Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->ANAC58    --------->ANAC58  ---------->DOF2 ----->ZmHOX2a(1)                               <------------MYB.PH3(1) ------->TOE1(3)                              --------->MYB52(1)        ----------------->AGL1 ------->TOE2(3)                    ----------------->AGL1          <-------GAMYB   --------->ANAC58< -----DOF2                      <----------DOF2--------->RAP2.6(3) <---------ANAC58 --------->ANAC58- ---DAG2                <---------At4g35610   <---------DOF5.7(2)  <---------ANAC58 ----------->GT1-- --GT1                 <---------TOE1(3)    --------->DOF5.7(2)    --------->MYB52(2)              <-   tccttaaagcaagcgtagaaggcttaagcttaggctttgccatatcgataacggcttcacattgttgtttcgttgcgaaattcggcaagtaaaaaactcg  9842900                                                      ------->TEIL                                                      --------->ARR14(2)                                                      <---------ARR14(2)                                               <---------ANAC58      --------->At4g35610                      <---------ANAC58           <---------YAB1      <---------At4g35610                    <---------ATHB12       <---------TOE2(3) ---------ARR14(2)         --------->ANAC46 ------>MYB46(1)        ---------->DOF2 -------->ARR14(2)   --------->KAN4(2)      ------>MYB83       ------->TEIL                    <----- ------->HSFB2a(1)  <---------ICU4      ------->TEIL  --------->GLK1(2) --------->CCA1(2)   <-------- -----ZmHOX2a(1)   <---------YAB1   --------------->AtSPL8--------->At4g35610        <----------DOF2<   aggattccagcttaaaccctgatcattccacatcaaaacatgtaccaatccttgtgaatctgatgaatctaaagttatgagagttctctttatattgttg  9843000                                                                                  ------>ZmHOX2a(2)                                                                                 <------ZmHOX2a(2)                                                                                <---------ARR14(3)                                                                                --------->ARR11(3)                                                                                --------->ARR14(2)                                                                                <---------ARR14(2)                                                                                --------->AGP1              ------->GAMYB                                                     <---------ARR11(3)              ----------->HVH21                                                 <---------GLK1(2)             <---------MYB52(2)                                          --------->DOF5.7(2)    ----- --------->CCA1(2)    ---------->DOF2                                   --------->TOE1(3)       <---- ----REM1(1) <------------AtMYB77                           --------->GLK1(2)   <-----------ARR10 ---RAV1(1)--------->MYB52(1)                        ------>ZmHOX2a(2)  --------->TOE2(3)    -------- ---------ARR14(2) --------->AtLEC2            --------->YAB1      <-------TEIL --------->ARR14(3)   tagatttgagaagtaactgacatgaaaaggaatgttagagacagaagaaccatgatccaaagaatcagtttcatcgttaacagatcttcttgttgtcgga  9843100                                                          --------->ANAC46                                                          --------->ANAC58                                                          --------->ANAC58                                                  --------->ARR11(3)                                              ---------->DOF2 --------->GLK1(1)                                         <---------ARR11(3)  <---------ARR14(2) ---->ARR14(2)                           --------->ARR11(3)------->GAMYB     <---------ARR11(3) -----GLK1(2)                           --------->GLK1(1)<---------LBD16     --------->ARR11(3)  ---- ->ETT(1)       <---------ANAC46<------ZmHOX2a(1) <---------ARR11(3)    ------>ZmHOX2a(2)---------->DOF2   atctcactgaaactaattccctgtagaaaacagaggaaacagagttcttaaaggtcttcaacggaactcgatgatcgaagattttaagagagaaagagat  9843200                                                                         --------->ANAC58                                                                        --------->SPL1(2)                                                                        <-------TEIL                                                                        ------->TEIL                                                                        <---------LBD16                                                                       --------->SPL1(1)                                                                       --------->MYB52(1)                                                                      <---------SPL7                                                                      --------->TOE2(2)                                                                      --------->TOE1(2)                                                                    <---------------AtSPL3                                                                --------->YAB1                                                               <---------ATHB12                                                          <---------ANAC55(2)                                                          --------->ANAC58                                                          --------->ANAC55(1)                                                          --------->ANAC58  --------->ARR14(2)    --------->TOE1(2)                                     --------->ANAC55(2)  --------->ZAT6    --------->TOE2(2)                                     --------->ANAC46----------->GT1   ----------->RAV1(2)                                  <---------ALFIN1--------->SPL7  --------->GLK1(2)                                   ----------->RAV1(1)--------->ANAC58  ------->TEIL                                     --------->ANAC46 --------------->AtSPL3 --------->ARR11(3)                                --------->ANAC58 <---------------AtSPL8 ------>DOF2  --------->ICU4                       --------->ANAC58<------------------SPL14   <------   aaagaacctgagagaaaagattgaagaaacagaaaccgaagatggccaagaagaagcaacacgcaatgaaaacgtacggaaacactaacttcttctcttt  9843300                                    <---------ANAC46                      --------->ARR11(3)                      <---------ARR11(3)                      --------->ARR14(2)                      <---------ARR14(2)                      <---------GLK1(2)--------->REM1(2)                      <---------ARR14(3)                      --------->ARR14(3)                    ----------->ARR10 --------->ALFIN1            <---------GLK1(1)       ------>ZmHOX2a(2)          <---------ANAC58      --------->LBD16                        ------     <---------ARR11(3)           <---------ANAC46    <---------At4g35610                     -------     --------->ARR11(3)  <-----------GT1              <---------LBD16             ---------->DOF2   - ----DOF2   <---------ICU4        <---------ANAC58    --------->At4g35610   ----------->GT1   <------   gccatatgatctcatcttgacgaagattttcttccttcgtgtggagacttagaatcagcgggaatttgaattctgaaacagagaaaaagagagagagagt  9843400                                                                                    --------->ANAC58                                           --------->MYB46(3)                       --------->ANAC58 ----->GT1                           <-----------ARR10                  <----------DOF2      <------- ---->GT1                            --------->GLK1(2)         ---------->ID1   --------->ANAC58 --------->DOF2                     <---------GLK1(2)         <-----------GT1 ---------->DOF2-------- ---ZAT6     ---------->DOF2  ----------->HVH21   <----------DOF2<----------DOF2--------->ANAC58   taaaaagagagttaccaaagtagaagatgtgtttgacagaatctaaccaaaactttgtgttttttttcttttttcttttacaaagcaagtcatttccaga  9843500                    <---------ZAT18                    --------->ZAT18                   <---------ANAC46                   <---------ANAC58                                                     <xxxxxxxxxxxx               <------------CBF                           --------->ZAT6     <-----------GT1         ----------->GT1                               --------->AHL20(2)   <xxxxxxxxxxxxxxxxsmallRNA(s)       <-------TEIL<---------ANAC58                    <---------ICU4     xxxxxxxxxxxxxxxx>smallRNA(s)      --------->ARR14(1)                              --------->ICU4     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------->CCA1(2)                               <---------YAB1     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <---------ARR14(2)                            --------->ICU4       <------ZmHOX2a(1)     --------->ARR11(1)                            <---------YAB1      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     --------->ARR14(2)                        ----------->GT1         xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --HSFB2a(2) <---------AHL20(2)             ---------->DOF2    ---------->DOF2    --------->LBD16 ->HSFB2a(2)--------->AHL20(2)          ---------->DOF2<---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   cttattagatacgtttaaattgtgtgctatgaacagaagacaaaaagaaaggtataattaatactaaaagactaggatttaacccgtggtataccacagg  9843600                    --------->YAB1                   <---------AHL20(2)                  --------->AHL20(2)               <-----------TBP                                                <---------TOE2(3)               --------->AHL20(2)                                             <---------YAB1               <---------AHL20(2)                                            --------->AHL20(2)             <-----------TBP                                                 --------->YAB1           <-----------TBP                                                   <---------AHL20(2)           <---------AHL20(2)                                         <---------AHL20(2)           --------->AHL20(2)                                        --------->AHL20(2)         <-----------TBP                                         <---------AHL20(2)      <---------AHL20(2)                                     <---------AHL20(2)             ---------      <---------AHL20(1)           <-----------GT1       <---------YAB1    --------->AHL20(2)      --------->AHL20(2)     <---------AHL20(2)         <---------AHL20(2) <---------AHL20(2)       -   --------->AHL20(2)     --------->YAB1                --------->AHL20(2)--------->YAB1    ---------   <---------AHL20(1)     --------->TOE1(3) <---------AHL20(2)   --------->AHL20(2)         <--------   --------->AHL20(1)  --------->YAB1<---------YAB1 <---------ZAT6   <---------AHL20(2)    --------->AHL20(2) xxxxxxxxxxxsmallRNA(i2)  --------->TOE2(3)--------->AHL20(2)--------->AHL20(2)   ----------->GT1  <-   gcaaatattttatttatatatataataatcttaaattttacgattttaaatttagtattaaaattatataattttatattaatattgtaaaaaaaaaatt  9843700                                                                                       --------->ARR11(3)                                                                                       <---------AHL20(1)                                                                                      --------->RVE1(1)                                                                                      --------->CCA1(1)                                                                                  <---------AHL20(2)                                                                                  --------->AHL20(2)                              --------->ANAC55(2)                              <---------AHL20(1)                              <---------ANAC55(2)                              --------->AHL20(2)   <                      <---------ARR11(3)                                       --------->AHL20(1)   -  <---------YAB1      --------->ARR11(3)                                     <---------AHL20(1)    -- >AHL20(1)        ---------->DOF2                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <-- -------->YAB1--------->AHL20(2)                    <-----------HVH21    --------->YAB1<---------ARR11(3) >AHL20(2)    <---------AHL20(2)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->YAB1<----------DOF2 -AHL20(2) --------->YAB1 <-----------GT1  --------->AtLEC2     <-----------GT1<---------AHL20(2) <-- --------ZAT6--------->AHL20(2)--------->LBD16     --------->ANAC46xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   agtgatgatagaataataaataaagatttaacccgtgttatatcaatgcaaacccgtcgcactatataactcgtctcataatattttaatatctttttat  9843800  Previous    Next  AGI:  At2g23096.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT4G33910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71976.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 9841846    to: 9843315    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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