Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        ----------->GT1                   --------->ATHB51                               <---------ANAC58                   --------->ATHB12                               <---------ANAC58                   -------->ATHB1                                 <------MYB83                  <---------YAB1                                  <------MYB46(1)                --------------->AGL15                            <---------MYB46(3)                <---------------AGL15       --------->ATHB12     --------->MYB55(2)               <-----------------AGL3      <-------TEIL         --------->ALFIN1                  ---       --------->At4g35610             <---------ARR14(2)     --------->ALFIN1      --------->CCA1(2) ----YAB1---------->DOF2               --------->ARR14(2) <---------ZAT14      <-----------GT1    ---   aatgtgatcagcaaagctctattattggtagtatatatgtgtatattcattagtggagactggagagtgggtgagtaaaataaacgatatgactagtacc  9760600                                  =================HOX2a_HOX2a                                  =========================HOX2a_HOX2a                                  ------>ZmHOX2a(2)                                 ==================HOX2a_HOX2a                                 <------ZmHOX2a(2)                                <---------ARR14(2)                                <---------ARR11(3)                                --------->ARR14(2)                                --------->ARR11(3)       --------->AHL20(2)                              ----------->ARR10          <---------AHL20(2)                            ---------->DOF2            <----------DOF2                      --------->YAB1        <---------------AGL15                <---------AHL20(2)                      <---------ICU4        ------>ZmHOX2a(1)                   --------->AHL20(2)             --------->ARR14(2) <---------GLK1(2)   <------ZmHOX2a(1)     <---------TOE2(3)       ----------->TGA1 <---------YAB1     <---------------AGL15    --------->AHL20(2)             <-     <---------ICU4   <--------HAHB4       --------------->AGL15    <---------AHL20(2)    ---------->DOF2 ------>ANAC58       <---------YAB1       ----------------->AGL1   <---------WOX13(1)  --------->AtLEC2 ------>ANAC58  --------->TOE2(3)==========================HOX2a_HOX2a    <---------TOE1(3)      <---   tcgcaaaacatgacgaaacctctattattacaaagatccttgtttcctatatgaggactttaatttttgatttattaaggtattaattcatccaaagtta  9760700                                                   <---------AHL20(1)                                                   --------->AHL20(1)                                                   <---------ARR11(3)               <---------AHL20(2)             ------>ZmHOX2a(1)              --------->AHL20(2)              ------------>CBF              <---------AHL20(2)            ------>ZmHOX2a(2)         ------>ZmHOX2a(1)                 <------ZmHOX2a(2)        --------->TOE2(3)                 <---------ARR11(3)       ------>ZmHOX2a(2)                  --------->ARR11(3)      <------ZmHOX2a(2)                   <---------ARR14(2)     <---------ARR14(3)                   <---------GLK1(2)                                      ----     --------->ARR14(3)                   --------->ARR14(2)                                   ------     --------->ARR14(2)                   --------->AGP1                                  ------>MYB46(1)     <---------GLK1(2)                  --------->MYB59          <----------DOF2          -------->P     <---------ARR14(2)                 ----------->ARR10   ------>MYB83                  ------>MYB83     <---------ARR11(3)             --------->MYB46(2)      -------->P<----------DOF2     ===========     --------->ARR11(3)             --------->MYB111(1)     ------>MYB46(1)             <---------MYB59 ---------->DOF2                    <---------MYB46(3)    <---------MYB59            <-----------GT1 --------AHL20(2)                   --------->MYB111(2)<-----------GT1=============================== ------YAB1   <---------AHL20(1)   <--------P--------->TOE2(3)   ====================================   ttttaaagatcctcaattttttttttttttttttttggtagttagatcctcaatatataacctactccttttcttttgtcgaaaatataacctactccta  9760800          <------ZmHOX2a(1)       <-----------RAV1(2)      --------->TGA2(2)     <-----------TGA1     <-----------HVH21    <---------TGA1a                                                                               <--    <---------TGA2(1)                                                                       <--------    --------->O2                                                                            ---------    --------->bZIP60(1)                                                                     ---------    <---------bZIP60(1)        <---------AHL20(2)                                     ----------->GT1    --------->TGA1a            <---------AHL20(1)                                  <------------CBF    --------->TGA2(1)       --------->AHL20(2)                                    --------->ATHB12---    <---------O2     --------->ATHB12                            --------->ANAC58 -------->ATHB1-----    --------->ANAC46 --------->ATHB51                            --------->ANAC46 --------->ATHB51--- ----------->HVH21  <---------YAB1                           ---------->DOF2   --------------->AGL15 ----->REM1(1) --------->TOE2(3)                        ------------>CBF      <-----------------AGL2 >ZmHOX2a(1)<---------GLK1(1)  --------->ARR11(3)   <---------------AtSPL8    <-----------------AGL3< =============MYC_MYB-------->ATHB1                <---------ZAT14     --------->MYB46(3)   <-------- =============bZIP_DOF   --------->YAB1          <---------YAB1  --------->ANAC58<---------YAB1 <---- =============bZIP_DOF<------------CBF  ------>ZmHOX2a(1)    --------->AHL20(2)<---------------AGL15-   catttgacgtcaggaaacctctattattgataatatatggtcctacatatgactatagtacaataaaacgccatcaaacgtctattattggtaattaatt  9760900     <-----------GT1                 ------>ZmHOX2a(2)    --------->AHL20(2)               =================HOX2a_HOX2a -------ANAC55(2)                   ==================HOX2a_HOX2a -AHL20(2)                          <------ZmHOX2a(2) >AHL20(2)                         <---------ARR11(3) >AHL20(1)                         <---------ARR14(2)         <----------DOF2 -------->GT1                      <---------GLK1(2)         ------>ZmHOX2a(2) ---->AHL20(2)                     --------->ARR14(2)      <---------ARR11(3) ------>ANAC55(2)                  --------->ARR11(3)      --------->ARR11(3) ---------AHL20(2)             ---------->DOF2 =====================HOX2a_HOX2a -AHL20(1) <----------DOF2    <---------AHL20(2)  <---------At4g35610                 <---------MYB52(2) -----AHL20(2)                --------->AHL20(2)  --------->At4g35610               ------->TEIL -------->AHL20(2)        --------->ICU4       ------>ZmHOX2a(1)        --------->MYB52(1)--------->ZAT6   aagtaattaacttcttttttttgggataaaaattaaagatccttgtttcctaagatgactcgatctttagaaactaagagagaatgaaactaacactaaa  9761000                                                                 <---------ICU4                                                              <---------ICU4                                                              --------->YAB1                        -           --------->AHL20(2)                                <---------ATHB12                  <-----    ----------->TBP                    <----------DOF2 --------->YAB1           <----------DOF2<-----  ------>ZmHOX2a(1)           <---------ICU4          <---------YAB1  <---------YAB1 --------->YAB1<-   attcctacaaaaaaaaaatgaaatcaacaccaaaattgctgcttttacttctgtttatcataaatcatcatgttgattcgggctctatcgtcaagtttct  9761100                                          --------->MYB52(2)    <----------DOF2                       <---------MYB46(3) --------->LBD16                          ----------->GT1 ------>NtERF2                     <---------LBD16 -------->LBD16                  <---------ARR14(2) ----ANAC58                      --------->ARR14(2)            --------->AHL20(1) ----ANAC58                   --------->ANAC46                --------->YAB1 --------LBD16       <----------DOF2 --------->LBD16   <----------DOF2                  <---------YAB1   tcccggctttgaaggccctcttcctttcgaactcgaaaccgggtttgttaaatctctcttttaaaaataatgtgttttgagtttggagttataagtattt  9761200                                                                                              <------                                                                                              -------               <---------TOE2(3)                                    ---------->DOF2           -------        <---------YAB1                     <---------ARR14(2)  <----------DOF2   --------->GLK1(1)      --------->At4g35610                  --------->ARR14(2)  <---------DAG2    <---------GLK1(1)      <---------At4g35610                 <------ZmHOX2a(1)    <---------------AGL15          <------  ------>ZmHOX2a(1)<-------TEIL     <------ZmHOX2a(1)          --------------->AGL15   ---------->DOF2   agtccttcttctgaatgaaggtacattggtattggtgaggaagaggatgtgcaattgttctactactttataaagtctgagagaaatccaaaagaagacc  9761300                                                              --------->YAB1                       --------->ZAT2                         ----------->GT1                      --------->ARR14(2)                <---------HSFB2a(2)                      <--- ---ARR14(2)          <---------ARR14(2)                --------->HSFB2a(2)                     ----- -->ARR14(2)         <------ZmHOX2a(1)                  --------->HSFC1(1)                     <----- -->ARR11(3)    --------->ALFIN1                   <----------DOF2         <----------DOF2     <----- ---ARR11(3)  <---------ANAC46          --------->ZAT6<-----------------AGL1               <---------   ctcttcttctctggttaagtggaggacctgggtgttcttctatcactggccttcttttcgagaatggtaatcttcttcttttttttgctcttgctctaag  9761400                          ----------->GT1                          <-------GAMYB                         <------MYB83                         <------MYB46(1)       <---------MYB52(1)                         ----------->GT1  <------ZmHOX2a(1)                       --------->ALFIN1 --------->MYB59                    --------->DAG2 --------->AHL20(2)                   ---------->DOF2 <---------AHL20(2)                 <----------DOF2   <---------AHL20(1)                          --------->ALFIN1 ---ZmHOX2a(1)  <---------ANAC58   --------->AHL20(1)                         --------->HSFC1(2) ---->ICU4      <---------ANAC46   --------->ARR11(3)          <---------TOE2(2) ----TOE2(3)    <---------ANAC58   <---------ARR11(3)          <---------TOE2(3) ----TOE1(3)<---------ANAC58      --------->AHL20(2)           <---------TOE1(2)        <----------DOF2 -DOF2      <---------ANAC58    --------->AHL20(2)  <----------DOF2           <---------HSFC1(2)   --   gattattttcaaaggcttgcttaaagtgggttaaaaatatattaggacccttggctttgaagtccaaggtttacaatggaagtgtcccttctttggtctc  9761500  Previous    Next  AGI:  At2g22920.1    Description:  SCPL12; serine carboxypeptidase. Identical to Serine carboxypeptidase-like 12 precursor (SCPL12) [Arabidopsis Thaliana] (GB:O81009;GB:Q3EBW1); similar to SCPL11, serine carboxypeptidase [Arabidopsis thaliana] (TAIR:AT2G22970.1); similar to SCPL11 [Arabidopsis thaliana] (TAIR:AT2G22970.3); similar to 1-O-acylglucose:anthocyanin-O-acyltransferase [Clitoria ternatea] (GB:BAF99695.1); contains InterPro domain Peptidase S10, serine carboxypeptidase; (InterPro:IPR001563) Range:  from: 9761018    to: 9764680    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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