Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                 ----                                                                                          ------->MYC2                                                                                          ------->PIF5                                                                                          <-------MYC2                                                                                          <-------MYC3                                                                                          <-------PIF5                                                                                         <---------O2                                                            --------->ANAC58             --------->ANAC46                                                       --------->AtLEC2                  --------->O2                                                      --------->TOE1(2)                  --------->TGA1a                                                    ------->TEIL===================================bZIP_DOF                                                  <---------ZAT18                   <---------ARR14(2)                                                 <---------ANAC58            ======================MYC_MYB                                                --------------->AtSPL8<---------ETT(2)   <---------TGA1a                                             <---------ANAC46   ---------->DOF2     --------->ARR14(2)                                          <---------ATHB12  --------->ANAC58 ------->GAMYB------->MYC3                                     <<<<<<<<<<<<<<<<<LFY ---------->DOF2   --------->MYB46(3)   <---   --------->YAB1                    >>>>>>>>>>>>>>>>>LFY =========================================bZIP_DOF ->TEIL   <---------LBD16      --------->AHL20(2)<---------ANAC58 --------->DAG2    <---------ARR11(3)   caaaatcaaaactctggattgaacacacctaaaaaaaatgaccaatggtttgtgtacctgcaaagcaaaaggtcgataaccatcaatatccacgtgaagt  10020200                                                                                              -------                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                                                           <---------ALFIN1                                                                                      --------->ANAC46                                                                                      --------->ANAC58                                                                                      --------->ANAC58                                                                                    <---------DOF5.7(2)                                                                                   --------->REM1(2)                                                                                  --------->DOF5.7(2)      --------->AHL20(2)                                                         --------->LBD16 <---------------------WRI1     <---------GLK1(2)                               <---------ANAC58 -------->AtLEC2        --------->LBD16                                         <---------ANAC58 -------->ANAC58    --------->ARR14(2)                                          <---------ANAC46 -------->ANAC46    <---------ARR14(2)                                         <-----------------AGL1 -------->ANAC58   <---------CCA1(2)            ---------->DOF2               -------->P   --------->ANAC46 ----->ZAT14      <---------SPL7--------->ARR14(2)        <---------ZAT2   --------->At4g35610<------ ----TEIL        --------->RAP2.6(2)     <---------GLK1(2)--------->At4g35610 <---------At5g28300----   acaggcaaaaaattcaaggccgtatccgagtcaatattctctagattcttcaaagaagagagctcgacatttgcagtagctaccgtgaacggcacaccac  10020300                  --------->At4g35610         ----------->RAV1(1)         =====================RAV        ------>ZmHOX2a(1)         <---------ALFIN1      <-----------HVH21       --------->ABI4(1)--------->HSFC1(2)                           ----------->GT1       ------>NtERF2    <---------At4g35610                        --------->ARR14(2)  ------>ZmHOX2a(2)      --------->DEAR3(1)--------->HSFB2a(1)                        <---------ARR14(2) <------ZmHOX2a(2)      --------->ANAC46  <---------HSFC1(2)                  ---------->DOF2          --------->ARR14(2)      --------->DREB2C(2)     --------->LBD16            <---------HSFB2a(2)         <---------ARR14(2)   <---------ALFIN1 ------->GAMYB      ----------->RAV1(2)--------->LBD16            <---------ARR11(3) <-----------HVH21<---------At4g35610  <---------ANAC58  --------->HSFB2a(2)         --------->ARR11(3) -->AtMYB61       ----------->RAV1(2)  <---------ANAC58  --------->LBD16    --------->ANAC58 ---ALFIN1 <---------ALFIN1--------->MYB52(1)------>NtERF2--------->ANAC46  --------->ANAC58 ----->AtMYB61   --------->MYB52(1) <----------DOF2     <---------LBD16     --------->ANAC46---------   ctccatcaccgccacaactcaactgaagcttccggtcactttcctgccgcttcaaactccccgaaagcggatagtaatacccaagaagatcggataaagc  10020400                                                                                                    <                                                                    ----------->GT1                 -                                      <---------HSFB2a(1)         <---------ANAC46              <----                               --------->At4g35610      ----------->GT1                     ---------                             <---------ICU4             <---------ANAC55(2)                <------ZmHOX2a(2)                            <---------YAB1              --------->ANAC55(1)                <---------YAB1                   <---------DEAR3(1) --------->HSFB2a(1)         <---------ANAC58        --------->ARR11(3)              <-----------RAV1(2)--------->ANAC46       --------->ANAC58                  <---------ARR11(3)            <-----------HVH21--------->YAB1             --------->ANAC46                 --------->YAB1    --------->ANAC58      --------->YAB1                --------->ANAC55(2)              <------ZmHOX2a(1)    --------->ANAC58 <-------GAMYB--------->At4g35610   --------->ANAC58         -------------------- ->DOF2---------->DOF2   <---------YAB1         <----------DOF2   <---------ANAC58      --------->ICU4   ctccctaagcaaagcttcaggccggttatcatcatcagcaacgttcttggctttgaaaacgtaacatgccttgtaaataacttcgttgtaaggatcattg  10020500                                                                              ---------->DOF2  --------->ALFIN1          <------ZmHOX2a(1)                             <---------------AGL15 ---------ANAC55(2)   <-------GAMYB                                  --------->HSFB2a(2)      ------- -------->ANAC55(2)  --------->MYB52(2)          ----------------->AGL1   --------------->AGL15 -------HVH21        <---------MYB46(3)          =========================================MADS_MADS >ATHB12          ------------>MYB.PH3(2)        ----------------->AG<---------HSFB2a(2)    ------->TEIL ->WRI1   ----------->GT1 <---------TOE2(3)    <-----------GT1 <-----------ARR10      ------>ZmHOX2a(2)   tcaagtgttgaaaggttaagagtttgttgaggaatatgttttgagggttttaccatttcggtgagcatcttctcgaccattaaagggatcgatgaaccta  10020600                                                                                  --------->DAG2                   <---------AHL20(2)                                            ---------->DOF2                  <---------ICU4                                        <-----------TBP  --------->ARR14(2)                                                   <----------DOF2  <---------ARR14(2)                                        --------->ZAT14    >>>>>>>>>GATA-1  <---- -->TOE2(2)   <---------AHL20(2)    --------->YAB1 --------->ZAT18   ---------->ID1         <--------   tgtgaatcggcatgttttaatttttatgtgtttgacaaatataagtgtataagtactctaagaacactcttgtcttttatagataaagttttggcttcat  10020700                                                                                         <---------AHL20(1)                                                                                         --------->AHL20(1)                                                                                         --------->AHL20(2)                                                                               <---------ALFIN1                                                                              <---------ZAT14                                                                              <------NtERF2             --------->TOE1(3)                                                --------->ZAT14             --------->TOE2(3)                                                --------->ZAT18      ------->MYC3                                                  <----------DOF2      <---------AHL20(2)      <-------MYC3                                 <---------AHL20(2)       <---------ZAT18    <-----     --------->O2   <------------CBF               --------->AHL20(2)  <------------CBF --------->AHL20(2) -------RAV1(1)    <---------ICU4 --------->MYB46(3)            --------->ANAC58        <---------ATHB12 --DOF2   <-----------GT1    ----------->GT1     <-----------TBP--------->ANAC58    ------------>CBF   gttggccacgtttaaccttaaacattgtaagaagtaacaaatggcactcttatttatattctaagtaagcctttattgtccgcactgccaataaattaag  10020800                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                   --                                                                                  ------------>CBF <-                                                                               --------->ANAC58  <---                                                                               --------->ANAC58  ----                                                                             <---------ALFIN1    <---                              <---------AHL20(2)                             <---------SPL1(1)  <----                             <---------AHL20(2)                             <------NtERF2       -----                           --------->TOE2(3)                                <---------SPL7    -------                         <-------TEIL            ------>MYB46(1)          <---------ZAT18------->TEIL                <------------CBF      --------->ICU4---------->DOF2     <---------SPL7<---------ATHB12 ----TOE2(3)----------->HVH21--------->AHL20(2)  ------>MYB83   <---------YAB1--------->SPL7<--------   aaaatggaaacggtttgacattgtagtttcattaaatgtcattttgaaaccaaacaaagctaagttatccttgttgtccgcacggccaatgaattttcat  10020900                           <---------MYB59                          --------->ANAC55(1)                          --------->ANAC55(2)                          <---------ANAC55(2)                          --------->ANAC58                          --------->ANAC58                          --------->ANAC46                         ------->TEIL ---------ICU4           <-------TEIL -------->ATHB12         <---------TOE2(2) -------->ATHB51       <---------SPL7 ------->ICU4        <---------------AtSPL3 --------YAB1        --------------->AtSPL3 ------ICU4         --------->MYB52(1) ----->YAB1     --------->ANAC58 -----HAHB4     --------->ANAC58<----------DOF2                                       --------->ANAC58 -----YAB1    ---------->DOF2   <---------DAG2                                        --------->ANAC58 ---->ICU4----------->GT1--------->SPL7              <------MYB83                    <---------LBD16 -->YAB1 --------->DAG2--------->TOE1(2)             <------MYB46(1)            <--------P ---GT1---------->DOF2 --------->TOE2(2)----------->GT1   <-----------GT1  <-----------RAV1(1)   cattatttgaaaaggtaaaagcaaacgtacgtaacttttctcatgttaaaacatttggttttacaacaagtgatactatgtggtagccacggagggagag  10021000                                                             <------ZmHOX2a(1)             <---------TOE2(3)                            <---------LBD16           ---------->DOF2                           --------->ATHB12          --------->AHL20(2)                 <---------ARR14(2)          <---------AHL20(2)                 --------->ARR14(2)        <---------ZAT6    ----------->GT1                     <-----------GT1   <-----------RAV1(2) ---------->DOF2---------->DOF2      <---------ICU4 <---------YAB1   <---------ANAC46   agtgaaaggaaattaaaggaaagtcttaaacaaattcaatttttacgaatatgtatgatttcaggagggtttagtgtaagagcaaatgctaaactatgtt  10021100  Previous    Next  AGI:  At2g23510.1    Description:  transferase family protein. similar to transferase family protein [Arabidopsis thaliana] (TAIR:AT2G25150.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83736.1); contains InterPro domain Transferase (InterPro:IPR003480) Range:  from: 10018597    to: 10020613    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g23520.1    Description:  catalytic/ pyridoxal phosphate binding. similar to catalytic/ pyridoxal phosphate binding [Arabidopsis thaliana] (TAIR:AT5G66950.1); similar to catalytic/ pyridoxal phosphate binding [Arabidopsis thaliana] (TAIR:AT4G37100.1); similar to hypothetical protein OsJ_012177 [Oryza sativa (japonica cultivar-group)] (GB:EAZ28694.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46580.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:ABF99048.1); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transfera Range:  from: 10021071    to: 10024023    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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