Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                               <-----                                                                                               ------                                                                                             <-------                                               --------->At4g35610                          <--------         <---------ARR14(2)                    <---------At4g35610           <---------ANAC46--------  --------->At4g35610                      <-----------HVH21             <---------DAG2     ------->PIF5  <---------At4g35610                     --------->WOX13(1)             <----------DOF2    <-------PIF5  <---------ZAT2                      --------->GLK1(1)               ------->TEIL --------->YAB1  --------->ZAT2                      <---------GLK1(1)              <-----------GT1       --------->ZAT2 ------->At4g35610                    --------->CCA1(2)           --------------->AtSPL3   <---------ZAT2 --------At4g35610 --------->YAB1    <---------ARR11(3)           --------------->AtSPL8 <-----------RAV1(2) ---At4g35610 --------->ANAC55(2)    --------->ARR11(3)     <-------TEIL<---------DAG2   ============   gagcagctgcagatttaagtatcagaatcactctgaagagatatcagtcagataacatcatgttcatttatgtaccttttcgtaaacataagcaggtggg  10035500                                                                                 --------->KAN4(2)                                                                                --------->HSFB2a(1)                                                                                --------->KAN4(1)                                                                                <---------HSFB2a(1)                                                                                <---------KAN4(1)                                                                                <---------GLK1(1)                                                                                --------->GLK1(1)                                                                                <----------TaMYB80                                                                               <---------KAN4(2)                                                                               <-----------ARR10                                                                               ---------->TaMYB80                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                                                           <---------At4g35610                                                               --------->ZAT2  <---------ARR14(2)                                                               <---------ZAT2  --------->ARR14(2)       <---------ANAC58                                        <---------At4g35610       --------->ETT(1)                                        --------->At4g35610       <---------ANAC46                                 <---------ZAT2  --------->ZAT18     <-----------HVH21                                  --------->ZAT2  --------->ZAT14 -MYB46(1)           <-----------HVH21                  --------->At4g35610<---------LBD16 -MYB83<---------ANAC58   ---------->DOF2         --------->ANAC46     --------->ALFIN1 ----->GT1        <---------At4g35610             --------->ANAC58    ------->PIF5 -P <-----------RAV1(1)<<<<<<<<<WRKY18            --------->ANAC58    <-------PIF5    ------>ZmHOX2a(1) -MYB52(1)        --------->At4g35610  <------NtERF2    <---------At4g35610--------->At4g35610 ->ALFIN1      ---------->DOF2        --------->RAP2.6(2)  <-----------HVH21<---------ANAC46 ===============RAV ----------->GT1 --------->RAP2.6(3)--------->GLK1(2)<---------ZAT14           ---   tttattgtgtcgggcatgaaagctgtcaaaaagacaatagcggcaatcttacaagcgaagctgtcagcagcaagtgcagcggatattcctcccatgctat  10035600                                     --------->ZAT2                                     --------->At4g35610                   <-----------HVH21 <---------At4g35610             <---------DAG2          <---------ZAT2       --------->YAB1  <---------At4g35610       --------->WOX13(1)       --------->ANAC58      --------->MYB46(3)        --------->ANAC58       <---------ATHB12   --------->MYB46(3)  --------->At4g35610        --------->ANAC46                         <---------ALFIN1   --------->REM1(1)   ----------->RAV1(2)        --------->ANAC58                 ------->TEIL ----------->RAV1(1)<---------MYB52(1)     <---------GLK1(2)                      <---------GLK1(2) ------>ANAC46     <-----------TGA1<---------ZAT18--------->ANAC58          <---------GLK1(2) <------   gagcaacaacaatcaccttaccgtcatctgagccaagcgagctcagaaactcaagcaatggtttgcagtaatcgttcagagtctgaatctcttccacttt  10035700                                   ----------->HVH21                                   <------NtERF2                                  <-----------HVH21                                  <---------RAP2.6(3)                                  <-----------TGA1                                  ------>NtERF2            <---------At4g35610                                 <---------ATERF1(2)       ----------->RAV1(2)                                 --------->ATERF1(2)       --------->ZAT2                          <-                            --------->At4g35610            <---------ZAT2                          --                           <---------ALFIN1                --------->At4g35610                 <-----                         <------ZmHOX2a(2)               <-----------RAV1(2)                 --------                         --------->CCA1(2)    <---------ANAC58 <---------ANAC58              <-------                        --------->ARR11(3)    <---------At4g35610                            ------->PIF5                        --------->AGP1<---------ALFIN1--------->AtMYB61                      <-------PIF5            ----------->HVH21    --------->RAP2.6(2)  ------->GAMYB                         ---------          ----------------->AGL1 <---------bZIP60(1)  ===============================================          ----------->RAV1(2)  --------->ZAT14<---------ANAC58 <---------ANAC46             <--------        <-----------GT1 --------->ARR14(2)    --------->At4g35610    <-----------GT1        =========  --------->ICU4        <---------ARR14(2)    <---------ANAC46 <---------ANAC58             ---------  <---------YAB1        <---------ARR11(3) ----------->HVH21  <-------TEIL                  <-------- ----DOF2 ----------------->AGL2 --------->bZIP60(1) --------->MYB46(3)             <-------TEIL   --   ggtcatgtttatacctgatgcagcaagatccactgccgtcacacagtgacctgcaacctccagctgcgttttcaccttgtcccaagtccatgccccgtgg  10035800 --------->ANAC58 --------->ANAC46 --------->ANAC58 --------ALFIN1 ------->ANAC58 ------HVH21 ->LBD16                                                                                           -- ----HVH21                                                                              ----------->GT1 >O2                                                                              <---------AHL20(1) =MYC_MYB                                                                         --------->AHL20(1) -O2                                                                             <---------------AGL15 ==================================bZIP_DOF              *TSS<---------At4g35610 --------------->AGL15 >TGA1a      --------->ZAT18                  <---------ANAC58                  <-----------------AGL3 -TGA1a      --------->At4g35610 <---------YAB1 <----------DOF2                 ===================== ------->ANAC58         <----------DOF2       <---------ANAC58             --------->ZAT6 <--------P   cacaccccatggatgagcacaaaccgcttctggttcttattctccattgcctttcttactctcagcatcttggttcaacactaatatatatggtaagttt  10035900                                                            <---------MYB52(1)                                                           <-------GAMYB                    ---------                                                          <---------ZAT6                   <---------ATHB12                 <------------CBF<---------AtMYB61    --------->WRKY38(1)             --------->ANAC58         <---------ICU4    --------->MYB52(2)         --------->WRKY12         --------->YAB1       --------->GLK1(2) <---------MYB52(1)         <------------CBF      ----------------->AGL3    <---------GLK1(2)   <-------GAMYB          --------->GLK1(1) <---------GLK1(1)    --------->ANAC58 --------->RAV1(1)     <---------ZAT6<---------MYB46(3)<---------WRKY18(1)----------------->AGL2 ===========================================================================================MADS_MADS   cccacagataatctttgcatattgactgttagtttttggtcgttctctgagttccattgactgttagatttctcatttcaaatatagtaagcaataaagt  10036000                                                                  --------->WRKY12                    --------->HSFB2a(2)                          <---------WOX13(1)                    <---------HSFB2a(2)                         <---------ANAC58                 ------>ZmHOX2a(1)                              <-------GAMYB                 <----------DOF2                                <---------ANAC58               ------>ZmHOX2a(2)                               <------MYB46(1)              <------ZmHOX2a(2)                                <---------MYB46(3)             <---------ARR14(2)                                <------MYB83                    <-----             --------->ARR14(2)                                --------->MYB55(2)             -------             <---------ARR11(3)                            <-----------RAV1(1)                <------             --------->ARR11(3)                    <-------TEIL--------->MYB52(2)             <------           ----------->ARR10                      --------->CCA1(2)                        ---------- ------->TEIL<---------GLK1(2)              <---------ATHB12  <---------AtMYB61 <---------ALFIN1----- ->DOF2  ---------->DOF2     --------->ANAC55(1) <---------ARR11(3)<---------WRKY18(1)   <--------P   ctgaacctttagaaagatccttttagaacacacttaattgtatcaaatcaagatacattttttgttggttgacttgaagactccacatgaggtagtttgt  10036100                                                 --------->ALFIN1                                        <---------ZAT2                                        --------->TGA1a                                        <---------TGA1a --GAMYB <---------GLK1(1)              ==============================================bZIP_DOF -->MYB52(2)<---------ANAC46            --------->ZAT2 -----RAV1(1)                         <-----------RAV1(2)                  ---------->DOF2 ---MYB46(3)<---------ANAC58       ----------->HVH21                      <------ZmHOX2a(1) -->MYB.PH3(2)   --------->ICU4   <-----------HVH21               <---------ARR14(2)            ----- ----->ID1  <---------ANAC58 ----------->HVH21 <---------O2       --------->ARR14(2)  ---------->DOF2   tgccatgttggatttcgtagtaattgtttcagtgactgtcacaggtgagaagtggccatagtatttagtatctgcaggaaagtttttggaaagagagatt  10036200                                                             --------->CCA1(2)                                                          ----------->GT1                   <--------                                                    <---------AHL20(2)                    --------->YAB1                                          --------------->AtSPL8                   <---------YAB1                             --------->ATHB12      --------->AHL20(2)         <------ZmHOX2a(1)       ---------->ID1      <----------DOF2--------------->AtSPL3              ======================= ------>GT1     ---------->DOF2           <---------------AtSPL8        --------->GLK1(2)<---------YAB1   gtaaaatttgtagtttttgaaagtgaatgctttattggagaagagatgtacaaatttatagggatacaatggagagtctaggaatatgtttattatagtt  10036300                                  --------->AHL20(1)                      <---------ICU4              <-----------GT1     <---------AHL20(2)          <---------AtMYB61     --------->ARR11(3)           <---------AHL20(1)     <-----------RAV1(1)                        <     <---------ARR11(3)           --------->ARR11(3) <---------DAG2                                <-   <---------YAB1    <---------ATHB12                <----------DOF2                               -- -YAB1 ------>ZmHOX2a(2)<---------YAB1              <---------ANAC58          <---------ICU4      --- =============HOX2a_HOX2a     --------->HSFB2a(2)   <---------ANAC58         <-------TEIL      ------   ctcttatgatctctatttactaaatcattcttctaaaatattgtttctcatatggctttttgttgtggtgaagttgaaattcattactaatttgcagtaa  10036400  Previous    Next  AGI:  At2g23550.1    Description:  hydrolase. similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT2G23580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41818.1); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 10034666    to: 10035857    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g23560.1    Description:  hydrolase, alpha/beta fold family protein. similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT2G23580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42790.1); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 10036355    to: 10037462    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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