Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------MYB46(3)             <---------ANAC58                  <---------ICU4             <---------ANAC55(2)     <------MYB83  ----------->GT1             <---------ANAC58        <---------DEAR3(2)                                             <             <---------ANAC46        <------MYB46(1)                                               --    ----------->GT1                 <---------DEAR3(1)                                            <--  <---------ANAC46              --------->DAG2 --------->ATHB12                          <----------DOF2  <---------ANAC58            ---------->DOF2 <---------ATHB12                      --------->At5g28300  <---------ANAC58          <---------HSFB2a(2)-------->ATHB1                     --------->ZAT6  ---   ggtagcgcgtaaatttcgtaaacaaatgttcgaaaaggtcggttttgaatcattggttatatcaaattgtagttttgtaatgtaacagtaacttttgtat  9748100             ---------->DOF2          --------->YAB1         <------ZmHOX2a(2)        --------->ARR11(3)        <---------ARR11(3)    --------->CCA1(2)                    <---------At4g35610                               <---------ANAC58  --------->YAB1           <---------ZAT14                                                 <---------ANAC58 ---------TOE2(3)          --------->ZAT14                                   --------->ANAC58 -------->DOF2--------->DAG2             --------->At4g35610                 --------->ANAC58 -------AHL20(2) <---------ZAT6         <---------YAB1          --------->LBD16--------->YAB1 ------>AHL20(2) ----------->GT1  <---------YAB1     <-------TEIL    --------->DAG2     <----------DOF2   ttaaagataagatcataaagtgttactactacagttctaattctgatgaaacaaattcatgaattgccgaaaaattggcaagaatagcttctttcttgct  9748200                                                                                              <------                                                    ----------->TGA1                          <------                                         --------->HSFB2a(2)                                ---------                                         <---------HSFB2a(2)                                <--------                                   <---------HSFC1(2)                                    ------>ZmHOX2a(1)                                   <---------HSFB2a(1)              ============================HOX2a_HOX2a                        --------->At4g35610 --------->ARR14(2)      <------ZmHOX2a(2)   --------->TOE2(3)                        <---------At4g35610 <---------ARR14(2)     <---------ARR11(3)   --------->TOE1(3)          <---------GLK1(2)        --------->HSFC1(2)              --------->ARR11(3) <---------YAB1       <---------WOX13(1)       ---------->DOF2     ----------->HVH21        --------->MYB52(1)  <---    <---------YAB1<------ZmHOX2a(1)--------->HSFB2a(1)         ---------->DOF2    <---------GLK1(2)   accatcttgatagattagcaggactaagcagagggaaagcttcccagaaccgagatgacgaaggtgaaagatcaaacgcgaacggattatccttagctgt  9748300                  <---------WRKY18(1)       --------->At4g35610                                             <---------MYB52(1)     --------->YAB1                                               ----------->RAV1(1) -----RAV1(1)<---------ARR11(3)                                 <---------ZAT18 ---MYB46(3) --------->ARR11(3)                                 --------->ZAT18    <---------MYB59 >At4g35610 --------->GLK1(1)              ------->TEIL      --------->At4g35610--------->ZAT14 -At4g35610 <---------GLK1(1)           <---------REM1(1)    <---------At4g35610<---------ZAT14 ------MYB46(3)<---------ICU4   --------->REM1(1)    <---------WRKY38(1)     --------->At4g35610   --   tgttgtatcatcagaaatcttgactggtttagcttcaacttgatgtacctcttgctcaacgtcttctgcaccagttagcctctgaactaactccttgaag  9748400                                                                                    --------->ANAC55(2)                                                                                    <---------ANAC58                                                                                    <---------ANAC46                                                                                   <---------LBD16                                                    <---------ANAC58             <---------SPL7                                                    <---------ANAC55(1)         <---------ANAC46                                                    <---------ANAC58            <---------ANAC58                                                    --------->ANAC55(2)      <--------P<-----------HVH21                                                    <---------ANAC46        <---------MYB52(1)                                  --------->At4g35610                       <-------GAMYB                                  ----------->RAV1(2)                      <---------DEAR3(2)                                  ------>ZmHOX2a(1) <---------ANAC55(2)   <---------ATERF1(2)                              ------->TEIL         <---------LBD16       <---------LBD16                            <-------TEIL         ----------->HVH21      ------------>AtMYB77                            <---------HSFC1(2)   <---------MYB52(1)  <----------DOF2<---------ANAC55(2)                            --------->HSFC1(2)  <-------GAMYB       <---------ANAC58<---------ANAC58                         <------ZmHOX2a(1)      <-----------HVH21   <---------ANAC58<---------ANAC55(1)                       <---------TOE2(3)   --------->ANAC58    <---------AtLEC2 <---------ANAC58 ------->MYB52(1)   <----------DOF2        --------->ANAC58 <-----------GT1<---------MYB46(3)     ---   ttaacaggctcgactctgtaaactttaggatgcatcctctgaggcaagcccgttacgggttttttccatggctttgccggttgcttacgggtcgaatgaa  9748500                                              --------->YAB1                                       ----------->HVH21                                 <---------ANAC58    --------->GLK1(2)                              <                                 <---------ANAC58  <---------HSFB2a(1)                      ---------        <---------YAB1          --------->HSFC1(2) <---------HSFC1(2)              --------->HSFC1(2)      --------->CCA1(2)         --------->At4g35610--------->HSFB2a(1)            <---------O2      <  <------ZmHOX2a(1)             <---------HSFC1(2) --------->HSFC1(2) --------->ATHB12 <---------ANAC58 ------>ALFIN1              <---------REM1(1)<------ZmHOX2a(2)       <---------ATHB12  <---------ANAC58   gtgaggagttatgagagaaacatggttgtgaagtagcttccatgacgatcagaagtttctgtaatacacaaatgatttgaagcgaagtgtcttaccttga  9748600                                               <---------YAB1        --------->REM1(2)                    <--------HAHB4        --------->ZAT18                      <---------ICU4        <---------ZAT18                     --------->ICU4        <---------ZAT14                --------->ANAC58        --------->ZAT14                --------->ANAC58      <---------------AtSPL8          --------->SPL7      --------------->AtSPL8          <---------ORA47(1)     <---------ANAC58               --------->ZAT18     <---------ANAC46            <---------ANAC46     <---------ANAC58            --------->ALFIN1    <---------WRKY12                            <--- <----------DOF2           <---------YAB1<------NtERF2<---------DOF5.7(2)    --------->ICU4  ------>ZmHOX2a(2) ---------ANAC58         <---------AHL20(2) <---------YAB1        <---------ANAC58         --------->ARR11(3) >TOE2(3) <---------ZAT14--------->YAB1--------->ANAC46           <---------ANAC58         <---------ARR11(3) ---------ANAC58       <-----------TBP--------->RAP2.6(3)         <---------ANAC46       <---------YAB1   tggctttgtgtgtacacatataagtatttataagtgtgtggacggcattattatgtcaacgttttgaagcgtgtaagtcattttgggttttatgatcttc  9748700                                                                                       --------->At4g35610                                                                                       <---------At4g35610                                                                                     --------->ZAT18                                                                                  <---------ANAC58                                                                                  <---------ANAC58         <---------ANAC58                                                       --------->ALFIN1         <---------ANAC58                                                      <-------MYC3    <---------At4g35610                                                        ------->MYC3  <---------RAP2.3(2)                                            <------------CBF<---------DEAR3(1)  <---------RAP2.6(2)                                     <-------TEIL        --------->O2         <- <---------LBD16                   --------->ATHB12   <---------YAB1          <---------O2        <-- -------DOF2          <----------DOF2                 --------->ICU4       <---------WRKY12      <---   ttttgcggcttacttggtttttgacttttaagtgaaatgaatgggaacgagatgggatgattcatggaattgaaatgtcaacgtgggtgtgctaactatt  9748800                                     --------------->AtSPL8                                ------------>CBF                               --------->ANAC58                               --------->ANAC58                        --------->At4g35610                        ----------->GT1                        <---------ANAC46                        <---------ANAC55(2)                        <------MYB46(1)                        <------MYB83 <---------ICU4                       --------->MYB52(2)           <---------AHL20(2)---------->DOF2     <---------ANAC58  --------->MYB59     <---------ANAC58  --------->MYB111(1)   <-----------GT1     --------->MYB111(2)   <---------AHL20(2)  --------->MYB46(2)                        ----------->GT1             -------- --------AHL20(2)     <---------MYB55(1) <-------TEIL  <---------TOE2(3)            ----------->HVH21 -------YAB1   <---------AHL20(2)   --------->ICU4     <---------TOE1(3)     --------->GLK1(2)  ----- ------AHL20(2)--------->AHL20(2)   <---------ATHB12  --------->MYB52(1) --------->YAB1<---------bZIP60(2)   tttattttcttgtttatttaaatgttaggtgaaaagcaatgagtacatttttggattaacgtagtttttgttaaaaaataatctagatgacatggcaacg  9748900                                                           --------->At4g35610                                                           <---------At4g35610                                                           <---------ZAT2                                                         <-----------RAV1(2)                                                        --------->TGA2(2)                           -                                                       --------->TOE2(3)                        <----                                <---------YAB1         <-----------HVH21                        <----                             --------->ICU4            <-----------TGA1                         <----                             <---------YAB1           --------->TGA1a                          <-----                           <--------HAHB4             <---------bZIP60(1)                      ------                           <---------ICU4             <---------TGA1a--------->AHL20(2)   --------->AHL20(2)                           --------->YAB1             --------->bZIP60(1)        --------->AHL20(2) -     --------->YAB1       <---------YAB1              --------->O2--------->AHL20(1)      <---------AHL20(2)   --------->ICU4         --------->ICU4            --------->MYB52(1)           <---------AHL20(2) < ->MYB52(1)        --------->YAB1--------->YAB1   <---------MYB52(2) <---------AHL20(2)  <----------- -->GAMYB         <-------TEIL<---------ICU4 ----------->GT1      <---------ARR11(3)    <------------   gtgtcattagtaacatggcattcatgtcatcattatcatcaaatatgtggtatctaacgtcagcagaatatataattttgcatataatttgataaattag  9749000  Previous    Next  AGI:  At2g22870.1    Description:  EMB2001 (EMBRYO DEFECTIVE 2001); GTP binding. Identical to GTP-binding protein At2g22870 [Arabidopsis Thaliana] (GB:O81004;GB:Q5XVD7); similar to GTP binding [Arabidopsis thaliana] (TAIR:AT5G11480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23922.1); contains InterPro domain GTP-binding; (InterPro:IPR005289); contains InterPro domain GTP-binding protein, HSR1-related; (InterPro:IPR002917) Range:  from: 9746537    to: 9748184    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g22880.1    Description:  VQ motif-containing protein. similar to VQ motif-containing protein [Arabidopsis thaliana] (TAIR:AT4G37710.1); similar to hypothetical protein OsI_037982 [Oryza sativa (indica cultivar-group)] (GB:EAY84023.1); contains InterPro domain VQ (InterPro:IPR008889) Range:  from: 9748199    to: 9748543    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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