Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       ---------->DOF2                <---------YAB1                                      <---------AHL20(2)       <---------MYB55(2)                                        <---------AHL20(1)       --------->MYB46(3)                  --------->AHL20(2)    --------->AHL20(1)             <---- --------HSFC1(2)                     --------->AHL20(2)    --------->AHL20(2)                  ----- ------->HSFB2a(1)         <---------At4g35610      <---------AHL20(2)                          <---- ------->HSFC1(2)--------->ATHB12     <---------AHL20(2)<---------YAB1         --------->MYB52(2)   - --------HSFB2a(1)         --------->At4g35610 --------->ICU4   --------->AHL20(2)  ----------->GT1<-   aagtttcgaaccaccattttcattgaatcagctctaatattaaaaaaaaatgatttttttgataaaatatataaagaatgttagttttgttaaaccaata  9921300            ----------->GT1   --------->AHL20(2)                             --------->ARR11(3)        <---------YAB1        --------->AHL20(1)                        <---------bZIP60(2)   <---------ICU4             <---------AHL20(2)                        <---------ANAC46  <---------YAB1              <---------AHL20(1)                     ----------->HVH21 -----AHL20(1)      <---------AHL20(2)                               ----------->TGA1 ---->AHL20(1)    <---------AHL20(2)                              --------->LBD16                  -- -----ARR11(3)   <---------ARR11(3)           --------->YAB1  --------->ARR14(2)              ------- -------->YAB1   --------->ARR11(3)           <---------ICU4  <---------ARR14(2) <---------------AtSPL8 --------YAB1    <---------AHL20(1)          --------->ICU4   --------->GLK1(2)  --------------->AtSPL8   tatcataaatacgatagtatatatttttgtattttattgagcttgtaatcagtacatggatgcgaatccgagtgacgttgatattggtacaaactacaaa  9921400                                                         <---------TOE2(3)                                  <---------AHL20(2)<--------ATHB1                               --------->YAB1       --------->ATHB12                              <---------AHL20(2)    <---------ICU4                             --------->AHL20(2)     --------->YAB1                          ---------                          --------->AHL20(2)       <---------YAB1                           ---------                          <-----------TBP          --------->ICU4                          --------->ICU4                          <---------AHL20(2)       <---------ATHB12                      <-----------      <---------ZAT6    ----------->TBP  <---------MYB52(1)     <---------LBD16--------->ZAT18    --- ------->ZAT14          --------->AHL20(2)     ------------>CBF --------->TOE1(2)      <-------TEIL --->DOF2             <-----------TBP  ----------->GT1<---------YAB1          ----------->GT1     <--   gtatagtagtctaagtatatgtccatatatatataataaatctgttatattcaatgattaatgaaacctggaaactggaagtgcaaaaatgcattgatta  9921500                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                    <------ZmHOX2a(1)          <-----                                       --------->YAB1              --------->ANAC58        <-------GAMYB                              --------->YAB1                       --------->ANAC58       <---------ANAC58 >ATHB12                     <---------YAB1         --------->ARR11(3)                    <---------ANAC58 >YAB1   ----------->GT1   --------->YAB1           <---------GLK1(2)              <------MYB46(1)  < -CBF  ---------->DOF2    --------->ICU4            <---------ARR11(3)             <------MYB83<----- ------>TOE2(3)         <------------CBF            <---------ARR14(2)            --------->MYB59   - --------DOF2         <-------TEIL   <-----------TBP--------->ARR14(2)            <---------AtMYB61 <   ctttaatcgaaaagaaaaacaaaatgcattgattatagtatttataaaactgcagattttgcagagagcaggaaacagagaggtttggttttgcgttgcg  9921600         ------>ZmHOX2a(1) --->ANAC55(2) ----ANAC58 ----ANAC55(1) ----ANAC46                                                                     --------->ANAC58 ----ANAC58<----------DOF2                                                      --------->ANAC58 ---------At4g35610                                                       <---------ANAC58         <- ----ANAC55(2)  --------->ZAT6                                            <---------ANAC46         -- -------->At4g35610     XXXXXXXXXXXXXXXXXXXX>MIR838                       <---------ANAC58       ---- ---------ZAT2<-----------GT1        <---------WRKY18(1)           <---------ARR14(2)--------->AtLEC2   tgagctgtttcctctttaactctctcttcttctacctcttgaccctctctctctctctctggtgatgcggtttcttccttggaagccatgaaaacacaat  9921700        <---------MYB52(1)          <<<<<<<<<TBF1       <------------------------ANAC81 <<<<<<<<<TBF1    <---------At5g28300       <<<<<<<<<TBF1  <------------------------ANAC81 <----------DOF2            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------At4g35610     ------>ZmHOX2a(1)  <<<<<<<<<TBF1 ------->At4g35610---------->ID1 <<<<<<<<<TBF1                      ------>ZmHOX2a(1) ----->YAB1 <<<<<<<<<TBF1  <<<<<<<<<TBF1 xxxxxxxxxxxxxxxx>smallRNA(s)    <----------DOF2 <---------GLK1(1)   cagcttcaccgttcttcttcgtctccttcttcttcttcttcttcttcttctcttctctgtttcttctctcctctgctttaaactctgatggagttctctt  9921800                                                                                                    <                                                                                              -------                                                                                            <--------                                                                                          <---------ZAT14                                                                                          <-------GAMYB                                               <---------ICU4                            --------->ALFIN1                                         --------->YAB1                                --------->ALFIN1                                         <-----------GT1                               <---------ANAC46                                      <---------ICU4                                 <---------ANAC46                                    <----------DOF2                          <---------AtLEC2 <------                          <---------ARR11(3)  <---------ATHB12 --------->ANAC58   <---------ANAC58  -         <---------ARR14(2)   ------>ZmHOX2a(1)--------->YAB1  --------->ANAC58   <---------ANAC46  -         --------->ARR14(2) ------>ZmHOX2a(2) --------->ICU4   --------->ANAC46   <---------ANAC58 --   actgagtttcaaatactctgttcttcttgatcctctctctttattacaatcatggaactacgaccacgacaatccttgttcatggcgaggtgtgttgtgt  9921900                                                                                 --------->ARR14(2)                                                                            ------>ZmHOX2a(1)                                                                        <---------ARR14(2)  <---------YAB1                                --------->MYB55(2)      --------->ARR14(2) <---------TOE2(3)                              <------MYB83           <---------GLK1(1) -----------GT1                                 <------MYB46(1)  <------ZmHOX2a(2) ---->GT1                                       <---------DEAR3(2)     --------->GLK1(1) -ANAC46            <---------DAG2              <---------MYB46(3)------>ZmHOX2a(2) ---ANAC46       <-----------GT1                --------->MYB52(2)=================HOX2a_HOX2a -------->MYB52(1)  <----------DOF2            <---------TOE1(2) ==================HOX2a_HOX2a -------->YAB1<---------MYB46(3)               <---------TOE2(2)<---------ARR14(2)                 <- ------->ICU4 ----------->GT1                 <---------MYB52(1)--------->ARR14(2)      ---------->DOF2   aataacgattcaagagttgttactttatctctcccaaactctaacctcgttggttcgattccttccgatctgggtttcctccaaaacctccaaagtctta  9922000                                                          <---------LBD16                                                       --------->At4g35610                                                      ----------->ARR10                                                    ---------->DOF2                                                <------NtERF2                                                --------->RAP2.3(1)                                               --------->ABI4(1)                                               <---------ATERF1(1)                                  -                                               ------>NtERF2 <---------MYB52(1)                    <-                                               --------->LBD16                                    <--                                              --------->RAP2.3(2)                                 ---                                              --------->RAP2.3(3)                                 <--              --------->ANAC58                --------->ATERF1(2)                                <---              --------->ANAC58                <---------ATERF1(2)                           ------>NtERF2            <-----------GT1                   --------->DEAR3(1)                            ---------        --------->ATHB51                     --------->RAP2.3(1)                           <---------DEAR3(1)        <---------ICU4                       --------->ORA47(2)                           <---------LBD16        <--------ATHB1                       --------->ERF1 --------->LBD16     --------->ARR11(3)---       <---------ATHB12                      --------->DEAR4(2)                 <-----------GT1  ----       <---------ATHB51                      --------->ATERF1(1)    --------->ATHB12    ------>ZmHOX2a(2)       --------->ICU4       --------->MYB52(1)<---------DEAR3(1) <---------ANAC58      <---------GLK1(1) --------ICU4 --------->ANAC46              <---------RAP2.3(1)  <---------ANAC58     <---------ARR11(3)   atctttccaataattcactcaatgggtcattaccggttgagtttttcgccgccgataagctccggtttcttgatttatcaaataacttgatctccggcga  9922100                                                                            --------->At4g35610 ----->ZmHOX2a(2)                                                       --------->MYB52(1) -----ZmHOX2a(2)               --------->HSFB2a(2)                      -------->P -------ARR11(3)               <---------HSFB2a(2)                   --------->HSFC1(2)            -- ------>ARR14(2)            ------->GAMYB                            <---------HSFC1(2) <---------CCA1(2) -------ARR14(2)            --------->AtMYB61                   --------->LBD16       <---------ANAC58 ------GLK1(1) <---------TOE1(2)     --------->DOF5.7(2)       <---------LBD16        <---------ANAC58 >LBD16  --------->WOX13(1)--------->MYB46(3)                 <---------LBD16<---------MYB52(2)   --- ------>ARR11(3)      --------->ANAC46                 --------->ARR11(3)   --------->ZAT2 <---------ANAC46 ----->GLK1(1) <---------TOE2(2)   ----------->GT1     <---------ARR11(3)   <---------At4g35610   <--   gatccctgtatcaatcggaggtttacacaacctccagacgttaaatctctccgataacatcttcaccgggaaactaccagctaacttagcgtctcttgga  9922200  Previous    Next  AGI:  At2g23300.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to RLK (RECEPTOR-LIKE KINASE), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G67280.1); similar to leucine-rich repeat family protein / protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G37250.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71921.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (In Range:  from: 9921688    to: 9924210    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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