Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <----------DOF2         ------->TEIL        <---------CCA1(2)       --------->LBD16                                                               --------->ZAT6      --------->ANAC58                                                        --------->ATHB12      --------->ANAC58                                                       --------->ICU4     <---------LBD16                               --------->ARR11(3)    ------->GAMYB  <-----------HVH21    --------->ICU4            ----------->ARR10--------->YAB1    <---------YAB1 ->ANAC46<---------ARR11(1)<-------TEIL------->TEIL<---------ARR11(3)   --------->ANAC46   --------->MYB46(3)   atggtgtcccgcatctttggtagcaaagattcaatttgaagaacctagacgtagatattaagaggctatcatcaacgaaatgatttatcagtaaccaaaa  9855400                                                             --------->ANAC58                                                     --------->ANAC58                                                     --------->ANAC58                                                     <---------ANAC55(2)              XXXXXXXXXXXXXXXXXXXXX>MIR2935          --------->ANAC55(2)                        -----          --------->ZAT14                           <---------LBD16                            ------          --------->ZAT18                         ----------->HVH21                         ---------          <---------ZAT18                        <-----------TGA1--------->MYB52(1)        <<<<<<<<<ARR2          <---------ZAT14                        <-----------HVH21      ---------->DOF2    <<<<<<<<<ARR1         --------->ALFIN1             <---------ARR11(3)--------->ARR14(2)                 <---------ATHB12 --------->ANAC58        --------->YAB1         --------->ANAC46 ---------->DOF2         --------->WOX13(1) --------->ANAC46  --------->ZAT6     --------->ARR11(3)<---------ARR14(2)              --------->MYB46(3) --------->ANAC58  <<<<<<<<<<<<<<<<<LFY ------>ZmHOX2a(2)    --------->ANAC58        --------->LBD16   ctcaagcaagagtgcagaataacacaatggtcactaatttgatcttaaaaccgtcacggattcaagctaaaggcaaaagaaaacttccgaacaatcataa  9855500                                                                                       <----------DOF2                          --------------->AGL15--------->TOE1(2)             --------->ANAC58                          <---------------AGL15--------->TOE2(2)             --------->ANAC58 ---->DAG2         <<<<<<<<<MYB98             ----------->RAV1(2)            --------->ANAC46 ---->DOF2        ----------->GT1         <-------TEIL                       --------->ANAC55(2) ---- >YAB1           ----------->GT1         --------->CCA1(2)                <---------SPL7<---------ZAT14   agcaaactaatctatgcatatgttaaaactctatatagctaagatacaacctgagacgagaagagaagtttagggacttacgaaatagactttactagag  9855600                     ============================HOX2a_HOX2a                     <------ZmHOX2a(2)                ---------->DOF2             ------>ZmHOX2a(1)             ===============HOX2a_HOX2a           ----------->RAV1(2) <---------ANAC58   --------->ARR11(3)    ------>ZmHOX2a(1) <---------ANAC58   <---------ARR11(3)  ----------->RAV1(2) ------>DOF2 --------->LBD16 <---------WOX13(1)               <----------DOF2                  ------   aaagcttgccaactcctgaaaagatcaatggattgatcaacatcctgagtcaattcttcaaatgctttaccaagtttctcatcaaaaacaaaatcagagg  9855700                                                                                            ---------       <---------ARR11(3)         <---------ATHB12                                 <---------YAB1    ----------->RAV1(1)  <---------ALFIN1                                    <---------ATHB12 ------- ----->GT1            --------->REM1(1)                       --------->HSFB2a(2) <---------ARR11(3)   taacaacaacatctgctataggcttcaacactctcaataactcttcaactctcttatagtacttctcaaacgggtctaaatcaatatgtttagaagatga  9855800                                                        ----------->RAV1(1)                                                       <----------ID1                     --------->ANAC46                              --------->ARR14(2)     --------->ANAC58                     --------->ANAC58                              --------->ARR11(3)     --------->ANAC46                     --------->ANAC58                              <---------ARR11(3)     --------->ANAC58                  <-------TEIL                              <---------ARR14(2)    --------->DAG2              ---------->DOF2         <----------ID1     ----------->ARR10      ---------->DOF2           <------ZmHOX2a(2) >At4g35610     <---------ARR11(3)             --------->LBD16             <---------At4g35610 ---->HVH21   ----------->ARR10           <---------ALFIN1                 --------->At4g35610  <----   cagatttagaaacgacgagatacttctgagaagaacttccatttccaccctgaaaaagcaacaaaatttgaaacttcagatcaaaagggttcacgaatta  9855900                              --------->ANAC58                              --------->ANAC58                           --------->TOE1(2)                         <---------------AtSPL3                         <---------------AtSPL8                         --------->DAG2                  --------->YAB1                 --------->MYB46(3)<----------DOF2               --------->WOX13(1)  <---------DAG2              --------->MYB46(3) ------->TEIL                                                  ------        ------->TEIL   ---------->DOF2                                                        <------ZmHOX2a(1) -------GT1  ------------>CBF<-------TEIL           <----------DOF2                          --------   acttgctacgaatcgaacaatcaccaaaaggtacgaactttatggaatccaaaacttttctcttgaagaaaattcaaattcaaatgtaacccatgaggag  9856000               --------->ANAC55(2)               --------->ANAC46               --------->ANAC58               --------->ANAC58         <---------ARR11(3)         --------->ARR11(3)     ------>ZmHOX2a(1)                                        ----------->HVH21     --------->LBD16                      --------->GLK1(1) <----------DOF2                      ---- --------->ARR11(3)<------------CBF  <---------LBD16     --------->ARR11(3)                 --------- ----->GT1  --------->TOE1(2)  <---------ANAC58          <---------ARR11(3)               ----------- --->GT1--------->GLK1(1)      <---------ANAC58  --------->ICU4 <---------TOE2(3) <------------CBF---   aaaaatcctgaaatcttacgaaattgatcaaatgggtgtctcggaaatgtaatgagcaagagctttgacgaagagaggttagagaattggaacagagaaa  9856100                                                                                            >>>>>>>>>TBF1                                                                                      ------->MYC3                                                                                      <-------MYC2                                                                                      ------->PIF4                                                                                      <-------MYC3                                                                                      ------->MYC2                                                                                      <-------PIF4                                                                                      <-------PIF5                                                                                      ------->MYC4                                                                                      <-------MYC4                                                                                     --------->ANAC46                                                                                     ================                                                                                     <---------TGA1a                                                                                     --------->ANAC58                                                                                     --------->ANAC58                                                                                     --------->TGA1a   --------->At5g28300                                                              ------->TEIL  ----------->GT1                                                                --------->AtLEC2 ----------->GT1                                                           <---------MYB52(2)    ---- ------>DOF2                                                        ===========================bZIP_DOF -->GT1                                                  ---------->DOF2<----------ID1------->PIF5 >GT1   <------------CBF                                 ======================================bZIP_DOF ------>DAG2                                       --------->ANAC46 ---------->DOF2<------------OsbHLH66   aaaggggtaaaattgaaaaccctaagtgagatagatagatagatcgaaactatacgagagaaagagagaagaaagaaacaaacatgcacgtgaagaagaa  9856200                                                     <---------ARR11(3)                                                     --------->ARR14(2)                                                     --------->ARR11(3)                                                     <---------ARR14(2)                                                     <---------ARR11(1)                                                     <-----------ARR10                                                    <---------CCA1(2)                                                    --------->GLK1(1)                                                --------->ANAC58                                                --------->ANAC46                                                --------->ANAC58                                         --------->ANAC58         <----------DOF2                 --------->ANAC46                      <---------YAB1       <---------ATHB12                  --------->ANAC55(2)                 --------->YAB1     --------->WOX13(1)                  <---------ANAC55(2)           --------->LBD16   <---------ATHB12                      ----------->GT1              <---------ANAC46 --------->GLK1(1)                       --------->ANAC58            <---------LBD16  <---------YAB1 ===================bZIP_DOF <---------YAB1 ---------->DOF2    <<<<<<<<<TBF1 <--------HAHB4 ------->GT1        --------->AtLEC2     --------->ANAC55(1)<<<<<<<<<TBF1   <---------YAB1     ------   gggaaatcaatctttctcggtcttgcagattatagttgagagcacgtaaaacgcaaatcttcttcttcttctccgtgtattattatttctgattagccaa  9856300  Previous    Next  AGI:  At2g23140.1    Description:  binding / ubiquitin-protein ligase. Identical to Uncharacterized protein At2g23140 [Arabidopsis Thaliana] (GB:O22193); similar to armadillo/beta-catenin repeat family protein / U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G54790.1); similar to hypothetical protein OsJ_024761 [Oryza sativa (japonica cultivar-group)] (GB:EAZ41278.1); similar to hypothetical protein OsI_026586 [Oryza sativa (indica cultivar-group)] (GB:EAZ05354.1); similar to arm repeat-containing protein [Nicotiana tabacum] (GB:AAO61490.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD- Range:  from: 9852774    to: 9855842    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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