Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <---------ANAC58                                                                          <-----------------------TaNAC69(2)                                    ------>ZmHOX2a(2)            <---------TOE2(3)       <---------ANAC55(1)                                   <------ZmHOX2a(2)           -------->HAHB4            <---------ANAC55(2)                                  --------->ARR14(2)           <---------ICU4            <---------ANAC58                                  <---------ARR14(2)          <---------ATHB51  ---------->DOF2                             --------->ARR14(2)            <---------YAB1 <-------TEIL   --------->ANAC55(2)                             <---------ARR14(2)    <----------DOF2----------->GT1      <-----------GT1            <-------TEIL    --------->GLK1(1) --------->YAB1  --------->ICU4 --------->ANAC58 -------  ----------->GT1 <-----------RAV1(1)   <------ZmHOX2a(2)  --------->AHL20(2)--------->AtLEC2 <------ ----->YAB1<-----------GT1  <---------GLK1(1)<-------TEIL  <---------AHL20(2)--------->ANAC58--------   catatggttatatatacattatgtggtttgatatccgatccgatcgattcatacttttgttttaattatggaaaaatgcatgcaaagtattacttgtcca  9851000      <---------YAB1   <---------YAB1                                                                            <------- -->ZAT18                         <---------ICU4      --------->ANAC46                      <-------- ---ZAT18                  --------->ZAT6             --------->ANAC58                --------->YAB1 -->ARF1            ---------->DOF2  <-----------GT1  --------->ANAC58        --------->TOE2(3)     -   ccattgtgattatagagttgaacaaagtaagactaatatttcccaaacaaaaacataagcaatctcgttagaaaaacaaatctcaaaataagaatatcac  9851100                                                    <---------ANAC46                                                   --------->At4g35610                                                   <------NtERF2                                                   <---------At4g35610                    <---------At4g35610                                                  <---------MYB46(3)       --------->KAN4(1)                                                 <---------RAP2.6(2)      --------->ARR14(2)                                               <---------MYB46(3)         <---------ARR14(2)                                     --------->ALFIN1                     <---------KAN4(2)                       <---------ANAC46       <---------AtMYB61           ---------->TaMYB80                       <---------ANAC58 <---------DEAR3(1)             --------->LBD16    --------->ZAT2                       --------->ANAC55(2) --------->ALFIN1          <---------LBD16      --------->At4g35610                       <---------ANAC58 <---------ANAC46         <-----------HVH21        <---------ZAT2 --YAB1          <---------ANAC58    ----------->HVH21          --------->AtMYB61       <-----------RAV1(2) -ARR11(3)       <---------ANAC46    ----------->TGA1        <---------PCF2<----------TaMYB80 --------->DOF2  <---------ANAC58   <-----------HVH21        <---------PCF5<---------KAN4(1)     <---   tgaaaagaaatttttgttttcgtatgcgtgtccatagcggtgacggtgatggtggctgagatgggaccatcaccggaatatgccaactctccagctgttt  9851200                                                       ---------->DOF2                                                      ------->GAMYB                                                     --------->MYB46(3)                                     <---------------AGL15  --------->CCA1(2)                                     --------------->AGL15 --------->ARR11(3)                                    ----------------->AGL2 --------->AHL20(1)                                    ----------------->AGL3--------->YAB1                                   >>>>>>>>>MYB2    --------->ANAC58                            --------->LBD16         --------->ANAC58                           <---------ANAC58       --------->MYB46(3)                           <---------ANAC46   <------ZmHOX2a(1)           ----------------->AGL1  <-- --------GT1               <---------ANAC58 --------->MYB59<---------ARR11(3)                  <-----   atccgtctagcaaacaaaaacaaaaaatgccgtagaaaaccaaaattaggaaacaaccaaagatattgggcccaatgccagactgggcctagctcaaata  9851300                                                                                   <---------AHL20(1)                                                                                   <---------ARR11(3)                   <---------YAB1                                         ------>ZmHOX2a(2)           --------->YAB1                                                 =========================HOX2a_HOX2a           --------->ANAC55(1)                                           --------->GLK1(1)           --------->ANAC46                                              <------ZmHOX2a(2)       ----------->RAV1(1)                                               <---------GLK1(1)       --------->AtMYB61                                                 ==========================HOX2a_HOX2a       ------->GAMYB                                 <------MYB83       <---------ARR11(3)      --------->MYB46(3)                      <-----------GT1           --------->ARR11(3)     -------->P   --------->AHL20(2)         <---------ATHB12           --------->AGP1    ------->GAMYB<---------ICU4              --------->MYB46(3)  ------->GAMYB     --------->AHL20(1)   --------->MYB46(3)              --------->MYB46(3)<------MYB46(1)    <---------ARR14(2)        ---   <---------MYB55(2)       --------->At4g35610     --------->SPL7      <---------AGP1          <----   <---------MYB111(2)<-----------GT1      <---------ICU4    <---------WRKY12      --------->ARR11(3) ---------GT1   --------->ICU4   --------->MYB52(1)<---------MYB52(1)   --------->ARR14(2)    ------- ----ICU4<---------ALFIN1   <---------At4g35610<---------At5g28300     <---------CCA1(2)    ------>ZmHOX2a(1)   ttacaacaaccacacataatttttatactctgctccaacggctactaatcaccgtaggtcccttcaacggtccagatctctcaaatattttctcctatat  9851400                                                                                                   <-                                                                                             --------                                                                                        <---------YAB1      ---------->DOF2                         <----------DOF2                         --------->YAB1   --------->ANAC58                    --------->ZAT6                                 <---------ICU4   --------->AtLEC2               --------->ANAC58                          <---------ICU4   --------   --------->ANAC58--------->ANAC46   --------->ZAT14                      --------->AHL20(2)-------- ------>ANAC46  <-------TEIL      --------->ANAC58           ------>ZmHOX2a(1)       --------->ICU4-- -------GT1 <-------TEIL       --------->ZAT14<---------DAG2--------->TOE1(3)        <---------ATHB51 ---->TBP  --------->CCA1(2)  *TSS--------->ANAC46          --------->TOE2(3)  <-----------GT1    ---   acaacatgcaaagatacatacactcgagcattcttcactcaacactcactttttctctaattccttaattctctcaactaattacaaattatgactcgca  9851500                                                                     --------->DEAR3(1)                                                                    --------->DEAR3(2)                                                                  <---------ALFIN1                                                                 --------->ABI4(1)                                                                 <---------ZAT14                                                                 --------->ZAT14                                                                 <---------ABI4(2)                                                                 <---------SPL7                                                                <---------ALFIN1                                                                --------->AtMYB61                                                           ------>NtERF2=============================HOX2a_HOX2a                                                           <-----------HVH21                                                        <---------LBD16 =================HOX2a_HOX2a                                                    <---------ARR14(2)  <------ZmHOX2a(2)                                               ------>NtERF2   --------->ANAC58                                             <-------GAMYB--------->LBD16                                             --------->ATERF1(1)--------->DEAR3(1)                                            <---------MYB46(3) --------->bZIP60(2)                                            <---------DEAR3(2) --------->ANAC46           <-------GAMYB                   <---------MYB46(3)  <------NtERF2       ------------>AtMYB77                <---------DEAR3(1)  --------->ANAC58      ----------->HVH21                    <---------At1g77200------>NtERF2 --------GLK1(2)      ------>ZmHOX2a(2)    <---------DREB2C(2)<---------ATERF1(1) ->ANAC46  --------->At5g28300            <---------MYB52(1)--------->MYB46(3) ->ANAC58 ----------->GT1 --------------------->WRI1--------->ARR14(2) <---------ARR14(2) ->ANAC58 <---------MYB46(3)      --------->YAB1<------NtERF2<---------ALFIN1          --------->REM1(1) ------->ARR14(2)    <---------At4g35610 <-----------HVH21--------->ANAC46        ------>ZmHOX2a(1) ------>KAN4(1)      --------->At4g35610--------->DEAR3(1)------>NtERF2--------->ARR14(2)     ------>ZmHOX2a(1)   atattctcttgacggttacattgatctgcattgttttcatcaccgtcggtggccaatctccggccaccgcaccgatccattctccttctacatctcctca  9851600                                                               ------>NtERF2                                                <---------ARR14(2)                                            --------->LBD16   <---------DEAR3(1)                               <---------At4g35610           <------NtERF2                               <---------ZAT2 <------NtERF2  <---------LBD16                               ----------->RAV1(2)           --------->ATERF1(1)                               --------->At4g35610  <---------LBD16                   --------->LBD16          --------->RAP2.6(2)--------->LBD16                   ------>NtERF2           <---------LBD16 <---------ARR14(2)                  --------->ANAC46        ------->GAMYB   --------->ATERF1(1)        --------->At4g35610                  --------->ANAC58       --------->DEAR3(1)--------->ARR14(2)        ----------->RAV1(2)                  --------->ANAC58    <---------ALFIN1  <---------DEAR3(1) --------->LBD16         --                 <---------LBD16  --------->At4g35610--------->ANAC46    <---------LBD16          <--           <---------ALFIN1    --------->ZAT2--------->LBD16<---------ATERF1(1)     ------->TEIL<----           --------->O2      <-----------RAV1(2)--------->ARR14(2)   --------->HSFB2a(1)       ------         <---------ALFIN1 <-----------GT1--------->ANAC46<---------ATERF1(1)<---------MYB52(1) <-----   taagcctaaacccacatctcccgccatttctccagctgctccaacgccggaatccacggaggctccggcgaagactccggtagaagcacctgtagaggct  9851700                                           <---------ALFIN1                                          <---------At4g35610                                          <------NtERF2                                         --------->ANAC58                                     --------->ANAC46                                     --------->DEAR3(1)                                ======================HOX2a_HOX2a                                ------>ZmHOX2a(2)                               =======================HOX2a_HOX2a                               <---------GLK1(1)                              --------->ARR11(3)                              <---------AGP1                              --------->AGP1                              <-----------ARR10------>ZmHOX2a(1)            ----------->RAV1(2)--------->GLK1(1)            <---------At4g35610<------ZmHOX2a(2)          --------->REM1(1)   <---------ARR11(3)          <---------ALFIN1    <---------ARR14(2)                             --------->LBD16        ===============================HOX2a_HOX2a                         <---------LBD16        ==============================HOX2a_HOX2a                        <---------ARR14(2)        ------>ZmHOX2a(1)     --------->ARR14(2)                        <---------At4g35610  ------>ZmHOX2a(1)          <---------CCA1(2) <-----------HVH21        --------->At4g35610  <-------  =====================================HOX2a_HOX2a                      --------->ZAT2       --------  ====================================HOX2a_HOX2a  <---------LBD16  ------>ZmHOX2a(1)        -------- ---->ZmHOX2a(1)          --------------------->WRI1 --------->LBD16<-----------HVH21        <------- -------ALFIN1          --------->ANAC46 --------->ANAC58    --------->ARR14(2)            <--------- -----ATERF1(1)       --------->ANAC46------>NtERF2----------->RAV1(2)  <---------ZAT2   <-----------HVH21 --->ARR14(2)         <---------ALFIN1<---------ATERF1(1)<---------At4g35610<---------ANAC46 -------- ----ARR14(2)         --------->REM1(1)  <---------ATERF1(1) <---------ARR14(2)       ------->TEIL   cctccttctcctacacctgcttctacacctcagatctctccgcccgctccttcaccggaggctgatactccttcagctccggagattgcaccttcagctg  9851800                                                                       --------->ZAT2               -                                                                      <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                --------->LBD16                    --           --------->At4g35610                                  ------>ZmHOX2a(1)                 ---           <---------ZAT2                                       <---------HSFB2a(2)            ------           --------->ZAT2                                       --------->HSFB2a(2)            <-----    --------->LBD16                                           ----------->RAV1(2)              ------    ------>NtERF2                                            ------>NtERF2                     <-----    <---------ATERF1(1)                                     <---------ARR14(2)                <------   <---------RAP2.6(2)                                      --------->ARR14(2)              ---------  <---------LBD16                                         <---------ATERF1(1)              <---------ATERF1(1) --ZAT2  <---------ALFIN1                                 ------>NtERF2<---------ZAT2      ------>NtERF2 ->At4g35610                                            <---------LBD16--------->At4g35610 <------NtERF2 ->ZAT2------>NtERF2    --------->TOE1(2)              <---------ATERF1(1)          ---------->DOF2<- --At4g35610            --------->TOE2(2)   --------->YAB1--------->LBD16        <----------DOF2 <--- --RAV1(2) <---------At4g35610       ---------->DOF2 <---------At4g35610  <---------LBD16 --------->ANAC58 --->RAV1(2)   ----------->HVH21 <----------ID1      --------->At4g35610<---------GLK1(2) --------->ANAC58   atgttccggctccagctctgacaaaacataagaagaagacaaagaagcataagaccgctccggctcctggaccagcttcggagcttttaagcccgcctgc  9851900  Previous    Next  AGI:  At2g23130.1    Description:  AGP17 (ARABINOGALACTAN PROTEIN 17). Identical to Lysine-rich arabinogalactan protein 17 precursor (AGP17) [Arabidopsis Thaliana] (GB:O22194); contains domain PRICHEXTENSN (PR01217) Range:  from: 9851430    to: 9852465    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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