Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------ANAC58                                           --------->YAB1                                          <---------ATHB12                          --------->ARR11(3)    <---------ANAC58            --------->ANAC58                --------->ANAC46   --------->WRKY38(1)    <-----------GT1   --------->ANAC58    <----     ----------->GT1  ---------->DOF2   <---------At4g35610     <----------DOF2       --------->KAN4(2) ----TEIL     <-----------GT1      --------->WRKY12    --------->CCA1(2)----------->RAV1(1) <--------   tcaaaaattgttatatatacctcacaaagttctcgcgttggccactgatgacttgagatttgactccttttgggccacaagtatcgaacatactctttta  10211100                                                                                             ------>MYB46(1)                                                                                             ------>MYB83                                                                                           --------->TOE2(3)                                                                                           <---------MYB59                                                                                           <---------MYB46(2)         ------>ZmHOX2a(1)                                                              <-----------GT1        --------->TOE2(3)                                              <---------At4g35610-----------     ------->TEIL                    --------->YAB1              <----------DOF2    <------ZmHOX2a(1)  <---------YAB1                  --------->YAB1             ------->TEIL   --------->YAB1<---------ANAC55(2) -------GT1          <----------DOF2<---------YAB1         <---------ZAT18 <---------YAB1<----------- --DOF2----------->GT1    <----------ID1          --------->GLK1(2)    --------->At4g35610--------->ANAC55(2)   actcatgaatcctaaaaaaactgcttttgagacaaattatcatcaagaagagaatcactagcgaacccttttcagctataattttaggagttacctaatt  10211200                                                                           <---------ICU4                                                                          <---------YAB1                                                                 <---------At4g35610                                                            <---------ANAC58                                                            <---------ANAC58                       --                                                            <---------ANAC46          --------->ARR14(2)                                                            <---------ANAC55(2)       <---------GLK1(2)                  <----------DOF2                      <------MYB46(1)   <-----------GT1          ---         <------ZmHOX2a(1)                <---------ANAC58  --------->ANAC55(2)       <---------ARR14(2)      <------ZmHOX2a(1)                   <---------ANAC58 --------->MYB52(2)   <-----------GT1   <--    <---------TOE2(3)                --------->ATHB12  ----------->GT1  <-----------GT1 <-------TEIL <---------MYB52(2)          <-----------ARR10         <------MYB83    <---------AHL20(2)    -------- ------>AGL1    ---------->ID1  ---------->DOF2       <---------TOE2(3)--------->AHL20(2)--------->YAB1 ------AGL1    <-----------GT1<---------ATHB12        --------->MYB59 <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   ggaactaaggaggagtttttctttttttgcaaatcaaagcgattgggttctgaaattaggttacttgagctaatttatcatttcaccagattcataaaag  10211300                                                       ------>MYB46(1)                                                       ------>MYB83                                                     <---------MYB59      --------->AHL20(2)                            --------->MYB46(3)  <---------AHL20(2)                               ------->TEIL  --------->AHL20(2)                          --------->MYB52(1) --------->GT1                             --------->ANAC46                        --------->ARR14(2) -------->GT1                        --------->At4g35610                           <---------ARR14(2) -------YAB1                         <---------At4g35610                  --------->TOE2(3) -->DOF2       --------->LBD16   <----------DOF2<---------MYB52(2) <---------TOE2(3)   ---------->DOF2   atgataaatttaaaacccagaaacaaaaatcgaaactttagctacacaaaacgaaccaaactcatttctaagatagcctaaatcgaatccaaagtcaaac  10211400                                                                                    <----------------                                                                                    <------NtERF2                                                                                   ------>NtERF2                                                                                  <---------RAP2.3(3)                                                                                  <---------ATERF1(2)                                                                                  <---------DEAR3(1)                                                                                  --------->ATERF1(2)                                                                                 --------->RAP2.6(3)                                                                                --------->MYB52(1)                                                                               ----------->HVH21                                                                             <---------At4g35610                                      <------ZmHOX2a(1)                      --------->At4g35610-----                                <-----------RAV1(2)                         --------->GLK1(2)   -----                               <------ZmHOX2a(2)         <---------ARR11(3) <-----------ARR10--------                               ==============HOX2a_HOX2a --------->ARR11(3) <---------ARR14(2)-------                     <---------At4g35610           >>>>>>>>>TBF1            ------->TEIL     <-------                   ---------->CDC5 <------ZmHOX2a(1)  >>>>>>>>>TBF1         --------->ARR14(2)-------            <---------ATHB12  --------->ARR11(3)>>>>>>>>>TBF1       <---------At5g28300   >>>>>>>>>TBF1   aattgcaaactctaatcaagctcagcgactgagatcaggaggaacatgaagaagaagaagaacttacagttacagtcgaatctgacggcgaagaagaaac  10211500         --------->ZAT18  >>>>>>>>>TBF1 -----WRI1 ---->ANAC58                                                                <------------CBF ---->ANAC58                                                              <---------AHL20(2) ->ARR14(2)                                                               --------->AHL20(2)       -- -->MYB52(1)                           ---------->DOF2        <---------ANAC58         <<<<<<<<<TBF1 --ARR14(2)      ----------->GT1 <------NtERF2                <---------ANAC46    <----------DOF2  <- ----------------->ANAC81--------->MYB52(1)    *TSS           <---------ANAC58 <-----------GT1   <---   ggaagaagaagagcacaaattgttaaaaaacgggcagagaagaaagtgaaggtgtcttcttctgtcttgtgtccaaaaaattgactttcttcttcttgct  10211600                --------->ANAC46               --------->MYB46(3)              <---------ALFIN1          --------->TCP23          --------->TCP15(2)         <---------TCP20         --------->PCF2                    --------->ATHB12         <---------TCP15(1)                --------->YAB1                         --------->YAB1        <-----------HVH21             --------->AHL20(2)                         <---------YAB1      <---------DEAR3(2)  --------->At4g35610                      <----------TaMYB80   <-----------HVH21      --------->ZAT14  <---------ICU4          --------->CCA1(2) --------------->AGL1     <---------At4g35610                      <---------GLK1(1) ----------------AGL1  ------>ZmHOX2a(1)  <---------ATHB12         --------->GLK1(1)    <-----------GT1 ------SPL7 <---------ALFIN1       <----------DOF2                ---------->TaMYB80 <---------ICU4   gtccgagtcgggtcccacccgcttcctgtgctgtctccttttaaatcattacatgtaagaaatatagggatatactacaaactataattttcactgcttc  10211700                                                                                               <-----                                                                                               <-----                                                 <---------AHL20(2)                            ------                                                 <---------YAB1   ------>NtERF2                <-----                                         <---------AHL20(2)      --------->ANAC58    <---------AHL20(2)                                         --------->AHL20(2)      --------->ANAC58    --------->AHL20(1)                                     <---------AHL20(2)          --------->ANAC46    --------->AHL20(2)                                     --------->AHL20(2)          --------->bZIP60(2)--------->AHL20(2)                  <---------ARR11(3) <---------AHL20(1)        <---------ALFIN1     <---------AHL20(2)                  --------->ARR11(3) --------->AHL20(1)     --------->PCF2       <---------AHL20(2)                  --------->ARR14(2)--------->AHL20(2) <------MYB46(1)          --------->AHL20(2)  -         <---------YAB1             <---------AHL20(2) <------MYB83             <---------AHL20(2)---       <----------DOF2          <---------AHL20(2)    <---------TOE2(3) <---------AtLEC2       <-----    <-----------GT1             --------->AHL20(2)    --------->MYB59 --------->AtLEC2        <------   tatattttactttgattcaatatctactacttaaaaaaataaattatatgtataattaggttgtcccacgccatgcatggaattaaataatttgtttacg  10211800     ----------->GT1 ----ANAC58 ----ANAC55(1) --->ANAC55(2)            --------->ZAT18          <---------WOX13(1)                       <-------- ----ANAC55(2)            <---------ZAT18          <--------P                            ----------->GT1 -------->YAB1       <----------DOF2             <---------MYB46(3)                  ------->GAMYB ---->TEIL     <---------YAB1                   <---------TOE2(3)                   --------->ANAC46 ----ANAC58    <---------TOE2(3)                <---------YAB1               --------->At4g35610 ---TOE2(3) <---------AHL20(2)    --------->AHL20(2)   <---------YAB1        --------->GLK1(1)   tatcaaaatgttatattatggttctttgtccacaaaaaaaatgtgatactatggttgataatagatgctataagagagcatctccaacgcagggttttaa  10211900                                                      --------->AHL20(2)                                             <---------YAB1                                           --------->YAB1      <-----------RAV1(1)               --------->WOX13(1)      <---------MYB46(3)               --------->AHL20(2)  --------->ICU4                       <---------AHL20(2)           <---------ANAC58 --DOF2     <---------ZAT18           --------->AHL20(2)            <---------ANAC58   tgcaatatttgttgggctctcttgataatttgaattacaaataaatcaaaattgaattaaactgagagaggcgtttctctgaagagagtttttgagggaa  10212000  Previous    Next  AGI:  At2g23980.1    Description:  ATCNGC6 (CYCLIC NUCLEOTIDE GATED CHANNEL 6); calmodulin binding. Identical to Probable cyclic nucleotide-gated ion channel 6 (CNGC6) [Arabidopsis Thaliana] (GB:O82226;GB:Q9XFS4); similar to ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5), calmodulin binding / cyclic nucleotide binding / potassium channel [Arabidopsis thaliana] (TAIR:AT5G57940.1); similar to ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5), calmodulin binding / cyclic nucleotide binding / potassium channel [Arabidopsis thaliana] (TAIR:AT5G57940.2); similar to ATCNGC9 (CYCLIC NUCLEOTIDE GATED CHANNEL 9), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana Range:  from: 10208184    to: 10211547    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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