RAV1(1)      <---------MYB46(3) ---LBD16    --------->MYB111(1)  --------->ARR11(3)      ----------->RAV1(2)        <-----------RAV1(1) ------MYB52(1)   <---------ANAC58--------->ARR14(3)     ------>ZmHOX2a(1) <-----------RAV1(2)-------   taaattaatggcgagtagttgcgagctttgctgcgagatcttcatcgcaattcttcttcctcctgtcggagtttgtctcaggcatggctgttgcactgta  10231200                                                                                          <---------AHL20(2)                                                                                         <---------AHL20(2)                                                                                    <---------MYB52(1)                                                                                   --------->At5g28300                                       <---------------AGL15                       <-------GAMYB                                  <---------ZAT2                                  ----------->GT1                                  <---------At4g35610                            <---------TOE2(3)    <---------CCA1(2)       <-----------HVH21                                    <---------TOE1(3)    <---------At4g35610    <----------DOF2       --------->GLK1(1)               <---------ANAC46 <-------TEIL      ------>ZmHOX2a(2)   --------------->AGL15                --------->ATHB12 -->At5g28300     <---------GLK1(1)<---------GLK1(2)      --------->TOE2(3)--------->ICU4--------->AHL20(2)   agtttcatctctctctatcgatctctgaactttcacagcttcttatttcagaaatcgaaaccgtagttgaaattgaattgattacggttatttaaattga  10231300                            <---------ATHB12                   --------->LBD16                 <---------LBD16                                 <---------YAB1              <----------DOF2--------->YAB1                      <---------AHL20(2)            --------->LBD16------>MYB83                         --------->AHL20(2)          <---------LBD16  ------>MYB46(1)       <------ZmHOX2a(2)     --------->ZAT18      --------->WOX13(1)    <---------ARR11(3)     <---------ZAT18    --------->MYB46(3) --------->ALFIN1     --------->AHL20(1)  <---------ANAC58<---------LBD16    <---------YAB1--------->WOX13(1)           ----------->GT1 -----  <---------ANAC58<---------ANAC46<---------YAB1--------->ARR11(3)        <---------ANAC46   -------- <---------MYB46(3)--------->HSFB2a(2)  ------->TEIL            <---------AHL20(1)    ---------->DOF2   aattggttgcactccggtttacgggaaccaatcaatatgatgaatgtggagatcaattactgaaaatataattgtggtgtttttgttaaaaagaaacact  10231400                         <---------AHL20(2)                        <---------AHL20(2)                <---------AHL20(1)                --------->AHL20(2)                                          --------->ARR11(3)                --------->AHL20(1)                                          <---------ARR11(3)                <---------AHL20(2)      ------>ZmHOX2a(1)            <------MYB83 --------->MYB52(1)     --------->AHL20(2)                           <------MYB46(1)              <-- ---------->AGL15<---------AHL20(2)    <---------MYB59              <---------TOE1(2)             <-- ->ZAT6    --------->AHL20(2)       <-----------GT1                <--------P    --------->ATHB12<---   aattaagggactaaaaaataaaatttttaaattttgtttttcctaactcatgtttttttggtttaacttgtaggttgagttcttcatttgtttgatactg  10231500  Previous    Next  AGI:  At2g24040.1    Description:  hydrophobic protein, putative / low temperature and salt responsive protein, putative. Identical to UPF0057 membrane protein At2g24040 [Arabidopsis Thaliana] (GB:O82232;GB:Q53XD6); similar to hydrophobic protein, putative / low temperature and salt responsive protein, putative [Arabidopsis thaliana] (TAIR:AT4G28088.1); similar to unknown [Populus trichocarpa] (GB:ABK93775.1); contains InterPro domain Protein of unknown function UPF0057; (InterPro:IPR000612) Range:  from: 10231025    to: 10231710    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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